KEGG   Athalia rosae (coleseed sawfly): 105685994
Entry
105685994         CDS       T09776                                 
Name
(RefSeq) exosome complex component CSL4
  KO
K07573  exosome complex component CSL4
Organism
aroa  Athalia rosae (coleseed sawfly)
Pathway
aroa03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:aroa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    105685994
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aroa03019]
    105685994
Messenger RNA biogenesis [BR:aroa03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     105685994
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     105685994
SSDB
Motif
Pfam: ECR1_N EXOSC1 S1_RRP4 ssDNA_TraI_N
Other DBs
NCBI-GeneID: 105685994
NCBI-ProteinID: XP_012255980
LinkDB
Position
7:5250172..5251314
AA seq 198 aa
MEEKKEPIICVPGQRLCLSDKFNVPGPGTYEQHGYIYSKLAGVVNLIKTEQTCTVEVQGM
REQSIVPAPGDIVTAMVMLVNQRFCKCAIKCIGDVVLTRPYRGILRREDVRATEKDKIEM
YKSFRPGDIILARVLPLTEVHTYQLTTAENELGVVIAHSEEGVSMVPVSWTEMQCPKTFN
KEFRKVAKVVPEHVINEQ
NT seq 597 nt   +upstreamnt  +downstreamnt
atggaggaaaagaaagaacctatcatttgtgtgccaggacaaaggctgtgcttgtcggat
aaattcaacgtacctggaccagggacttacgaacagcatggctacatctattcaaagttg
gctggcgttgttaatttaattaagactgaacaaacatgcaccgtagaagtacagggtatg
agagaacaaagtattgtcccagcccctggcgacattgtcacggcaatggtcatgcttgta
aatcaaaggttttgtaagtgcgccatcaaatgtatcggtgatgtggttttgacacggccg
tacagaggaattttgcgcagagaagatgttcgggcaacggaaaaagacaaaatcgaaatg
tacaagtcgttcaggccaggggatataattttagccagagttttaccactcaccgaagtt
cacacatatcaactcacgacggctgagaacgaattgggagtcgtaatagctcatagcgaa
gaaggagtttctatggtgccggtcagttggacagaaatgcaatgtcccaagacattcaat
aaagaatttcgcaaggttgctaaggttgttccggaacatgttataaatgaacaataa

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