Athalia rosae (coleseed sawfly): 105684826
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Entry
105684826 CDS
T09776
Name
(RefSeq) intermembrane lipid transfer protein Vps13 isoform X4
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
aroa
Athalia rosae (coleseed sawfly)
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aroa04131
]
105684826
Membrane trafficking [BR:
aroa04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
105684826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
Motif
Other DBs
NCBI-GeneID:
105684826
NCBI-ProteinID:
XP_012253900
LinkDB
All DBs
Position
2:14842788..14863527
Genome browser
AA seq
3277 aa
AA seq
DB search
MVFESVVAELLNKVLGDYVQNLDHKQLKLSLWGGDVVLKDLLIKDTALDKLDQPVKLAYG
RLGKLILKIPFKDMWNGQVDAIIEELYLLVVPCSQTQYDAEKEAKAELEAKQAEIARVEK
SKQQADVKNQEKLDDSMVEKLVARMIKNIHVEVKKIHVRYEDHTTFKDAPFSVGLTLSNF
TVESCNESWTTGGNLKDMHAIAQIFKLCTLDGLGVYLNPTFNQFSKQPQSEYSQLFSLGI
ATVDYKPVDYQYLLGPINANVKLKLNPKPETDGSNYTIPKVWMDAEMQKLKIGLSKIQYQ
TIMRLGEGLDRAQKAAPYKKYRPNLTSYRGHYKEWWQFAYTCILEETVRRCQKNWDWNHM
KLHRDTCRSYAKAYHAKLTNKKVAQEIVDHLTHCERILDVFNLVIIRQQIELEVERLAEK
EKDLKAKKGWFGFLWGSAPTEEEEDLNSAAAIMRKFEAAMTPQEKEKLYRAIDYQENSGT
THYPETYEDIDCRFFLHGLEVFVLDTEKEYPQVLDLQFNGVQVGFKSRPSGSGIMATASI
NDLKLLGVRQQDTVPVLLTSEGGYSDAVLFAVTYEKNPIDKLCGDRVIVKARSVQVIYDA
YTIIELVKVFRIQDTSTLNQLQAAAAMQLEGLKEMSALGLEYAIEKHSVLDIQVDLQASQ
LIIPRQGFYTGNESLFVLNLGSLKVNSLEKPKDSKATATVKQLVDMGKSEEDILTELRTH
SYDKFVMKIVNFQALVCLPNEDWHQTLLTSTVGAMTVLKPMTLEVQLDKCLIMDDPLLPK
MRIIGQLPSVALDISDSRLLEALSIAQSIPLPQNEDIPAPQPLSTKSVSQISLMKELSAI
PSMIEKKPNAPVKQTTNLEAKFVMKEFVLALSKQEGSVVDKSEPFLKVEVLKLEAELIQR
SFDQDVKLRLGGVQVTQYREKGEIHIIDTPMASGIEEYLIVVQHVTVNKLSPEFTTVHGS
VLQLLQMEFTKLDVLLHQEAIISVLQFVSNVQDRMAKTPQSSIENEDTAQTAYRLATIHE
DSLQFSNLGKEKLLKPTVNLRKKKRVVECIDLKIKAKVGSIGIKMANDVRDISAFFIEGI
VAGYIMKASYSQVNVNLASINVTDLNPISAYQNIISVTGTESLQVQAVIYNVEPWEVDKN
NMSIKVVMGCHRVVFLNSFVTGVMNFLNHFQAAQEAIKEASAAAAEAAKENMKDVQERAT
RIELAVKIKAPVVYIPTNSKSEHALMLDMGNLTVSNILKKLEIVNDEGNSPVIDEMKVDL
QDMKLSRVKLNTSDFVADNEVLLLQPVSFTLVIKRNLSTAWFTSIPDIDMSGRLNKIELL
ISQEDYGMMMKVLSENLGETIDDPAPDVATISKNVAVEDWNRHQSIKPDLEVMRHSKVKE
FKDSKQIHTVMKFEFIMDSLVVSLYTGGSKTLASKMSPMHLPENGLAKFSLSHFALKGRM
FGDGLLATSILLMNCTLDDTRPSRVGSLTRIMERISEPLQKDDSSPDKEVKSVRSMVDMT
LRKGTNDTFVDVRVFSFSIIVSLDYLMKIKDFFNVEQLSSNQNAAPVVQKGYNEVPGKKM
RPSGTVQPDTAMLTVNLHIEKPDIILVEDMDNIDSNCIVLNTELLLKLRMVGDHQAITGS
IKDMSILTGIYNPLRRSESIYQVLRPCSISLAGSTPEGKGLHVDICCTDIHVSVSPGVIE
