KEGG   Athalia rosae (coleseed sawfly): 105685961
Entry
105685961         CDS       T09776                                 
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
aroa  Athalia rosae (coleseed sawfly)
Pathway
aroa03030  DNA replication
aroa03410  Base excision repair
aroa03420  Nucleotide excision repair
aroa03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:aroa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    105685961
   03410 Base excision repair
    105685961
   03420 Nucleotide excision repair
    105685961
   03430 Mismatch repair
    105685961
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:aroa03032]
    105685961
   03036 Chromosome and associated proteins [BR:aroa03036]
    105685961
   03400 DNA repair and recombination proteins [BR:aroa03400]
    105685961
DNA replication proteins [BR:aroa03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    105685961
  DNA Replication Termination Factors
   ELG1-RFC complex
    105685961
Chromosome and associated proteins [BR:aroa03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    105685961
DNA repair and recombination proteins [BR:aroa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     105685961
  Check point factors
   HRAD17(Rad24)-RFC complex
    105685961
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 AAA_22 RuvB_N AAA_11 ResIII DUF815 AAA_14 AAA_assoc_2 AAA_16 AAA_24 DEAD AAA_30 AAA_5 AAA_7 RCF1-5-like_lid PhoH AAA_19 BrkDBD TIP49 Mg_chelatase Thioredoxin_6 ATPase_2 Glyco_hydro_57 AAA_3
Other DBs
NCBI-GeneID: 105685961
NCBI-ProteinID: XP_012255893
LinkDB
Position
1:8254640..8257772
AA seq 328 aa
MTLEAKTAPNLPWVEKYRPAHLDDLISHEEIIRTINKFIKENQLPHLLFYGPPGTGKTST
ILASARQLYTPAQFTSMVLELNASDDRGIGIVRGQILNFASTRTIFNDGFKLIILDEADA
MTNDAQNALRRIIEKYTENVRFCVICNYLSKIIPAVQSRCTKFRFGPLASEQVMPRLEHV
IEKENLVVTEDGKNALMTLSGGDMRKVLNVLQSTWLAYGSVTEETVYSCVGHPLPSDIRS
IANWLLNENYVLAYCKIQDLKTKKGLALQDILTELHLFVNRIEFPDNILINLVVKMADIE
RRVAAGCTEAVQLNALVAAFQCAREVQC
NT seq 987 nt   +upstreamnt  +downstreamnt
atgacgctggaagccaagactgcacctaaccttccatgggttgaaaaataccggccagcg
catctagatgatctaatatctcacgaggaaataataagaactataaacaaattcatcaaa
gaaaaccagctacctcatctactcttctatgggccaccgggaacaggaaaaacaagtacc
atactggcatctgctcgacagctttatacacccgcacaattcacttcaatggtattggaa
ttaaacgcttctgatgacagaggaattggcatagtgagagggcagatattgaactttgcg
agcacacggacaatcttcaatgatggcttcaagttgattatccttgacgaagctgatgcc
atgacaaatgatgctcagaatgcattacgaagaattattgaaaaatacaccgaaaacgtg
agattctgtgtaatttgtaattatctgagtaaaatcattccggcagttcaatccaggtgc
actaaattcagatttggtcctcttgcctcagagcaagtaatgccgcggcttgagcatgta
attgaaaaagaaaatcttgtagttacggaagatggaaaaaatgccttgatgacattaagc
ggtggtgatatgaggaaagtgttgaatgtcttgcaaagtacatggttagcctatggatca
gtgactgaggagacagtctactcttgcgttggccatcctcttccttcagatataaggagc
attgctaactggctactgaacgaaaattacgtattggcatactgcaaaatccaagacttg
aagacaaagaaggggctggcactgcaagacatactaaccgagcttcacttgtttgtgaat
agaatcgagtttcctgacaatatattgattaacctggttgttaagatggctgatatagag
cgaagagttgctgccggctgtaccgaggcagttcaattaaatgctcttgttgcagctttt
cagtgtgcccgtgaagttcagtgttga

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