Athalia rosae (coleseed sawfly): 105684943
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Entry
105684943 CDS
T09776
Name
(RefSeq) tubby-related protein 4 isoform X1
KO
K24720
tubby-related protein 4
Organism
aroa
Athalia rosae (coleseed sawfly)
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
aroa04990
]
105684943
Domain-containing proteins not elsewhere classified [BR:
aroa04990
]
Other domain-containing proteins
Tubby family proteins
105684943
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR35_TULP_N
Tub
Beta-prop_WDR19_1st
WD40_CDC20-Fz
Beta-prop_WDR5
ANAPC4_WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
SOCS_box
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_IFT140_1st
Beta-prop_Aladin
WD40_Prp19
Beta-prop_HPS5
SAP
Beta-prop_EML
Beta-prop_ACSF4
Beta-prop_CAF1B_HIR1
DUF3527
Beta-prop_RIG_2nd
Beta-prop_ELP1_1st
Beta-prop_WDR3_2nd
Motif
Other DBs
NCBI-GeneID:
105684943
NCBI-ProteinID:
XP_012254118
LinkDB
All DBs
Position
2:complement(17765392..17812485)
Genome browser
AA seq
1390 aa
AA seq
DB search
MHLHFEKNNNAKCDCNILSLSWMGKVPDELPEDEGWKLNRTNYYQEGWLATGNARGLVGV
TFTTSHCRTRAAELPLRTNYNLRGHRSEVILVKWNEPYQKLASCDSSGVIFVWIKYEGRW
SIELINDRSTPVTYFSWSHDGRMALICYQDGFVLVGSVAGQRYWSSMLNDQATITCGIWT
PDDQQVYFGTTAGQLIVMDVHGAMVSEVQLAAAVTSMAWSAEKFKMEEGDDDITGSQCQQ
DERSYVLAVCLADGNIVLLRSFDDVSPVTIRTGLKSPLLAEWSNSRKLLAVAGIKDADIF
QGNPQEYINLLHFYSDTGILVYTTAIPYTQCPVSALTWGHNDRRLFVATGARVHAAWVSR
RVGSLQLLSRLAVRAALSRESSVQQLPLPPRLRALVAALFASTIRCCVPEPRELRRFVSR
PPPGGGRLHCTMLRHAGEPAPCYTLYLEYLGGLVPLLKGRRTSKIRPEFVIFDPQNQETM
HTPDYPTHYQTYSDGSDTERDTADLCGSPRNRRKNRRRREEKPVEEVDDLAYVDTLPEHA
RLVEVTSNIWGTKFKIHGLTDSVPANLGQVTYRTSLLHLQPRQMTLVMTELRDDLPAGPD
PTFNPNLFSEDEEEVFQEPQGTSRGTAEVQPPPIAPMTPRNSRLNTNRPKSQISNQFITS
EALSPALARAESYEDEFSYVDLQDMVSFCENLRATSGNTYRTPPRHNAPRCCDVPTLQSP
KNAVAPTQTLIATSNPNTDYTGNIQRVKTALADQQTNMATKKDIENNKMNQISDEKSTLT
ANSGNVISLSNQSGQITAGGNLGSGSCSPSTIINGLNNPGNCSQSQSIFLNGLNSIGASS
GVLSTSSTLQISNAQMGQISVHSKNNLNIGTITSGSTGVDCSNAVTNPPHVCSTPTCSKP
ANSKSTITNLNGLCNGSISPTCSNQFHVAQSQTNSPSQCQLMLNQSNGGQLNSKRKETKP
QGCCGKSIPSGNQIGIAPGKSEELRYIDEENSLEGTTQFRSVHRTPTVVSIGPLCLADPI
VRSCSVGYLDLVDAQLVPCEVALRMLRKEAPNKRLVLVSRKTRKKRKNKPQADVAQPNTK
PPRLKSCGKSRSLDSSDIFPSTEQIASVPQLPEHLEELSNTDVTENKANIETATDSVDLG
VPEGKPKVINDDAAIQEPQQIIAPGKPTRLEACSSPARASSPSGSVASSLDGLAARLRDF