MLNKVVQTVTKNQQVEDESVKVEPDYSGVWMITPFNENDYWFLKAETAVEAMEDLAFAEN
VEPDVIYKQELAIVTAPTILLTLEAGVGNKTLPMLLFYLGFQSNVNDWSTKTMSIECTMT
LAVAYYNSRLALWEPLIEPIECNENGKRSSTPWELKTKIQFNDLTVDSQSASVASPGTES
EPDLHQQTAKMCIDISSMENLEMTVTKTCLDVLKQLGNAFSNAIEPDKKQSLKIAPYLLK
NETGLSMTLHLENGHFKVVEDPTVATTSSSGSYTEVVLESGASVELAPTVMKSATTHLLQ
ELKAETVKINSDNKFIVSFKGLQNKLEIPVLRADKRFFPLKHRGDGADEWGIISDVVVED
GSTILTLRSVLQVHNHFSKPVSVYYMTKRGNEVECVGTVESDKCLNLPLDAVYTPTNELF
FSVEGYTVSIIPFIWKDLQKTVSMTKLLQCEARSRHEYVEPFYIKAVGEIEQVYFENTSR
HTMSSTVYNIHLYPSVYLKNFLPIDIIITLPGIPDEQLVEASKILQIPTIEPGRSSIVIK
LPQYLEKDWSCRVDIQGNPPEFSVCSFESYDSVQKVVMDLGMHTSFRHGSLIMALYCPFW
MLNKTGLMLSYRKSSKAAVKENSSPAKKWVSSLKPRRRHGDDGREKKKSSTEDNLNVLYH
PETYKGVILFSFNKKAFFGKKKAMVRVEDGAWSDKFSIDVAGSKGAVSCKYNGIIYQIGV
HNQLTYNSLTKQITFTPYYVLMNNSDFLIECQESERPADPLFKILPGECSSFWPRSEQAV
KTLKAKVAGHPEKTAAFIYTDVHTTLLKLDNKYGGINVDVQINEGGVYISMSGYTPGNAP
ALIINHTPHTINLWEKGSMNVRSIQSYNRMFYTWENPAGSRTLVWEDGSKKEIENDLRKD
NLGPFIAPDTEEEAFYVSFLDGTQRVLLFTTNFKIAEDCQLAGDLEVIDQEITLNIHGVG
MSLVNNISRKELLYMCIASSGVIWESQKSRGSRWRAFNTKDVITIEDGYQKYIRELQIGR
DPPYKVMLEPKLEVDYLNMEILKPHRRYIRRTFQTGLWVQHRASVHQVQLHAKINRLQID
NQLSDCVFPVILGPVPPPKSIAQDSVMKPFAEMSLVKRLLEHSTVQQFRYFKVLIQEFHI
KVDIQFIGAIMELFKDNETTDAEESELFRQDMKLVKEPLLYHVTLITTAEQKNFFDLLHF
SPLKIHISFSMTGGGAQLPQVLNVLLQGIGVTLTDINDIVFKLAYFEREYTFMPHNQLIS
EATSHYVGQAIKQAYVLVLGLDVIGNPYGLVVGTMKGIEDLFYEPFQGAIQGPGEFAEGL
LLGVRSMFGHTVGGMAGAVSKITGAMGKGIAALTFDKDYQRRRQEQLNKQPANLQEGLAR
SGKGLVMGVFDGVTGVVMKPISGAKEEGVEGFFKGFGKGMVGFVTRPAAGVIDFASGSLG
AVKRATELSEEVKRVRPPRFLQPDSLVRPYIQHDANGNKILFELEKGKYANTDIYVFHIE
VNKDVVLLTDKRIAFLKLSDLFGGWQVEWSYTWQEVNNAPRVTDRGVEVPVRETQKKKKL
GNLFGSTDHGKLILVPDFEIRKLLCSKIEEQINQSSS
NT seq
9834 nt
NT seq
+upstream
nt +downstream
nt
atggtttttgagtctgttgtcgctgaactccttaataaggtgttaggcgattatgttcaa
aatcttgatcacaaacagttaaaactcagcttatggggaggtgatgtagtcctgaaggat
ctgctgatcaaagacacagcgctcgataaacttgatcaacctgttaaattagcttacggc
cgcttggggaagttaatactgaagatcccattcaaggatatgtggaatggccaagtcgat
gctattattgaagaactctatctactggttgtgccatgcagccaaacacaatatgatgca
gaaaaagaagcaaaggcagagcttgaagctaagcaagcggaaattgcaagagtggaaaaa
tctaagcagcaggctgatgttaaaaatcaagaaaagttagatgattcaatggttgaaaaa
ttggttgcacgtatgataaagaacattcatgttgaagtgaaaaagatacatgtcaggtat
gaagatcacacaacattcaaggatgcacctttttccgttggtctcactctcagcaacttt
acagttgagagttgcaatgagtcctggacaacaggcggaaaccttaaggatatgcatgcc
attgcacaaatattcaaattatgcacattggatgggttaggagtatatctgaatccaacg
