KEGG   Athalia rosae (coleseed sawfly): 105685751
Entry
105685751         CDS       T09776                                 
Name
(RefSeq) DNA repair protein RAD50
  KO
K10866  DNA repair protein RAD50 [EC:3.6.-.-]
Organism
aroa  Athalia rosae (coleseed sawfly)
Pathway
aroa03440  Homologous recombination
aroa03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:aroa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    105685751
   03450 Non-homologous end-joining
    105685751
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:aroa03032]
    105685751
   03400 DNA repair and recombination proteins [BR:aroa03400]
    105685751
DNA replication proteins [BR:aroa03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    105685751
DNA repair and recombination proteins [BR:aroa03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     105685751
    BRCA1-C complex
     105685751
   NHEJ (non-homologous end-joining)
    MRX complex
     105685751
SSDB
Motif
Pfam: AAA_23 AAA_21 Rad50_zn_hook SbcC_Walker_B SMC_N AAA_29 AAA_16 ABC_tran
Other DBs
NCBI-GeneID: 105685751
NCBI-ProteinID: XP_012255537
LinkDB
Position
2:28617068..28623965
AA seq 1366 aa
MSRIRRLGIRGIRNFGPGDEKQLQTIVFSHPLTLILGPNGTGKTTIIECLKYATTGEFPP
GSTGGGRANSFIHDPLLTNESSVRALVKAEIVDIRGEQVTVSRRLECTQQKYGKKFQTLD
SALSRIDPATGEKIAISHRCADIDSEMELALGVSKPILNYVIFCHQEESTWPLEDGKKLK
ERFDQIFDSEKYNKALEKARQISKKLQIEIRVSKTQEKSLKILLEEATEKKKNLAKNERR
LANSVARITEISSKIQPIAEELSQLRNTEVSYMKLHTEKETKKTEFVLLKQQIADLKKNI
QTLHKGTLEELEKEILAYDSILTEMEAELSTLKVNLKQIDKEENNLKQVIGKQQLSIGEL
KQQTQALQTNIITRNQNLEEMLTKWGMDGVGPEITETEASTCLDRLKEKLHDMEAGIKDT
VLEQQNIEQQLQKDLDELRDKKSKLESGMNLLKKQIAEKRKECGKMHALIDEVNVLASKL
DIINSKLQEANKNVDCLAGSLDVNIVKKNILDAIKNRDEMEMNLDKINKEVTLLQQQSSL
NGELDLLKSNLSAKEKDVQKLKNKHEDNLKMLLNVKVLPDTDLKRALNRVQDSLTDRIRE
LNEAMQKQQRQLSSLETTKKFKERELQEKNNELENMQDEIETMCHGKEYNEVLLLAKKTV
QDLQDSKGLYAYKSIAYKDYIQKTDSCCPLCHRNFENQQDIEDFKSELTDEINKYPNQLK
TCEEQLIIQQKRYDSLVQLQPLVKKVVEMENVTLKTLREDLSNIKQKLSESHTQIEKLRL
ELAEPENKQAQCKDIIGDIALWDQYSAEVTKLVQAIAHVKSRLPERTDDKSMQEVQGEQE
SVRKELSTVRKQIESLQLSLNNYNEKLQNARETRNKLAEEQLRITSEVQNLKQLQDKLKD
LSAEETALQESVQESQIELGPVSQQLLAKDHLLQKTKKEHQQFLEKERAIFAEKSRSLHD
LNAVQLAIEKSIRRGVVEALKRAEAVITKYQKQADELDWEKSEISSKMHDIVNNISKQET
LKRDMKDNVVLKQKTMAARELEHQVSELREKLGDMNYRQLMEQKTKLTEEQEDLFREKNI
ERGGQDEIALNIKKLKNELDKEIFRMAHKNYVNKCAEVLVQEQTVKDITLYITALDQAII
EYHEERMATVNKIILNLWELIYKGKDTTSIQIHTERTEGQSEKKRVYNYKVVQEKQKVTM
DMKGHCSAGQKVLASIIIRMALAETFAKNCGIFALDEPTTNLDVSNMDSLAKALATIVNI
RSKHQKNFQLIVISHDESFVKQLTRVNRIKRVHELYRNEIGLTQIKTWCVDVTASDAPVD
PDSSEEEEAKDTEAEIRSRKRRRLAEERKQLALTASRKKKIARMDI
NT seq 4101 nt   +upstreamnt  +downstreamnt
atgtcgagaatacggaggttgggaattcgaggaattcgcaattttggtccaggcgatgag
aaacaattacaaaccatagtattcagtcatccgctaactctgatactgggcccaaatgga
accgggaaaacaactatcattgaatgcctgaaatatgcaacaactggagaattccctcca
ggaagtactggaggtggaagagctaattcgttcattcacgatccgctgctcaccaacgaa
agctctgtaagggctctagtaaaagctgaaatagttgacatcagaggagagcaagtgaca
gtatcgcgtagactggagtgtactcagcagaagtatggtaaaaaattccaaacactagac
agtgcactgtcacggatcgatccagcaactggagagaaaatcgcaatcagtcatcgctgt
gcagacatagactctgaaatggaactagccttaggagtgtcaaagccgattttgaattac
gtcattttttgtcatcaagaggaatctacttggcctttggaggatggaaaaaaactgaaa
gaacgatttgatcagatatttgattctgaaaaatataacaaagcgttggaaaaagccagg
caaattagtaaaaaattacaaattgaaattcgcgtatcaaaaactcaggaaaaaagcttg
aaaatccttcttgaagaggctactgaaaaaaagaaaaatttagctaaaaatgaaaggcga
ctagctaattctgttgctagaattacagagatttcatcaaagatacaacccattgctgaa
