Athalia rosae (coleseed sawfly): 105685994
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Entry
105685994 CDS
T09776
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
aroa
Athalia rosae (coleseed sawfly)
Pathway
aroa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105685994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aroa03019
]
105685994
Messenger RNA biogenesis [BR:
aroa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
105685994
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
105685994
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GFIT
Motif
Pfam:
ECR1_N
EXOSC1
S1_RRP4
ssDNA_TraI_N
Motif
Other DBs
NCBI-GeneID:
105685994
NCBI-ProteinID:
XP_012255980
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Position
7:5250172..5251314
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AA seq
198 aa
AA seq
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MEEKKEPIICVPGQRLCLSDKFNVPGPGTYEQHGYIYSKLAGVVNLIKTEQTCTVEVQGM
REQSIVPAPGDIVTAMVMLVNQRFCKCAIKCIGDVVLTRPYRGILRREDVRATEKDKIEM
YKSFRPGDIILARVLPLTEVHTYQLTTAENELGVVIAHSEEGVSMVPVSWTEMQCPKTFN
KEFRKVAKVVPEHVINEQ
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaagaaagaacctatcatttgtgtgccaggacaaaggctgtgcttgtcggat
aaattcaacgtacctggaccagggacttacgaacagcatggctacatctattcaaagttg
gctggcgttgttaatttaattaagactgaacaaacatgcaccgtagaagtacagggtatg
agagaacaaagtattgtcccagcccctggcgacattgtcacggcaatggtcatgcttgta
aatcaaaggttttgtaagtgcgccatcaaatgtatcggtgatgtggttttgacacggccg
tacagaggaattttgcgcagagaagatgttcgggcaacggaaaaagacaaaatcgaaatg
tacaagtcgttcaggccaggggatataattttagccagagttttaccactcaccgaagtt
cacacatatcaactcacgacggctgagaacgaattgggagtcgtaatagctcatagcgaa
gaaggagtttctatggtgccggtcagttggacagaaatgcaatgtcccaagacattcaat
aaagaatttcgcaaggttgctaaggttgttccggaacatgttataaatgaacaataa
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