Athalia rosae (coleseed sawfly): 105685578
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Entry
105685578 CDS
T09776
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
aroa
Athalia rosae (coleseed sawfly)
Pathway
aroa04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
105685578
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
aroa01009
]
105685578
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aroa04131
]
105685578
03029 Mitochondrial biogenesis [BR:
aroa03029
]
105685578
Protein phosphatases and associated proteins [BR:
aroa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
105685578
Membrane trafficking [BR:
aroa04131
]
Autophagy
Autophagosome formation proteins
ULK complex
105685578
Mitochondrial biogenesis [BR:
aroa03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
105685578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG17_like
ATG11
TBK1_ULD
ubiquitin
Motif
Other DBs
NCBI-GeneID:
105685578
NCBI-ProteinID:
XP_012255238
LinkDB
All DBs
Position
3:1773032..1783845
Genome browser
AA seq
1367 aa
AA seq
DB search
MLYIFHVDTGTTITFDMKLALESVSQLREAIERECGVAASQQVLLVSGGESLEPNARVCT
YSAGTDTNPIYLFSKASIESHQPPTPSIDYGSDVDLQTQIEGSLAMPATYQTVVNRAQLG
HQCCVLAREQTRICERLVHDQHLQQQGWAAVVANLEDITQMFQSRADILQQSFNHYLAER
QQHINLLNNFNEDLGMLSKIPILPALRAHAEGLLSPDDQETVTDLQRSGNEEALSLLKWI
SAKDNQSSLEQVAEQCSRGLEQFDERVMESLKAEVNSAVEAANKQDMKEIKGLGERLFGL
EQLMFEAKKLVQEQADLAQALLQNQNRATNLGDASILPDLCASHRRQLLVMLQNHNHLRD
IRRRCTKAKEELSVNLYHRLKWIMYVENKMMEVDGKLVMYNESLKRLRRHLEVLQQIHLA
PEMYMSAVAEVVRRRTFSQAFLLWASNLACQLLTVHSEELARRTDFQSKFDGHFLNTLFP
GLEDTPPSFATQAPSIFDSALPKLTSDDMQSLRETLPDLALAVSTPDLNSITQFFLSKSL
TEGSTTEGFKDKEVGQQSEDPSTKMSGQRRAPLLSDRGGFESETDTEEFEKIGQGAQDLK
QGSSYDGERERESQKELSEENLGNTREEVERLRSVLRCMKSVAGDALLAFRQELASLKEQ
TVNDQGSFNQLTDNVRKALEMHSRECEKTFRERAQELTVDHELELGDLKKLMQGRDEEIK
ALKESLADKLDAQSDVEEVLAALRLKIDNDQRELATFRSKIILMDEALQRAHLEKEIAVK
ETQEAGIAEVSNLKAVIKEQEEQLRKLEESLIVCKGEQEEAIKAATDKFQKEYKTELDNI
RSRFKLMAASTMERSPSDLSLEKIERPDMIGLGNHETIIAQMKEDMETEKAAAIRVAIEK
ERSDCAAKLDHELRLARQRNDAERQVWFNEAMRRVIEEKERQVETHRSRETILAEECERL
KDTIRRLTESESNIRQTLSETVESLEADKVRLEANIEANRTMLSERESRLETLIAERDKL
RSELNDERLKINSSGGEFEETLHLLKAKNERLENLKVGTDSRLQKLEAEKDKLKAELEIH
RKNDEIEVSESKKVRLESGPELDDLLRRLEARDVENKRLITELRLLTESKDLVQTKLETV
ESEKVNLEVELVKERYRSVVSGAEALIASTSAGPSGAEGCDKEMCASVAIVSDSSSCDVA
TSPEPIRHQPSAHLREKLTRSTASLIQQDRISISSCNPGDVVLVLWDSEHRNYIILQESP
MLYFLHSDCVNTLDLRVEPDGSRRLYVIAEVIRKEYCHAKKPQNRYKVPQGTKFYQVKVR
PQQKEEHLSKPVSSSVQETAGTTASTDLIAKKKQEQEREQEQEQTTH
NT seq
4104 nt
NT seq
+upstream
nt +downstream
nt
atgttgtatatatttcacgtcgacactgggactaccatcacctttgacatgaagttggcg
ctcgagagtgtctcgcagttgagagaagctatagaaagagaatgcggcgtagcagccagt
cagcaggtgctgttggtgagcggcggagaaagtcttgagcccaacgcaagggtctgcaca
tattctgctgggacggatacaaacccaatttatttattcagcaaagcttcaatcgagagt
caccaaccacccacacccagcatagactacggctcagatgtggatctccaaacgcagatc
gaaggttctttggctatgcctgcgacttatcaaactgtcgtaaatagagcacaactcggt
catcaatgctgcgttttggcacgtgaacaaacaagaatatgtgaaagactcgtgcacgac
caacatcttcaacaacagggttgggctgctgtcgtagccaacctagaagatattactcaa
atgtttcaatccagagcggacattctccagcaaagtttcaaccactatttagcggaaagg
cagcagcacattaatctcctcaacaattttaacgaggatttgggaatgctgtcgaaaatt
cccatccttcctgctctcagggctcacgcagaaggacttttaagtcctgacgatcaagag
acagtcacggatcttcagcgttctggtaacgaagaagcgttgagtctgctgaagtggata
tcggcaaaggacaatcaaagtagcctcgaacaagttgctgagcagtgttcgaggggcttg
gaacagtttgacgaacgagtgatggaatcgctcaaggcagaagtaaatagtgctgtcgaa