gaactatctcaattaagaaatactgaggtatcttacatgaaattgcatactgaaaaagaa
actaaaaaaactgagtttgtactattgaaacagcagattgctgatttgaaaaaaaacatt
caaactcttcacaaaggtacactggaagaattggaaaaggaaatactggcatatgattca
atactgactgagatggaagctgaattgtccactttgaaagtgaatttaaaacaaattgat
aaagaagagaacaacttgaagcaggttattggtaaacaacaattatcaattggcgaatta
aagcagcaaactcaagctttacaaacaaacattatcacccgaaaccaaaatcttgaggaa
atgctaacgaaatggggtatggatggagttggtcctgaaataactgaaacagaggcatca
acctgtttggatcgattgaaagaaaaacttcatgatatggaagcgggtattaaagataca
gttctagagcaacaaaatatcgaacaacaattacaaaaagacttggatgagctgagagat
aaaaagtctaaacttgaatcaggaatgaatttgctcaaaaaacagattgccgaaaaacgg
aaagagtgtggtaaaatgcacgccctaatagatgaggtgaacgtattagcgagtaaactg
gacatcattaattccaaattacaagaagcaaataaaaacgtcgactgcctggctggaagc
ctcgacgtcaatattgtgaaaaaaaatatactggatgctataaaaaaccgtgatgaaatg
gaaatgaacttggataaaatcaacaaggaagtaacgttgcttcagcaacaaagctcatta
aatggcgaactcgatctgctcaagtctaatttgtctgcaaaagaaaaggacgtacagaaa
ctgaagaacaagcatgaagataacttgaagatgctattgaatgtcaaagtcttgccagat
accgatcttaaacgtgcactcaatcgtgtccaggacagcttgactgatcgcataagagaa
ttgaatgaagctatgcaaaaacaacaacgtcagttatctagcttagaaacgacgaaaaag
ttcaaagaacgtgaattacaggaaaaaaataacgaattagaaaatatgcaagatgaaata
gaaacaatgtgccatggtaaagaatataacgaagttttgctacttgctaaaaaaactgta
caagatttacaagactccaaaggattgtatgcttataagagtatagcgtacaaagattat
atacaaaaaactgattcgtgctgtccattgtgtcatcggaattttgaaaatcaacaagat
attgaagatttcaaatcagagttaactgatgaaataaataaatatcccaatcagttgaaa
acgtgtgaagaacaattgataattcagcaaaaacggtacgactctttggtacagctgcaa
ccccttgtaaaaaaagtcgttgagatggaaaatgtcacgttgaagaccctgagggaagat
ctcagtaacatcaagcagaagttatctgaatcacatacgcagattgagaaattgagatta
gaactagctgaaccggaaaataaacaagcgcagtgcaaagatattattggcgacatagcc
ttgtgggatcaatattcagcagaggtaacaaaattagttcaagcgatagctcatgttaag
agccgtctgcccgaacgaacggacgataaatcgatgcaagaagttcaaggtgaacaagaa
tctgtgcgaaaagaactcagtacagttcgcaagcaaattgagagccttcaattgtcacta
aataattacaatgaaaaattgcaaaacgcgagagaaactagaaataaacttgccgaggag
caattaaggattacatcagaggttcagaaccttaaacaactacaggacaagctgaaagac
ttatctgcggaagaaacggctcttcaagaaagcgttcaggagtcgcaaatcgaattggga
cctgttagtcagcaactcttagctaaggatcatctcttacaaaaaacgaagaaagaacat
cagcagttcttggaaaaagaaagagctattttcgctgaaaaatctagaagtctgcatgat
ttgaatgctgttcagttggcaattgaaaaaagcattcgtcgtggggtagtggaagcattg
aaaagggctgaggctgttataacaaagtaccagaagcaggcagatgaattggattgggag
aagagtgaaatatcttctaaaatgcatgatatagtaaacaatatttccaagcaagagacc
ttaaaacgggacatgaaagataacgtggtgctgaaacaaaagacaatggcagctagagaa
cttgaacatcaagtttctgagctccgagagaaattaggtgacatgaattatcgccagtta
atggaacaaaaaacaaaattgaccgaggaacaagaagatctattcagagaaaaaaacatt
gaacgaggaggtcaggatgaaatagcactcaacattaagaaattgaagaacgagctcgat
aaagaaatctttaggatggcacacaaaaattacgtaaataaatgtgctgaagttttggtg
caagagcaaactgtgaaagatataacattgtacatcacagctctagatcaggcaataatt
gagtatcacgaagagcgaatggctacggtaaacaaaatcatacttaatctttgggagcta
atctataagggcaaagacacaacatccattcagattcacactgaacgcactgaaggacaa
tctgagaagaaaagggtttataattacaaagttgtgcaagagaaacagaaagttaccatg
gacatgaaaggacattgcagcgctggtcagaaggtactggcttcaattattattagaatg
gctcttgctgaaacatttgccaaaaattgcggtatatttgcgttggatgagccaacaaca
aaccttgatgtcagtaacatggatagtttagctaaagcacttgctacgattgttaatatt
cgttcaaagcatcagaaaaatttccaattaatcgttatcagccacgacgaatcttttgtg
aagcaattgaccagagtgaacagaatcaagagggtgcacgagctctatcgtaatgaaatt
ggactaacgcagattaagacgtggtgcgttgatgttaccgcaagcgatgccccagttgat
ccagattcctctgaagaagaggaagccaaagataccgaggcagaaatccgttcacgtaaa
cgaagaagacttgcagaagaaagaaaacagctggctcttactgcgtcccgtaaaaagaag
atcgcaagaatggacatctaa

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