Athalia rosae (coleseed sawfly): 105685538
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Entry
105685538 CDS
T09776
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
aroa
Athalia rosae (coleseed sawfly)
Pathway
aroa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105685538
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aroa03041
]
105685538
Spliceosome [BR:
aroa03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
105685538
Complex C
U5 SnRNP specific factors
105685538
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
105685538
NCBI-ProteinID:
XP_012255140
LinkDB
All DBs
Position
3:163083..174352
Genome browser
AA seq
2374 aa
AA seq
DB search
MSIPPYLLGPNPWATMMAQQQAHAQLAAAQAHAQAAAHAQAAHHAHMHAMAGPPLPQLPK
QPDVISEDKLQEKAQKWQQLQSKRFAEKRKFGFVDAQKEDMPPEHIRKIIRDHGDMSSRK
YRHDKRVYLGALKYMPHAVMKLLENMPMPWEQIRDVKVLYHITGAITFVNEIPWVIEPVY
IAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNVLDVEPLEAIQIELDSEED
ESVASWFYEHKPLVGTKHVNGSTYRKWNLSLPQMATLYRLANQLLTDLVDQNFFYLFDPK
SFFTAKALNMAIPGGPKFEPLVKDSNAADEDWNEFNDINKIIIRQPIRTEYRIAFPYLYN
NMPHFVHLSWYHAPNVVYIKTEDPDLPAFYFDPLINPISHRNSLKTMEPQIDEDEDFVLP
EEVQPFLQETPLYTDNTANGIALLWAPRPFNTRSGRTRRAIDIPLVKSWYREHCPPGQPV
KVRVSYQKLLKYFVLNALKHRPPKPQKKRYLFRSFKSTKFFQTTTIDWVEAGLQVCRQGY
NMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLIIDSH
VQYRLNNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMRQIRMCKDLKHLIYYRFNTGPV
GKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHF
DLELRASVMHDIVDMMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPIPIENMILR
YVKMKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLTRLYLKAEQERQHNYLKDGPYI
SPEEAVAIYTTTVHWLESRRFAPIPFPPLSYKHDTKLLILALERLKEAYSVKSRLNQSQR
EELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMDLYSHLIPVYDVEPLEKITDAY
LDQYLWYEADKRRLFPPWVKPSDTEPPPLLVYKWCQGINNLQDVWDVSEGECNVLLESKF
EKLYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYKDMNHTNSYGIIRGLQFASFIA
QYYGLVLDLLVLGLQRASEMAGPPQMPNDFLTFQDVASETAHPIRLFCRYVDRIHLFLRF
TAEEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRL
PRSTTTIQWENSFVSVYSKDNPNLLFNMSGFECRILPKCRTTHEEFTHRDGVWNLQNEIT
KERTAQCFLRVDDESLQRFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFREAVVNT
QELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLR
WSKQTDVGITHFRSGMSHDEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEANAQNR
RLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRIRTEFKQYQVLKQNPFWWTHQRHD
GKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNA
QRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHL
WQKVHESIVMDLCQVFDQELDALEIETVQKETIHPRKSYKMNSSCADILLFSAYKWNVSR
PSLLADSKDMMDNTTTQKYWIDVQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTGL
