Athalia rosae (coleseed sawfly): 105684872
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Entry
105684872 CDS
T09776
Name
(RefSeq) nuclear pore complex protein Nup54
KO
K14308
nuclear pore complex protein Nup54
Organism
aroa
Athalia rosae (coleseed sawfly)
Pathway
aroa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105684872
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aroa03019
]
105684872
Messenger RNA biogenesis [BR:
aroa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105684872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
DUF4653
Motif
Other DBs
NCBI-GeneID:
105684872
NCBI-ProteinID:
XP_012253985
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All DBs
Position
2:14760709..14766043
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AA seq
609 aa
AA seq
DB search
MSFGTGFGTSTPAAAPNFGFGTPSSTAATPAKPTGFGTPSFGFGTPATSAPAFGAFGTPA
TQTPAFGTSSGFGTLGAVGFGTPTTSSITFGTPTSTFGFGTAGGFGSTPATASTGFSGFG
TTTTTSSTGFSGFGGFPTTATSSAPSMFSSFAAPSTSTTGFGTSSGFGGFGTKPAITSTT
GFGSSGGGTVLPGFTSTLTQPHQQQLQQLQQQQQQQSVNTISEALYNAVFNCQIFNDERD
NTIARWNLIQALWGTGKAYYSLSGPPIELTQENPLCRFKAIGYSRMPEADNNEGLVVICF
NKKESELKEGKQGLITSLNGILGNRSNLTITVHGIKSIGEKKSQITVCTSEKGITGLPRK
IPANELVSYFMQPMQKQQLAQLGVENIFPQVKLDPIQLKEYLDNPPSCIDPRLWKQAQLD
NPNPEKYIPVPMIGFNQVQYRLKCQEEETVKHRAFLDMAAERIQGLQRQHIATQARLKEH
RRTLLELQHRVLQVLVRQEITRKVGLALQSEEEVLTNRFEAMHSQISAPTQFKGRISEML
SQLRMRRHMDSQNHERYTMDPIAQDDIKTYLSMEQQGMAQLIATINADLECLKIIKDGMS
DLLTGHSIS
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttgggaccggctttggaacttcaactcccgctgcagctcccaattttggattt
ggtacgcccagttccactgcagctaccccggctaaaccgactgggtttgggacaccatcg
tttggctttggtacaccagctacttcagctccagcattcggggcatttggtactccagca
acccagacgcctgcttttggaaccagcagtggattcggaactttaggagcagtgggattt
ggtacccccaccacaagctcgataacatttggtactccaacttcaacttttggctttggc
acagctggaggatttggaagtacaccggcaacggcatcaacgggatttagtggatttgga
acaactacgactacaagttcaacaggctttagtggatttggtggatttccaaccacagca
acttcttcagcacctagtatgttttctagttttgccgctccatctacaagcacaacagga
tttggaacatcatccggttttggaggatttggcactaaaccagcaataaccagtactacc
ggatttggtagctcgggaggaggaactgtacttcccgggttcacatcaactttaactcaa
cctcaccagcagcaacttcagcaacttcagcagcaacagcagcaacaatctgtgaatacg
atatcagaagcactttacaacgcagtatttaactgccaaatattcaatgacgaacgtgat
aatactatcgcaagatggaacttgatccaagccttatggggaactggaaaagcatactat
tcgctatcaggaccccctatagaattgacccaagaaaatcccttgtgcagattcaaagca
attggatatagccgtatgccagaagcggataataatgaagggttggtcgttatttgtttt
aacaagaaggaaagtgaattgaaagaaggaaaacaggggctaattacatctcttaacggt
atattgggaaatagatcaaatttaacaataaccgtacatggtataaagtctattggtgag
aaaaagagccagataacggtctgtacatcagagaaaggtatcacgggactgccaagaaaa
ataccagcaaatgaattggtgagttatttcatgcaacctatgcaaaaacaacaacttgcc
cagcttggcgtggaaaatatttttccacaagtcaaactggaccctattcagctgaaagag
tacttggataatccaccatcgtgtatcgatccaagattatggaaacaagcgcaactggat
aatccaaatcctgagaagtatattccggtgcctatgattggtttcaatcaagttcaatat
agactgaaatgccaagaagaagaaactgttaaacacagagcatttcttgacatggcagct
gaaagaatacaaggcttgcaaagacagcatattgcaacgcaggcacggttgaaagaacat
cgaagaacgctccttgaactgcaacatagggtcttacaggtacttgtgcggcaagaaata
acgagaaaagtcggtcttgcattgcagtcagaagaagaagtattaacaaataggtttgaa
gcgatgcactcacaaataagtgctccgacacagttcaaaggcagaataagcgaaatgtta
tcccaattgagaatgaggcggcacatggattcgcagaaccatgaacgatatactatggat
cctatcgcacaagatgacattaaaacttatttgagtatggaacagcaaggaatggctcaa
ctaattgcaactataaatgccgatctggagtgcctgaaaataattaaagatggtatgtct
gacctcctcaccgggcatagcatctcctga
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