ttcaatcagttcagtaaacagcctcaatcggaatacagtcaacttttttcgttaggaatt
gctactgttgactacaaacctgttgattaccagtatttgttgggaccaataaatgctaac
gtgaaattgaaattgaatccaaaacctgaaacggatggaagcaattacacgattcccaaa
gtgtggatggatgcagaaatgcaaaagttgaaaattggattgagcaagattcaataccaa
acaataatgcgattgggtgaagggttggacagagcacaaaaggctgccccatacaaaaaa
tataggccaaatttaacatcgtatagaggccattacaaagaatggtggcagtttgcctat
acctgcattttggaagaaacagtgcgcaggtgtcaaaaaaattgggattggaatcatatg
aaactgcacagggacacgtgtcgtagttatgccaaagcttatcatgcaaaactaactaat
aaaaaagtagcccaagaaattgtggatcaccttacgcattgtgagcggattttggatgtc
ttcaatttggttattattcgacaacaaatcgaactcgaggtagaacgccttgcagagaag
gagaaagatctcaaggcaaaaaaaggatggtttggctttttgtggggaagtgcgccgacg
gaagaagaagaggatctcaattcagcagcagccatcatgcgcaagttcgaggcagcgatg
actccacaggagaaagagaagttatatcgagccattgattaccaagaaaatagtggcacc
acacattatccagaaacatacgaggatattgattgccgcttctttttacatggcctcgag
gtttttgttctggatactgaaaaagaatatccgcaagtcctagacctacagttcaacggt
gttcaagttggcttcaaatctcggccttctggtagtggcatcatggctactgcatcaatt
aatgacttaaagctgctcggtgtcaggcaacaggacacagtgcctgtcttattaacgtca
gaaggaggttattctgatgctgtattatttgctgtaacttatgaaaaaaatcctattgac
aagttgtgtggggatcgtgtgatagtcaaggctagatccgttcaagtcatttatgatgcc
tataccatcatagaactagtgaaagttttcagaatacaggatacttccacattgaatcaa
ctccaggctgccgctgccatgcaattggagggcttgaaagaaatgtcagcattaggtctg
gaatatgctatcgaaaagcattcagtactagatattcaggtcgacctacaagcatctcaa
ctaattattccccggcaaggtttttacacaggcaatgaatcactgttcgttcttaacttg
ggtagtctgaaagttaattccctggaaaaaccaaaagatagtaaagccactgccactgtt
aaacaattggttgacatgggaaaatcagaagaagatattttgacagaactacggacgcac
agttatgacaaatttgtcatgaaaatagtaaacttccaggcacttgtctgtttgccaaat
gaagattggcaccaaactttactgactagcacagtaggagctatgacggtgttgaagcca
atgaccttagaggttcaacttgacaagtgtttgattatggatgatcccctgctccctaaa
atgagaattataggacaactcccatctgtagcccttgacatatctgattcaagattgcta
gaagctctttcaattgcacaaagcattcccttaccgcagaacgaagacatccctgctccg
caaccgttaagtacaaaatcagtttctcagatatctttgatgaaagaattatctgcaatc
cctagtatgattgaaaagaagccaaacgctcctgtgaagcaaacaacaaatttagaagca
aagtttgttatgaaggaatttgttcttgctctttcgaaacaagaaggctcagttgtagac
aaatcagagccattccttaaagtggaagtattaaaattagaagctgagttgattcagcgt
tcatttgatcaagatgtgaagctgagacttggtggtgtgcaagtcacacaatatcgtgaa
aaaggagagatacatattatagatactccaatggctagtggcattgaagaatatcttatt
gttgttcaacatgtaactgtcaataaactttctccagaattcacaacagttcatggttct
gttcttcagttattacagatggaatttactaagttagatgtgttgcttcatcaagaagca
