Athalia rosae (coleseed sawfly): 105686004
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Entry
105686004 CDS
T09776
Name
(RefSeq) protein polybromo-1 isoform X1
KO
K11757
protein polybromo-1
Organism
aroa
Athalia rosae (coleseed sawfly)
Pathway
aroa03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105686004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aroa03021
]
105686004
03036 Chromosome and associated proteins [BR:
aroa03036
]
105686004
Transcription machinery [BR:
aroa03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
105686004
Chromosome and associated proteins [BR:
aroa03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
105686004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_WDHD1
HMG_box_2
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
105686004
NCBI-ProteinID:
XP_012255949
LinkDB
All DBs
Position
1:8338435..8349504
Genome browser
AA seq
1728 aa
AA seq
DB search
MFLLVNQGSSRRQTSKPNHFQATRITSPHLAARASFPHGVHQQVCKLDKSTRNSISFHPH
VIIIIEDQHRNICFLKMNKRRRTSSVASRGTEDDPDDVQPEPTKRRRKLDPSDLCQQLYD
VLRNQKREDGTLLCDAFIRVPKRRQEPGYYEVVSNPIDLLKVQQKLKTDEYRDMDDLAAD
IQLMVNNAKAFYMRTSPEYKDATELWELCLTTKNRIMDEYEDSEQKGKIILKVGRLARKV
TTRQDDAEDTSESSTNPDEESMQPYEDLFAAVMTATDPQDNNRPLNTPFQLRPSKKLYPE
YYEVIENPVDLKTVARRIQEGAYASLIEMERDLMLMCRNACQFNEPGSQIYKDAKLLKKI
IVSAAKKQESNAGGMLPKSMSTVTSTRSKRGRSAVQSLVAATAALADEDEDESDDEEEDV
NDGEESDNPQWQLFQTIKTAPNSQGVRMSEYYWKLPSKRNYPDYYKAIKNPISLYQIRTK
IKKGEYGTVSEVAGDMNIMFENAKKYNVHTSRLYKCAAKLQKIMQEKVQELLEFDQDSES
DSDSENNLQQPKLIKRASNVLTRGKYKDNVPLKKRLHVLVKCVMEYVCEDGRQPMLMFME
KPSKKLYADYYQIIQEPIDMLGIEANIKAEKYQSENELIADFKLMFNNCRQYNEEGSLIY
EDANVLEKVLMDKVKELGPLSESGKPVKSAASTPTRNVGRPKKVVPLHVQKLRTMYDTIK
EYHDTKGRQLSQIFMKLPNKNEYPDYYEVIKQPMNMEKIASILKNNGYDSLDELVSDFIL
MFDNACKYNEPDSQIYKDALILQRLVLQTKVQLSEDDESVPDVAAAVQEILATIFTALYN
HQDEEGRCYSDSMAELPEHDIIDGKKVRGLSLDLIKRRLDRGAYKRLDRFQEDVFTCLER
ARKLSRSDSQPFEDSVELQAFFLRTRDDVTRSGDLLHSPALNYTLLNLSEQVADLKRAKL
QQELSLPQEEESCDASDVKDVGNVSNVGNTVSGGGVAMSFNQEVYRPGDFVYVEPTERGM
ELSVMLIERLWTNAEGQQMLYGNVFYRPSETYHVASRKFIEKELFKSDSHLAVPLAKVAG
RCSVLSVKDYFRMRPEGFPEKDVYVCESRYSTKARAFKKIKVWNFDPEHLKLVPRERPLE
TKRVVSVYKERLEKHKEEIAELEEGEKLIEKEKPNVITFNSDDMENTYFEQYNTCVGPIK
TGDFVYVATDGGRQQISQVDTIWSTKDGKCFFKGPWLLMPPEIPHAPTKLFYKQEIFLST
VDGTHPIVAIVGKCAVLDYGEYVCSRPTEIPEDDVFICESTYDEGKNLMRKLGTEGLKKF
NHSSEVTDDEIYFFRRPINPPKVPSEVAQAQIQVKAVIPATAHFEMEASPLLPKLESDIL
NMGVGLGVGVGVGVGEDSMDAGGPPSVGSTEAQPILSNIQTPVSAKKKATGKKLVTGYIL
YSSKMRTQITQNNPESSFGEISRIVGNEWRKLPAGEKQAWEERAIKMNEDGGQIVNKPVA
VMGVGPQPDQVFECCWDGCDWQFEDMTDCIDHCIAEQNGHVQASFANATADVEFQCQWRG
CGRTKKSVPPFPSVQRLARHVKEVHILKSNGRVVPPAERSKNYMASKGPTILPPMETETS
AAATQTSGVPAVKQPEPVFITVPPRPSRVLHSDAYLRYIEGLNTENRYISNWDKQMNASA
ENTQIPDVAKLPAEWLGNGVGNHGNVVNALWTLRDMMMRDVLAINKSL
NT seq
5187 nt
NT seq
+upstream
nt +downstream
nt
atgtttctgctggtaaatcaggggtcttctagacgccaaacctccaaaccaaatcatttc
caagccacacgcatcacatcgccgcacctggcagctagggcaagctttccgcatggcgtc
caccaacaagtttgtaaacttgataaatcgactcgaaattcaataagctttcatccacat
gtgattataattattgaagatcaacacaggaatatttgcttcttaaagatgaataaacgt
cgtcgaacttcatcagtcgccagccgaggcacagaagatgatcctgatgatgtacaacca
gaacctactaagcggagaaggaaattagatccgagtgacctttgccagcaattgtatgat
