Athalia rosae (coleseed sawfly): 105685306
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Entry
105685306 CDS
T09776
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
aroa
Athalia rosae (coleseed sawfly)
Pathway
aroa03013
Nucleocytoplasmic transport
aroa03015
mRNA surveillance pathway
aroa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105685306
09122 Translation
03013 Nucleocytoplasmic transport
105685306
03015 mRNA surveillance pathway
105685306
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aroa03019
]
105685306
03041 Spliceosome [BR:
aroa03041
]
105685306
03009 Ribosome biogenesis [BR:
aroa03009
]
105685306
03012 Translation factors [BR:
aroa03012
]
105685306
Enzymes [BR:
aroa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105685306
Messenger RNA biogenesis [BR:
aroa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
105685306
mRNA cycle factors
Stress granule specific factors
105685306
Spliceosome [BR:
aroa03041
]
Complex C
Other components
EJC/TREX
105685306
Ribosome biogenesis [BR:
aroa03009
]
Eukaryotic type
90S particles
Helicases
105685306
Translation factors [BR:
aroa03012
]
Eukaryotic type
Initiation factors
eIF-4
105685306
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_22
UvrD-helicase
AAA_30
TniB
Utp25_C
Motif
Other DBs
NCBI-GeneID:
105685306
NCBI-ProteinID:
XP_012254705
LinkDB
All DBs
Position
3
Genome browser
AA seq
403 aa
AA seq
DB search
MAEPKSRRVAQTEDLSNVEFETSEDVEVIPTFDNMGLRDELLRGIYAYGFEKPSAIQQRS
IKPIMKGRDVIAQAQSGTGKTATFSIAILQSLDTQVRETQVLCLSPTRELATQIQKVILA
LGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIKRRVLRTRAIKMLVLDE
SDEMLNKGFKEQIYDVYRYLPPATQVVLVSATLPHEILEMTSKFMTDPIRILVKRDELTL
EGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVCSMH
GDMPQKERDNIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRS
GRFGRKGVSINFVKTDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggcggagccgaagtcgcgccgtgttgcccaaacagaagatttgtctaacgtagagttt
gaaaccagtgaagatgtcgaagttatcccaacgtttgataatatggggcttcgcgacgaa
ctcctgcgaggaatttatgcctatggatttgaaaaaccctcggcaatccaacaaagatcc
attaagcccataatgaaaggaagggacgtaattgcccaggctcaatctggaacgggtaaa
acagccactttctcaatagcgattctacagtcattagacacgcaagttcgggagacccag
gtactctgcttgtcacctacccgtgaacttgcaacccaaatccaaaaagtaatcctagct
ctcggcgattttatgaatgtacaatgccatgcctgtatcggtggaaccaatcttggagaa
gatatcagaaaattggactatgggcaacatgttgtctctggaaccccaggacgagtgttc
gacatgataaaacgcagagtgctcagaacaagggcaataaaaatgttggttctggacgag
tcggatgaaatgcttaacaaaggtttcaaagaacaaatttatgatgtatatcgctaccta
ccccctgcgactcaggtagtgctcgtttcggcaactctacctcatgaaattcttgaaatg
accagcaaattcatgactgaccccatacgtattctcgtcaaacgtgatgaattgacgctt
gaaggtatcaagcagttttttgtggcagttgaacgtgaagaatggaaatttgacacgctg
tgcgatctctacgatactcttaccataacacaggcagtaatattctgcaatactaaacgc
aaagtagactggctcactgagaaaatgcgggaggcaaacttcacagtgtgttccatgcac
ggtgatatgccacaaaaagagagagataacattatgaaggagttcagatcgggtcagagt
cgagttttaatcacgacagacgtatgggctagaggaatcgatgtacaacaagtttctctg
gtaataaattatgatctgcccaataatcgagagttgtatattcaccgcatcggacgttcc
ggtcgttttgggcgaaagggagtctcgataaattttgtaaaaactgacgacattagaatt
cttcgtgacattgaacaatactattctacgcaaatcgatgagatgccaatgaatgttgca
gatttaatttaa
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integrated database retrieval system