atcatcagcgtccttcaatttgtttccaatgtacaggacaggatggctaagactcctcaa
tcaagtattgagaatgaagataccgcacaaacggcatatcgacttgcaacaatccatgaa
gattcacttcagttctccaatcttgggaaagaaaaacttctgaagcctacagttaattta
cggaagaaaaaacgagtagttgaatgtatagatctcaagatcaaggcaaaagttgggtca
ataggtataaaaatggcgaatgatgtcagggatatcagcgcttttttcatagaaggaatt
gttgccggttatattatgaaagcttcttattcacaagtaaatgtgaatctggcttcgatc
aatgttacagacctcaacccaatatctgcttatcaaaatataatctctgtgacaggaaca
gagtcgttacaagttcaagctgtaatatataacgtcgaaccatgggaggttgataaaaat
aacatgtctattaaagtagttatgggctgtcatcgagtagtatttttgaactcttttgta
actggagttatgaattttttgaatcatttccaagcagcacaagaagctattaaagaagcc
tcagctgctgctgctgaagctgcaaaagaaaatatgaaagatgtgcaggaacgagctact
cgcattgaattagctgttaaaatcaaggccccagtagtgtatataccaacaaactctaag
agtgaacatgctctaatgcttgatatgggtaatttaacagtatccaacattttgaagaag
ttagaaattgttaatgatgaaggcaattctcctgtaatcgatgaaatgaaagttgatctg
caagatatgaaactatcaagggtcaaactgaacacaagtgactttgttgctgataacgaa
gtgctattgctgcaacctgtcagtttcactcttgtcatcaaacgaaatttatctacggca
tggtttacttccattcctgatatcgatatgtctggtagactgaataaaattgaacttttg
attagtcaggaagattatggaatgatgatgaaagttttgagtgaaaatttaggggaaacc
attgatgatcctgcacctgatgttgctactatttccaaaaacgtggctgtcgaggattgg
aatagacatcaatcaattaagccagatttggaagttatgaggcacagcaaagtgaaagaa
tttaaagattcaaaacagattcatactgtaatgaaatttgaattcatcatggatagttta
gtagtcagcttatatactggaggatcgaagacgcttgcgtctaaaatgtctccaatgcat
ctacccgaaaacggattggcaaagtttagtttgtctcattttgctttgaaagggcgaatg
tttggtgatggtttgttggctacttctattttgttgatgaattgcacattggatgataca
agacccagcagggtgggttctctcacaagaataatggaaaggatcagtgaaccactccag
aaggatgattcaagtcctgataaggaagttaaatcagttcgaagtatggtggatatgact
ttgcgcaaaggaacaaatgatacctttgttgatgtccgcgtattctcattcagcataata
gtatcattagactatcttatgaagataaaggatttcttcaacgtagagcagttgtcatca
aatcaaaatgctgcacccgttgtgcaaaaaggttacaatgaagtacctggtaaaaaaatg
agaccgtcagggactgtccaacctgatactgccatgcttacagtcaatctccatattgaa
aaaccagatattattcttgttgaagatatggataacattgattctaactgcattgtatta
aatacggagctcttattaaaattaagaatggtgggtgatcatcaagctatcacgggatcg
atcaaagatatgtccatcctcactggaatttacaatcctctacggagatcggaatcaatt
tatcaggtgttgagaccatgtagcattagcttggcaggttctacgccagaaggaaaaggt
ttacatgttgacatatgctgcactgacatacacgtttctgtttctccaggcgttattgag
atgttaaacaaagtcgttcagactgtcacaaagaatcaacaggttgaagatgagtcagtg
aaggtggaaccagattacagtggagtttggatgattactccatttaatgaaaatgattat
tggtttctcaaagcagaaacggccgttgaagcaatggaagatcttgcatttgcggaaaat
gtagaaccagatgtaatttataaacaagaactcgctattgtaaccgctcccactattctc