gcggcgaataaacaggatatgaaagagataaagggtctgggtgagcgacttttcggtctc
gaacagctgatgttcgaggctaaaaagttggtgcaggaacaggctgatttagcgcaggcc
cttctacaaaatcagaatagagcgaccaaccttggagatgcaagcatattgcctgattta
tgcgcgtcgcataggaggcagctgttggttatgctccagaatcataatcacctccgtgat
ataagaagaagatgtacaaaggctaaggaagagctctcagttaatctttaccaccgttta
aagtggattatgtacgtcgagaataagatgatggaggtcgatggaaagctagtcatgtat
aacgaaagccttaaaaggctcagacgacacctggaagttttacaacaaattcatttggct
cctgaaatgtatatgagtgccgttgcggaggtcgtgagacgcaggactttttcgcaagct
ttcttgctttgggcaagcaacctcgcctgtcaacttctcaccgtacatagcgaagaactt
gctcggagaactgacttccagagcaaattcgacggacactttctcaacactcttttccct
ggactggaagatacccctccctcatttgctactcaagctccgtccatattcgacagcgct
ttacccaagctaacttcggacgacatgcaatctctcagagaaacactccccgatcttgcc
ctggctgtttctacgccggatttaaacagcatcacacaattttttctatctaaaagtctg
acggagggcagcactacggaaggtttcaaggataaagaggttggccagcagtcggaggat
cctagtaccaaaatgtctggacaaagaagagccccgttgctgagtgacaggggaggtttt
gagtctgaaacagacacggaagagtttgaaaaaataggtcaaggtgcacaggacctgaaa
caagggagttcttacgacggtgagagggaacgagaatcacagaaggaattatcagaggaa
aatcttggaaacacgcgagaagaggtagagagacttcgttcggttctccgttgtatgaaa
tcagtcgctggagatgcgcttctagctttccggcaagaattggcgtcgttaaaagaacag
accgtgaatgaccagggctcgttcaatcaactgacggacaacgtgagaaaggcactcgaa
atgcattccagagaatgtgaaaaaacgttccgcgaaagagcacaagagttgaccgtagat
cacgaacttgaactgggtgatctgaagaagctcatgcagggacgggatgaggaaataaag
gctcttaaagaatcactcgccgacaaacttgacgctcaatcagacgttgaggaagttctc
gctgctttgaggcttaaaatcgacaacgatcagagagaattggcaacctttcgatcgaaa
attattctgatggacgaggctctccagagagctcacctcgagaaggaaatcgctgtgaag
gaaactcaggaagctggtattgcagaggtttcaaatttgaaggccgttatcaaagaacag
gaagagcagctcaggaaactggaggaaagtctgatcgtttgcaaaggtgaacaagaggag
gccatcaaagcggcgactgacaaatttcagaaagagtataaaaccgaattggataacata
aggagcaggttcaaactcatggcagcttctacaatggaaagaagccccagcgatttgagt
cttgagaaaattgagcgtccagacatgataggactcggaaatcacgagaccatcatcgcg
cagatgaaggaggatatggaaactgagaaggcggccgcaattcgtgttgccatagagaag
gagaggagcgattgcgcggcgaaattggatcacgaactgcgactcgcccggcagagaaat
gacgccgagagacaagtctggttcaacgaggctatgcgccgagtgatcgaagaaaaggag
aggcaggtagaaactcacagatccagggaaaccatcctggcggaggaatgcgagcggctg
aaggacaccataaggagacttacggagtcggagagcaacattcgacagaccctcagtgag
acggttgaaagtctcgaggcggacaaagtgcgactagaggccaacatcgaggcaaatcga
accatgctcagcgaacgcgagagtcgtttagaaaccttgatcgcggagcgcgacaagctc
aggtcggaattgaacgacgaaagactgaagataaacagtagcggtggagagttcgaggaa
acgctgcaccttttgaaggcaaagaacgagaggcttgaaaatcttaaagtagggacggac
tcgcgactgcagaaactcgaggcagaaaaagacaagctcaaagcggagcttgaaattcac
cggaaaaacgacgaaatcgaagtttccgagtccaaaaaagtgcgcctggaatctggaccg
gaactcgatgacctacttcgcagactggaagcacgtgatgtggagaataagcgtttaatc
accgaactccgacttttgacagagagcaaggaccttgttcaaacaaaacttgaaaccgta
gaatccgaaaaggtcaacctggaggtcgagcttgtaaaagaaaggtacagatctgtagtc
agcggcgcggaagctctcatcgcttccacctctgcaggaccctccggtgccgaaggttgt
gacaaagaaatgtgtgcctctgttgccatagtgtccgatagttctagttgtgacgttgcg
actagtccagaacccattcgccatcaaccctccgcccacttgagagaaaagttgactcga
agtacagcaagtctaattcaacaagatagaataagcatatcgagctgtaatcctggagac
gtcgtattagtcctgtgggatagcgagcacaggaattatatcatcctgcaggaatctccc
atgctttattttcttcattctgattgcgtcaacacgttagatttgagagttgagcccgat
ggttccaggaggttgtacgtcatcgcagaagtcatccgcaaggagtattgccacgctaaa
aaaccacagaatcgatacaaggtaccgcaaggcactaaattttatcaagtaaaggtgcgt
cctcagcaaaaagaggaacatttgagtaaaccggtgagttccagtgttcaggaaacagcg
ggcactactgcttcgactgatttgatagcgaaaaaaaagcaagaacaagaacgggaacag
gaacaggaacaaactacacactga
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integrated database retrieval system