LIAIDLAYNLHSAYGNWFPGCKPLIQQAMAKIMKANPALYVLRERIRKALQLYSSEPTEP
YLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKI
IHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPN
IVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILR
ALHVNTERTKVVLKPDKTTITEPHHIWPSLTDDEWIKVEVQLKDLILADYGKKNNVNVAS
LTQSEIRDIILGMEISAPSAQRQQIAEIEKQTKEQSQLTATTTRTVNKHGDEIITATTSN
YETQTFSSKTEWRVRAISATNLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFVTISDLR
AQIAGYLYGISPPDNPQVKEIRCIVMAPQWGTHQTVHLPSSLPNHQYLKEMEPLGWIHTQ
PNELPQLSPQDISTHARVMAENSGWDGEKTIVITCSFTPGSCSLTAYKLTPSGFEWGKQN
TDKGNNPKGYLPSHYEKVQMLLSDRFLGFFMVPSQGSWNYNFMGVRHDPNMKYELQLANP
KEFYHEVHRPAHFLNFSSLEDGDGVGADREDMYS
NT seq
7125 nt
NT seq
+upstream
nt +downstream
nt
atgtccattcccccttacctattggggcctaacccatgggctactatgatggcccagcag
caggctcacgctcagcttgcagctgcccaagcccacgcacaggcagcagctcatgctcag
gcggcacatcatgcccacatgcacgccatggctggacctccattgcctcagcttccgaaa
cagccagatgtgatttctgaagacaaattgcaagaaaaagcccaaaaatggcagcaattg
cagtcgaaacgttttgcggaaaaacgtaagtttgggttcgtcgatgcacaaaaagaagat
atgcccccagaacatatcagaaaaatcatcagagaccacggagacatgagcagcaggaag
tatagacatgacaagcgtgtatatttgggagccctgaaatacatgccacatgctgtaatg
aagttattggagaatatgcccatgccatgggagcaaattcgagatgttaaagtgctgtat
catatcacaggagccataacctttgtcaatgaaatcccatgggttattgaaccagtctat
attgctcaatggggtaccatgtggatcatgatgagacgcgaaaaaagagatcgtaggcat
tttaagagaatgcgattcccaccattcgatgacgaagagcctcctctggattatgccgac
aatgtactggacgtggagcccttagaagctatacaaatagagctagattcggaggaagac
gaatctgttgcatcttggttttacgaacacaaacctttggttgggacgaaacacgtcaac
gggtctacatatcgcaaatggaatttatccctcccacaaatggccacgttgtatcgactg
gcaaatcaattattgaccgatttggtcgatcaaaacttcttctacctctttgacccaaag
tcattttttaccgcgaaagcattgaatatggctatacctgggggtccgaagtttgaacca
ctagtcaaggattccaacgcagccgacgaggactggaacgagtttaatgatataaacaaa
ataatcatcaggcaaccaattcgtacagaataccggattgcgtttccgtatttatacaac
aacatgccacacttcgtgcatctctcatggtaccacgctcccaatgtagtgtatattaag
actgaggatcctgatttacctgccttttactttgatcctctgatcaacccgatctcacat
cgtaattctctgaagacaatggaacctcaaatcgacgaagatgaagattttgtgcttccc
gaagaagttcagccttttctgcaggaaactcctctgtataccgacaacacggcaaatggc
atcgcactattgtgggctccacgccctttcaacactcgctctggtagaactcgacgagct
atagacattccactagtgaaatcttggtaccgcgaacattgtccgcctggtcagccggtg
aaagttcgcgtcagctatcaaaaacttctcaagtattttgtactgaatgccttgaaacac
aggccacccaagccacagaaaaaacgctacttattcaggtcttttaaatcgacaaagttt
tttcaaactacaactatcgactgggtggaagctggccttcaagtttgcagacaaggatat
aacatgctgaacctactgattcatagaaagaatctgaattacttgcaccttgattacaat
ttcaatttgaaaccagtcaaaactctgaccaccaaagagagaaagaagtcccgttttggt
aatgcattccatctgtgtcgggaaattcttcggttgacgaaattaatcatcgattcccac
gttcaataccgattgaacaacgtagatgctttccaactcgccgacgggttgcaatatatt
tttgctcacgtcggacagctcaccgggatgtatcgatataagtacaaactcatgagacag