ctaactttggaagctggtgttggcaataaaactctacctatgctattgttttatctgggc
ttccagagtaatgtaaatgactggagcacgaagactatgagcattgagtgtactatgact
ttagctgtggcatattataatagtcgtcttgctttatgggagccactgatagaacctata
gaatgtaatgaaaatggaaaacgtagttcaacaccgtgggaactcaaaactaagattcaa
tttaatgacctcacggttgattcgcaatctgcaagtgtcgctagtcctggtacagaaagt
gaaccagatttacatcagcagacagcgaaaatgtgtatagacatctcatcaatggaaaac
ttggaaatgacagtcactaaaacgtgcctcgacgttcttaagcaactgggtaatgcattt
tcgaatgctattgaacctgacaaaaaacaaagtcttaaaatagctccatatctgttgaag
aatgagactggcttatccatgaccttacatctcgagaacggtcattttaaagttgtcgaa
gatccaacagtagctacaacgtctagttctggatcttatacagaagtagtgcttgagtct
ggagcatcggtagaattggcacctacagttatgaaatctgcaacaactcatctcctccaa
gaacttaaagctgaaactgtcaaaattaacagtgataacaagttcatcgtatcgttcaaa
ggtctccagaacaagttagaaattccagtgcttcgtgcagataagaggttctttccctta
aagcatcgtggggatggagcagacgaatggggtatcatttctgacgtagttgttgaggat
ggaagcactatcctcactctaagaagtgtgctgcaggtacataatcacttcagcaaaccg
gtatcagtatattacatgacgaaacgcggtaatgaagtggaatgtgtgggcactgtagaa
tctgacaagtgtctcaatcttccattagatgctgtgtatacgccaacaaatgagttattc
ttcagtgttgaagggtacacggtttcgataattccattcatatggaaagatcttcaaaaa
acagtttctatgactaagttactgcaatgcgaggccagatctcgccacgaatacgttgag
ccgttttacatcaaggcagttggagaaattgaacaagtttactttgagaatacaagtaga
cacactatgtcaagtacagtatataatattcatttatatccatcggtatatttgaaaaac
ttcctaccaatagatattattatcacattacctggtattccggacgaacaactcgtagaa
gctagtaaaatactacaaattcctacaatcgagcctggaagatccagtatcgttattaag
ttaccacagtatttggaaaaggactggtcatgtagagtggacatccaagggaacccacct
gagttttcagtttgttcattcgaatcatatgacagtgtgcaaaaggtggttatggactta
ggaatgcacacatctttcagacatggttcacttatcatggcattatactgccccttctgg
atgttgaacaaaactggacttatgttgtcctacaggaaatcgagtaaagcagcagtcaaa
gaaaattcaagtcctgctaagaaatgggtttccagtttaaaacctcgtcgtcgccatggt
gacgatggcagggaaaagaaaaaatcgagtacggaggacaatttgaacgttctttatcat
cctgagacctacaaaggagtaatcctattttcctttaataaaaaggcattttttggcaaa
aaaaaagctatggtcagagttgaagatggagcatggtcggacaaattctctattgatgtt
gcaggaagcaagggggcagtttcttgtaaatacaatggcattatttaccagatcggtgtt
cataaccagctaacatataattcattaacgaaacaaatcacatttaccccgtattacgta
ctgatgaataattctgacttccttattgaatgtcaagaaagtgagcggcctgcagaccct
ctgtttaagattttgcccggtgaatgttcttcattttggccacgttccgaacaagctgta
aaaactttgaaagcaaaggttgcagggcatcctgaaaaaactgcagcttttatctacact
gatgttcatactacattgttgaagcttgacaataagtatggtgggattaacgttgatgta
caaattaatgaaggtggagtgtacatctccatgtccggttatactccaggaaacgcacct
