Athalia rosae (coleseed sawfly): 105685751
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Entry
105685751 CDS
T09776
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
aroa
Athalia rosae (coleseed sawfly)
Pathway
aroa03440
Homologous recombination
aroa03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105685751
03450 Non-homologous end-joining
105685751
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aroa03032
]
105685751
03400 DNA repair and recombination proteins [BR:
aroa03400
]
105685751
DNA replication proteins [BR:
aroa03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
105685751
DNA repair and recombination proteins [BR:
aroa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
105685751
BRCA1-C complex
105685751
NHEJ (non-homologous end-joining)
MRX complex
105685751
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_21
Rad50_zn_hook
SbcC_Walker_B
SMC_N
AAA_29
AAA_16
ABC_tran
Motif
Other DBs
NCBI-GeneID:
105685751
NCBI-ProteinID:
XP_012255537
LinkDB
All DBs
Position
2:28617068..28623965
Genome browser
AA seq
1366 aa
AA seq
DB search
MSRIRRLGIRGIRNFGPGDEKQLQTIVFSHPLTLILGPNGTGKTTIIECLKYATTGEFPP
GSTGGGRANSFIHDPLLTNESSVRALVKAEIVDIRGEQVTVSRRLECTQQKYGKKFQTLD
SALSRIDPATGEKIAISHRCADIDSEMELALGVSKPILNYVIFCHQEESTWPLEDGKKLK
ERFDQIFDSEKYNKALEKARQISKKLQIEIRVSKTQEKSLKILLEEATEKKKNLAKNERR
LANSVARITEISSKIQPIAEELSQLRNTEVSYMKLHTEKETKKTEFVLLKQQIADLKKNI
QTLHKGTLEELEKEILAYDSILTEMEAELSTLKVNLKQIDKEENNLKQVIGKQQLSIGEL
KQQTQALQTNIITRNQNLEEMLTKWGMDGVGPEITETEASTCLDRLKEKLHDMEAGIKDT
VLEQQNIEQQLQKDLDELRDKKSKLESGMNLLKKQIAEKRKECGKMHALIDEVNVLASKL
DIINSKLQEANKNVDCLAGSLDVNIVKKNILDAIKNRDEMEMNLDKINKEVTLLQQQSSL
NGELDLLKSNLSAKEKDVQKLKNKHEDNLKMLLNVKVLPDTDLKRALNRVQDSLTDRIRE
LNEAMQKQQRQLSSLETTKKFKERELQEKNNELENMQDEIETMCHGKEYNEVLLLAKKTV
QDLQDSKGLYAYKSIAYKDYIQKTDSCCPLCHRNFENQQDIEDFKSELTDEINKYPNQLK
TCEEQLIIQQKRYDSLVQLQPLVKKVVEMENVTLKTLREDLSNIKQKLSESHTQIEKLRL
ELAEPENKQAQCKDIIGDIALWDQYSAEVTKLVQAIAHVKSRLPERTDDKSMQEVQGEQE
SVRKELSTVRKQIESLQLSLNNYNEKLQNARETRNKLAEEQLRITSEVQNLKQLQDKLKD
LSAEETALQESVQESQIELGPVSQQLLAKDHLLQKTKKEHQQFLEKERAIFAEKSRSLHD
LNAVQLAIEKSIRRGVVEALKRAEAVITKYQKQADELDWEKSEISSKMHDIVNNISKQET
LKRDMKDNVVLKQKTMAARELEHQVSELREKLGDMNYRQLMEQKTKLTEEQEDLFREKNI
ERGGQDEIALNIKKLKNELDKEIFRMAHKNYVNKCAEVLVQEQTVKDITLYITALDQAII
EYHEERMATVNKIILNLWELIYKGKDTTSIQIHTERTEGQSEKKRVYNYKVVQEKQKVTM
DMKGHCSAGQKVLASIIIRMALAETFAKNCGIFALDEPTTNLDVSNMDSLAKALATIVNI
RSKHQKNFQLIVISHDESFVKQLTRVNRIKRVHELYRNEIGLTQIKTWCVDVTASDAPVD
PDSSEEEEAKDTEAEIRSRKRRRLAEERKQLALTASRKKKIARMDI
NT seq
4101 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagaatacggaggttgggaattcgaggaattcgcaattttggtccaggcgatgag
aaacaattacaaaccatagtattcagtcatccgctaactctgatactgggcccaaatgga
accgggaaaacaactatcattgaatgcctgaaatatgcaacaactggagaattccctcca
ggaagtactggaggtggaagagctaattcgttcattcacgatccgctgctcaccaacgaa
agctctgtaagggctctagtaaaagctgaaatagttgacatcagaggagagcaagtgaca
gtatcgcgtagactggagtgtactcagcagaagtatggtaaaaaattccaaacactagac
agtgcactgtcacggatcgatccagcaactggagagaaaatcgcaatcagtcatcgctgt
gcagacatagactctgaaatggaactagccttaggagtgtcaaagccgattttgaattac
gtcattttttgtcatcaagaggaatctacttggcctttggaggatggaaaaaaactgaaa
gaacgatttgatcagatatttgattctgaaaaatataacaaagcgttggaaaaagccagg
caaattagtaaaaaattacaaattgaaattcgcgtatcaaaaactcaggaaaaaagcttg
aaaatccttcttgaagaggctactgaaaaaaagaaaaatttagctaaaaatgaaaggcga
ctagctaattctgttgctagaattacagagatttcatcaaagatacaacccattgctgaa
gaactatctcaattaagaaatactgaggtatcttacatgaaattgcatactgaaaaagaa