ataagaatgtgcaaagacttgaaacatctcatctactacagattcaataccggtccggta
gggaaaggaccaggatgtgggttctgggctcctggttggcgagtgtggttgtttttcatg
cgtggaattacaccattgttggaacgatggcttgggaatctattgtcgaggcaattcgaa
ggtcgacactccaaaggggtggcaaaaactgtcactaaacaacgagtcgagtctcacttt
gatcttgagttgagagcctcggtgatgcacgatatagttgatatgatgccggaaggtatc
aaacaaaacaaagcaaggactattctacagcatctcagcgaagcctggagatgctggaaa
gccaacattccgtggaaggtaccagggctcccgataccaattgagaatatgatacttcgc
tatgtcaaaatgaaagctgactggtggactaacactgcgcattacaatcgcgagcgtatc
cggcgtggcgcaactgttgacaaaacggtgtgtaaaaagaatttgggacgcttgactcga
ctttatctcaaggcggaacaggagcggcaacataattatttgaaagacggaccttatatt
tcaccggaggaagctgtcgcgatttacactacgacggttcattggttggagtctcgcaga
tttgcaccaataccatttccacctctgtcgtacaaacacgatacaaaactattgattttg
gctctagaacgattgaaggaagcttacagcgtgaaatcgagattaaatcaaagccagcga
gaagaactgggtctgattgaacaagcgtatgacaatcctcacgaggcattatccaggatc
aaacgtcatctcctaacccaaagagccttcaaggaggtgggaatcgagtttatggatctg
tacagccatcttattcctgtgtacgacgtagagcccttagagaagattacggatgcgtat
ttggatcagtacttatggtacgaggcggacaaacgtaggctctttccgccatgggtaaaa
ccctcagataccgaacctccgccgcttttggtttataagtggtgtcagggtatcaataat
ctacaagatgtctgggatgtcagcgaaggcgagtgcaacgtcctacttgagtcaaagttt
gaaaagctctacgaaaaaattgatctgacattgctcaacagactcctcaggctcatcgtt
gatcacaatattgctgattacatgacggccaaaaacaacgttgtcataaattacaaggat
atgaaccacaccaacagttatggtataatcagaggtctacagttcgcttcttttatagcc
caatattacgggttggtattggacttgctggtgctgggattgcaaagagcaagcgagatg
gccgggcctccgcagatgccaaatgatttcctaacattccaagatgtagcatccgagact
gctcatcctattcgtttgttctgcagatacgtagacaggattcatttgttcctcagattc
accgctgaagaggctagagatctaattcaacgatacctgaccgaacatcccgatccgaat
aatgaaaacattgttggctacaacaataaaaaatgctggccacgtgatgctcgtatgcgt
ttgatgaaacacgacgtaaaccttggtcgagctgtattttgggacatcaagaatcggcta
cctcgctcgacaacgacgatccagtgggagaatagtttcgtcagcgtgtacagcaaggat
aatcctaatttattattcaatatgagtggcttcgagtgtcgtattttgcccaaatgcaga
acaacgcacgaagaattcacacatagagacggtgtgtggaatttgcaaaatgagattaca
aaggaaagaacagcgcaatgtttcttgagagtagatgacgaaagtctgcagagattccac
aacagagtgagacaaattctcatggcatctggttcaactacattcacgaagattgtcaac
aagtggaatacagcactcattggattgatgacttacttccgggaagcagttgtcaatact
caggaactcctggacctcttggtcaaatgcgaaaacaaaattcagactagaatcaagatt
gggttgaattccaaaatgccttcccgattccctccggtcgtcttctatactcccaaagaa
ctgggaggacttggcatgttatccatgggccacgtacttatcccgcagtccgatctgcga
tggtcaaaacagaccgatgttgggattacgcattttcgctctggtatgagtcacgacgag
gatcaattgattcccaacttataccgatacattcaaccgtgggaatccgaattcatagat
tctcaacgtgtctgggccgagtatgcgttgaagcggcaagaggctaatgcacagaatcgt
cgactgactcttgaggatctcgaagatagctgggatcgcggtatccccagaataaacacc
ctcttccaaaaagacagacacactctagcctatgacaaaggatggagaatacgaactgaa
ttcaagcaatatcaggtactgaaacaaaatccgttctggtggacccaccaacgtcacgat
ggtaaattatggaatttgaataactacagaactgacatgatccaagctctgggtggtgta