DESHSLPPPSPRPTSRLPRSSPSSPAPSKKGKRPASASPIRRRLLSSPLLSRRSRKSRGE
SSDDEGLTQDESSKNYRDLETFQKAQLRQKLKQRGAGSSGHKADLLNRREELRMHNKAPM
WNESSQVYQLDFGGRVTQESAKNFQIEFRGKQVMQFGRIDGNAYTLDFQYPFSALQAFAV
ALANVTQRLK
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atgcatttgcattttgaaaaaaataataacgccaagtgtgactgcaacatcctgtctctc
agctggatgggaaaagtaccagacgaacttcctgaggacgagggatggaagctgaaccgc
acaaattactaccaagaaggttggctggcgacgggaaacgctaggggcctggtgggagta
acttttactacgtcgcattgcagaacaagggctgccgagttgccgcttcgaaccaactat
aacctcaggggccacagaagcgaggtaatattggtgaagtggaacgaaccctaccagaaa
ttggcctcctgcgatagttccggagtgattttcgtctggataaaatatgaaggaaggtgg
agtatagagctgatcaatgatcggagtacaccagtcacgtatttttcctggtcccacgac
ggaaggatggccctcatatgttaccaggatggcttcgtcctagttggcagcgttgccggc
caaaggtattggtcctcgatgctaaatgatcaggcgactatcacatgcgggatatggact
ccggatgatcagcaggtctattttggaacgacagctggtcagttgatagtgatggatgtc
cacggagccatggtatcagaagttcaattagcggcagcggtcacatcgatggcctggagt
gccgaaaaattcaaaatggaagaaggagacgatgatattaccggaagtcaatgccagcaa
gacgaacggagttacgtgttggcggtatgtctcgccgatggaaatatcgtccttttacga
tcctttgacgacgtatctcccgtcacgatacgtacaggattgaaatccccactactggct
gagtggagtaactcgagaaagttattggcagtcgccggtatcaaagatgccgacattttt
caaggcaatccccaagagtacataaacttattgcacttttactcggacaccggcattctc
gtctacaccacagctataccgtacacacaatgtcctgtgtcggccctaacgtggggccac
aacgacagaagattgttcgtggctacaggggcgagggtgcacgctgcatgggtctctagg
cgagtaggttctctgcagttgctgtcacggctcgccgttcgcgctgctttatcgagggaa
tccagcgtgcaacaattacctctacctccaagactgagagccttagtagccgcccttttt
gccagtacgataagatgttgcgttcccgagcccagagaactcaggcgtttcgtatcaaga
ccacctccgggtggtgggcgccttcattgtacgatgctaagacacgcgggggaacctgct
ccttgttacactctatatttggagtacctcggagggctggtacctctgctgaaagggaga
agaaccagcaaaatacgaccggagtttgtgatattcgatccgcaaaaccaagaaacgatg
cacacgcccgactatcccacgcactaccagacttacagcgatggttctgacacggaaagg
gataccgcagatttatgtggctctccgagaaataggagaaaaaacagaagaaggcgagag
gaaaaacctgtggaagaagttgacgacctggcctacgtggacacgctccccgagcacgca
agattagtggaagtgacgtcgaacatttggggaacaaaattcaagatacatggactgacg
gactctgttccagcgaatttaggacaagttacgtacaggacgtcccttttgcatttacag
ccgcgacaaatgacgttggtaatgaccgaattgagagacgatttgccggcaggtcccgac
ccgacgtttaacccaaacctattttcggaggatgaagaagaagtgttccaagagccgcaa
ggaacttcgcggggaacggcggaggtccagccgcccccgatcgcgccaatgacgccgaga
aattctcggttaaatacaaatcgtccaaaatcccaaatttctaatcaattcataacgtcc