actaaaaaaactgagtttgtactattgaaacagcagattgctgatttgaaaaaaaacatt
caaactcttcacaaaggtacactggaagaattggaaaaggaaatactggcatatgattca
atactgactgagatggaagctgaattgtccactttgaaagtgaatttaaaacaaattgat
aaagaagagaacaacttgaagcaggttattggtaaacaacaattatcaattggcgaatta
aagcagcaaactcaagctttacaaacaaacattatcacccgaaaccaaaatcttgaggaa
atgctaacgaaatggggtatggatggagttggtcctgaaataactgaaacagaggcatca
acctgtttggatcgattgaaagaaaaacttcatgatatggaagcgggtattaaagataca
gttctagagcaacaaaatatcgaacaacaattacaaaaagacttggatgagctgagagat
aaaaagtctaaacttgaatcaggaatgaatttgctcaaaaaacagattgccgaaaaacgg
aaagagtgtggtaaaatgcacgccctaatagatgaggtgaacgtattagcgagtaaactg
gacatcattaattccaaattacaagaagcaaataaaaacgtcgactgcctggctggaagc
ctcgacgtcaatattgtgaaaaaaaatatactggatgctataaaaaaccgtgatgaaatg
gaaatgaacttggataaaatcaacaaggaagtaacgttgcttcagcaacaaagctcatta
aatggcgaactcgatctgctcaagtctaatttgtctgcaaaagaaaaggacgtacagaaa
ctgaagaacaagcatgaagataacttgaagatgctattgaatgtcaaagtcttgccagat
accgatcttaaacgtgcactcaatcgtgtccaggacagcttgactgatcgcataagagaa
ttgaatgaagctatgcaaaaacaacaacgtcagttatctagcttagaaacgacgaaaaag
ttcaaagaacgtgaattacaggaaaaaaataacgaattagaaaatatgcaagatgaaata
gaaacaatgtgccatggtaaagaatataacgaagttttgctacttgctaaaaaaactgta
caagatttacaagactccaaaggattgtatgcttataagagtatagcgtacaaagattat
atacaaaaaactgattcgtgctgtccattgtgtcatcggaattttgaaaatcaacaagat
attgaagatttcaaatcagagttaactgatgaaataaataaatatcccaatcagttgaaa
acgtgtgaagaacaattgataattcagcaaaaacggtacgactctttggtacagctgcaa
ccccttgtaaaaaaagtcgttgagatggaaaatgtcacgttgaagaccctgagggaagat
ctcagtaacatcaagcagaagttatctgaatcacatacgcagattgagaaattgagatta
gaactagctgaaccggaaaataaacaagcgcagtgcaaagatattattggcgacatagcc
ttgtgggatcaatattcagcagaggtaacaaaattagttcaagcgatagctcatgttaag
agccgtctgcccgaacgaacggacgataaatcgatgcaagaagttcaaggtgaacaagaa
tctgtgcgaaaagaactcagtacagttcgcaagcaaattgagagccttcaattgtcacta
aataattacaatgaaaaattgcaaaacgcgagagaaactagaaataaacttgccgaggag
caattaaggattacatcagaggttcagaaccttaaacaactacaggacaagctgaaagac
ttatctgcggaagaaacggctcttcaagaaagcgttcaggagtcgcaaatcgaattggga
cctgttagtcagcaactcttagctaaggatcatctcttacaaaaaacgaagaaagaacat
cagcagttcttggaaaaagaaagagctattttcgctgaaaaatctagaagtctgcatgat
ttgaatgctgttcagttggcaattgaaaaaagcattcgtcgtggggtagtggaagcattg
aaaagggctgaggctgttataacaaagtaccagaagcaggcagatgaattggattgggag
aagagtgaaatatcttctaaaatgcatgatatagtaaacaatatttccaagcaagagacc
ttaaaacgggacatgaaagataacgtggtgctgaaacaaaagacaatggcagctagagaa
cttgaacatcaagtttctgagctccgagagaaattaggtgacatgaattatcgccagtta
atggaacaaaaaacaaaattgaccgaggaacaagaagatctattcagagaaaaaaacatt
gaacgaggaggtcaggatgaaatagcactcaacattaagaaattgaagaacgagctcgat
aaagaaatctttaggatggcacacaaaaattacgtaaataaatgtgctgaagttttggtg
caagagcaaactgtgaaagatataacattgtacatcacagctctagatcaggcaataatt
gagtatcacgaagagcgaatggctacggtaaacaaaatcatacttaatctttgggagcta
atctataagggcaaagacacaacatccattcagattcacactgaacgcactgaaggacaa
tctgagaagaaaagggtttataattacaaagttgtgcaagagaaacagaaagttaccatg
gacatgaaaggacattgcagcgctggtcagaaggtactggcttcaattattattagaatg
gctcttgctgaaacatttgccaaaaattgcggtatatttgcgttggatgagccaacaaca
aaccttgatgtcagtaacatggatagtttagctaaagcacttgctacgattgttaatatt
cgttcaaagcatcagaaaaatttccaattaatcgttatcagccacgacgaatcttttgtg
aagcaattgaccagagtgaacagaatcaagagggtgcacgagctctatcgtaatgaaatt
ggactaacgcagattaagacgtggtgcgttgatgttaccgcaagcgatgccccagttgat
ccagattcctctgaagaagaggaagccaaagataccgaggcagaaatccgttcacgtaaa
cgaagaagacttgcagaagaaagaaaacagctggctcttactgcgtcccgtaaaaagaag
atcgcaagaatggacatctaa
DBGET
integrated database retrieval system