gaagggattctcgagcacacgctcttcaagggaacgtatttccccacctgggagggtttg
ttttgggagaaagcatctggatttgaagagtcgatgaagtacaaaaaattgaccaatgca
cagagatctgggttgaatcaaatcccgaatcgtcgcttcaccctttggtggtccccaact
atcaaccgagctaacgtgtatgtcggatttcaggtgcaactggatctgacgggaatcttc
atgcacggtaaaatccctactttgaaaatttccctgatccaaatattccgagctcacttg
tggcaaaaagtgcacgaatcgattgtgatggacttgtgccaggtattcgatcaggaactg
gatgcactggaaatcgaaaccgtgcagaaggaaactattcatcccagaaagtcatacaag
atgaattcttcttgcgcggatatattgctcttctcggcgtacaaatggaatgtctccaga
ccatctttattagccgattcaaaagatatgatggataatactacaactcagaaatactgg
atcgacgttcagttgagatggggtgattacgattctcatgatatcgagagatacgcccga
gccaagttcttggattacacaacggataacatgtcgatttacccttcgccaactggtttg
ttaatcgcgatcgatttggcttataacttgcacagtgcctatggcaattggtttccgggg
tgtaaaccgttgatacaacaggcaatggcaaagataatgaaagctaatcctgctctgtac
gtgttgagagaacggattagaaaggctcttcaactttactcatccgaacccacggagcct
tacctgtcctcccagaactatggcgaacttttctctaatcagattatttggttcgtcgac
gacacaaacgtgtatcgagtgaccatacacaaaacattcgagggtaacttgactacgaaa
cctataaacggtgcgatatttatcttcaatcctcgaaccggacagcttttcctcaaaatc
attcatacttcggtttgggctggtcaaaaacgtttgggacagcttgccaaatggaagacc
gccgaagaggttgcagctctgattcggtctctgcctgtcgaagaacaaccgaagcaaatc
atagtaacgagaaagggtatgctggatccgctcgaggttcatttactcgatttccctaac
attgtgatcaagggatcggagctgcagcttccgttccaagcctgtcttaaagttgaaaag
tttggtgatcttattttgaaagccacagaaccgcaaatggtccttttcaatctttacgat
gattggttaaaaaccatttcatcgtacacggcattttcacgtctgattctcatcctgaga
gcattgcatgtaaataccgagagaacaaaggttgttctgaagcccgataaaacgacaata
accgaaccgcaccatatttggccttctcttaccgatgacgagtggatcaaagtggaggta
cagctcaaagatttgatcttggccgactacggcaaaaagaacaacgttaacgttgcgtcg
ctcacgcaatctgaaatccgtgatattatccttggtatggagattagtgcaccgtccgcg
cagagacaacaaatagcggagatcgagaaacagaccaaagagcaatctcaactcacagca
acaaccacgagaaccgtgaacaagcacggtgacgaaatcattactgctactacgtcgaat
tacgaaactcaaacattcagttctaaaaccgaatggcgagtcagagctatatccgccacc
aatcttcacttacgaacgaaccacatctatgtttcatccgacgacatcaaggaaaccggc
tacacctacatcttgccaaagaatgtgctcaagaaatttgtcaccatctccgatttacgg
gctcagatcgcggggtatttgtacggtatcagtccaccagacaatccccaggtcaaagaa
atcaggtgtatagtaatggctcctcagtggggaactcatcaaaccgtgcacctaccgagt
tcattaccaaatcatcaatacctcaaggaaatggaacccctgggatggatacacacccag
ccaaacgaactaccgcagttgtctccacaagacatttcgacccatgcaagggtaatggca
gagaattccgggtgggacggagaaaaaaccatcgtcattacttgcagtttcacacctgga
tcctgctcccttaccgcgtataagctcacgcctagtggtttcgaatggggcaaacaaaat
accgacaagggaaataaccccaagggatatctccccagtcattatgaaaaagtacaaatg
ctgttatccgaccgcttcctgggtttctttatggtgcctagccaaggctcttggaactac
aacttcatgggtgtgaggcatgacccaaatatgaaatacgagttgcagctggctaacccc
aaagaattctatcacgaggttcaccggcctgcccatttcctcaatttctcaagtctagaa
gatggcgacggagtaggtgcggacagagaagatatgtattcgtaa
DBGET
integrated database retrieval system