gctttaataatcaatcatactccgcatactatcaacctttgggaaaaaggatctatgaac
gttagatccattcaatcatacaaccgaatgttctacacgtgggagaatcctgcgggttca
agaacattagtttgggaagacggcagtaaaaaagaaatcgaaaatgatcttcgaaaggat
aatttagggccatttatcgcaccggacacagaagaagaggcattttatgtttcattcctt
gatggtactcaacgtgttctactattcactacgaatttcaaaatagctgaagactgccag
ttggctggggatcttgaagttatcgatcaagaaattaccctaaatattcatggtgttggg
atgtcgttggtgaacaacattagtagaaaggaacttctatacatgtgtattgctagctct
ggggtcatttgggaatcacaaaaatctcgtggaagtcgatggcgtgcattcaatacaaaa
gatgttattaccattgaagatggttaccaaaagtatattcgtgaacttcaaattggcagg
gatccaccctacaaggtcatgctggaacccaaactagaggtggattatctgaacatggag
atattgaaaccccatcggagatatattcgccggactttccaaactggattatgggttcag
catcgtgcatctgtacatcaagtacagctgcatgcaaaaataaaccgtctgcagattgat
aatcaactttctgattgcgtatttccagtaatattgggtccagttccacctccaaagagt
atcgctcaggattctgtcatgaagccgtttgcagaaatgagtttggtgaaacgattactc
gaacatagtactgtacaacaattcagatatttcaaggtactcattcaagagttccatatc
aaagtcgatattcaatttattggtgccatcatggagttattcaaagacaatgagactact
gacgccgaagagagtgaattgttccgacaagacatgaagttggtgaaagagcctttgctg
tatcatgtgactttaataacaacagctgaacaaaagaacttctttgacttgctccacttt
tcaccacttaagattcatattagtttttcaatgactggaggaggggcacagttgccacaa
gtgctaaatgtattgttacaaggaattggtgttactctgacagatatcaatgatattgtg
ttcaaattagcatatttcgagagagagtatacatttatgccccacaatcaactaatatcc
gaggcgacaagtcattatgtgggtcaggcaatcaaacaagcgtacgttctagtcttgggc
ttggatgtcattgggaatccgtatggtttggttgttggcacaatgaaaggcatcgaagat
ttattctatgaaccgtttcaaggggcaattcagggtcctggtgaatttgcagaaggttta
ttgcttggcgtcagaagtatgttcggacatactgtcggtggtatggctggcgctgtttcc
aaaatcactggagcaatgggtaagggtatcgctgctctcacatttgataaagattatcaa
cgtagaaggcaagaacagttgaacaaacaaccagcaaatttgcaagaaggacttgcacga
agtggtaaaggtctcgtcatgggggtatttgatggagtgactggagttgtcatgaagcca
atatcaggtgcaaaagaagaaggtgtcgaaggatttttcaaaggatttggaaaaggtatg
gttggatttgtcacacgaccggctgctggagttattgattttgccagtggttcgttaggc
gctgttaaacgggccacggaattgagtgaagaagtcaaaagagttcgaccaccaagattc
ttacaacctgacagtcttgttagaccttatattcaacacgatgccaatggaaacaaaatc
ctttttgaattggagaaaggaaagtatgccaataccgacatttatgtctttcatattgaa
gtaaacaaggatgtggttcttcttactgacaaacgtatagcctttcttaaacttagtgat
ctatttggtggatggcaggttgaatggtcttacacgtggcaagaagtaaacaatgcccca
agagtaactgataggggagtagaagttcctgtgcgagaaactcagaagaagaagaaactt
ggtaacttatttggtagcaccgatcacggcaagctcatattagttccggattttgaaatc
agaaagttactatgcagcaaaattgaggagcaaatcaatcaaagttcatcgtga
DBGET
integrated database retrieval system