gaagcgctctcgcccgcgcttgcacgtgccgaaagttacgaggatgaattttcgtacgtt
gatttacaagacatggttagtttttgtgaaaatctcagagctacgtccggaaatacatac
agaacaccaccgcgacataacgcgccaaggtgttgcgacgtgcctacgttacagtcgcct
aaaaacgccgttgcaccgacgcaaacactgatagccacatcgaatccgaatacggattac
acggggaatattcagagggtaaaaacggccctggccgatcagcaaaccaatatggctacg
aaaaaagacattgagaataacaaaatgaaccagatatccgacgaaaaatcaacgctcact
gccaattccggtaacgtaatttctctttctaatcagagcgggcaaattaccgcgggaggc
aatttgggttcgggttcatgttcaccgagtacaataataaacggcttaaacaaccctggg
aattgctcacagtcacagtccatatttttaaacggattaaacagcataggagcctcgagc
ggcgtcttatctacgtcgtccacgctccaaatttctaacgctcagatgggtcaaatttcg
gtacattccaaaaataatttaaacatcggtacaataacgagcggttcaaccggggtagac
tgttcaaatgctgttaccaaccctcctcacgtatgcagtacgccaacgtgttcgaaaccg
gcaaattcaaaaagcacaattacgaatttaaacgggctttgtaacggttctatttcgccg
acgtgttcgaatcaattccacgttgctcagagtcaaacgaattccccgtcccaatgtcaa
ctgatgttgaaccaatcgaacggcggacaattaaactctaaaagaaaagaaaccaagccg
caaggctgttgcggaaagtcgataccgagtgggaatcagattggaatagcaccaggcaag
tcggaggaactgcgttacatcgacgaagaaaattctttggaagggactacccagttccga
agtgttcacaggactccgaccgtcgtcagcatcggaccactctgcctcgcggatccaatc
gtccgaagttgtagcgtcggctacctggatttggtcgacgcacagctcgtgccttgcgag
gtggctttgaggatgctgaggaaagaagcaccgaacaaaagactggttctagtgtcccgc
aaaacaagaaaaaaacggaagaacaaaccccaggcggacgtcgcgcagccaaacacaaaa
ccaccgcgattgaaaagctgtggtaaatcacggagcttagattctagtgatatttttccg
agtaccgaacagatcgcctcagtgcctcagctgcccgaacatttggaagaactttcgaac
acggacgtcacagaaaacaaagcaaacattgaaaccgccacagactccgttgacctcggt
gttcccgaaggaaagccaaaggtcatcaacgatgacgccgcaattcaggaaccgcagcaa
ataatcgctcccgggaaacccaccagattagaagcctgctcgtcgccagctagagcgtct
agtccaagtggttcagtagcgtcttcattggacggactcgcagccagacttagagatttc
gacgaaagtcattctttgccaccaccctcgccaaggccaacttcaagactgcccagaagt
tcgccaagcagtccggcaccatcgaaaaaaggaaaacgaccggcatccgcatccccgatc
aggcgtagacttttgtccagcccgttgttgagcagacggagccgtaaaagtcgcggcgaa
agttccgacgacgaaggattaacccaagatgaatcgtcgaagaattatcgcgatttggaa
accttccagaaggcccaactccgtcaaaagttgaaacagcgtggcgccggatcgtcgggt
cataaagcagatttgctcaatagacgagaagaactccgaatgcacaacaaggctcccatg
tggaacgagtccagccaagtgtaccagctggactttggtggtagagtaacgcaagaaagc
gcgaaaaatttccaaattgaattcaggggcaagcaggtgatgcaattcggacggatagac
gggaacgcctacaccttggatttccaatatccattcagtgcactacaggccttcgccgtg
gcactcgcaaatgttacacagcggctcaagtaa
DBGET
integrated database retrieval system