gtccttcgtaatcagaaacgagaggatggaacgttgttgtgtgatgcttttatccgtgtg
ccaaaacgtcggcaagaacctggatattatgaagttgtctcaaaccctattgatctactg
aaagttcaacaaaagctcaagactgatgagtacagagacatggatgatttggcagctgac
atccaacttatggtcaataatgccaaggctttttatatgcgaacgtccccagaatacaaa
gatgcaactgaactttgggaattgtgtctcacaacgaaaaatcgtataatggatgaatat
gaagactctgagcagaagggcaagatcattcttaaggttggcagactggccaggaaagta
acgactcgacaagatgatgcggaagatacttctgaaagctctactaatcctgatgaggaa
tctatgcaaccatatgaagatttgtttgcagcagttatgacagcaacagacccacaagac
aataacaggccactaaatactccatttcagctcagaccatcgaaaaagctttaccctgag
tattacgaggtaattgagaatccagtagacctgaagacggtggcacggcgaattcaagaa
ggagcttatgcaagcttaattgaaatggaaagagatctaatgcttatgtgtcgtaatgcc
tgtcagttcaacgaacctggctcacagatatacaaagatgctaagctgctgaaaaaaata
attgtctctgcagcaaagaagcaagaatcgaatgctggtggcatgctacccaaaagtatg
tccactgtaacatcaactagaagtaaaagaggaagaagtgctgtacaatccctcgtagca
gcaaccgctgcactagcagatgaagacgaagatgaaagtgatgatgaagaggaggatgtt
aacgatggcgaagaatcagataatcctcagtggcaactcttccaaacaatcaagaccgct
cccaatagtcaaggtgtgcgaatgagtgaatactattggaaattaccttctaaacgaaat
tatcccgattattataaagcaattaaaaatccgatatctctctaccaaatacggactaag
ataaagaaaggggaatatggtaccgtcagtgaagttgctggcgatatgaacatcatgttt
gaaaatgctaagaaatacaatgttcacacatctcgcctatacaagtgtgcagcaaaatta
caaaaaattatgcaagaaaaggtacaggaacttcttgaatttgatcaggattcagagtca
gacagtgattcagaaaataatctacaacagccaaagctgataaaacgtgcgtcaaacgtt
ttaacaagaggaaaatataaggataatgtaccattgaaaaaaaggctacacgtgcttgtt
aaatgcgtaatggaatacgtttgtgaagatggtagacaacccatgctcatgtttatggaa
aaaccctcaaaaaaattgtatgcagactattatcaaattattcaagaacccattgacatg
ttaggcattgaggctaacattaaagctgaaaaataccagagtgaaaatgaactcattgct
gacttcaagttgatgttcaataattgtcgccaatacaacgaagaagggtcccttatctat
gaagatgctaatgtcttggagaaagttttaatggacaaagtaaaagagctggggcctttg
tcagaatctggaaaaccagtaaaatcagcggcatcaacacccacaaggaatgtgggaaga
cctaagaaggtggtaccattacatgtacaaaaattgcgaactatgtacgatacgataaaa
gaatatcatgacactaagggaagacagctatctcaaatatttatgaaactaccaaataaa
aatgagtatcctgattattatgaagttatcaaacagccaatgaacatggaaaagattgcc
tccattttaaagaataacggatatgatagcttggacgagttggtttcagattttattctc
atgtttgacaatgcctgcaagtataacgagccggactctcaaatttacaaggatgcttta
atcctccagcgtttagtgcttcagaccaaagtacagctgagcgaagatgatgagagcgtt
cctgatgttgctgctgcagtccaagaaatattagcgactatatttactgcgttatataac
caccaagatgaagagggacgatgctattcagattctatggctgaacttcctgaacacgac
atcatcgatggcaaaaaagtgcgagggctatctctggatttaataaaacgtcgtttggac
agaggggcttataaaagattagatagattccaagaagacgtattcacatgtttagagaga
gcacgtaaactatcacgtagcgattctcagccctttgaagatagtgtcgaacttcaagca
tttttcctacggacacgagatgacgttacgcgtagtggagatcttctgcattctccagca
ctcaactacacactcctaaatctttctgaacaagttgcagatttaaaacgtgccaaactt
cagcaagagctatctttaccacaagaagaagaaagctgtgatgcttcggatgttaaggat
gtaggtaatgttagtaacgttggaaatactgtaagcggcggaggtgtagctatgagcttc
aatcaagaagtttatagacctggtgatttcgtgtacgtagaaccaacggaacgcggaatg
gaactaagtgtaatgctcatagagcgcctatggacaaacgcagagggccagcaaatgttg
tatggtaacgttttttatcggccaagtgaaacgtaccatgttgcctcaagaaaattcata
gaaaaggaattattcaaaagtgactctcatctagctgtacctctggctaaagtcgcaggg
cgatgttctgtcttaagtgtaaaagattatttcagaatgcgacctgagggttttcccgaa
aaagatgtatatgtatgcgaatcacgctattctacaaaagcacgagcttttaaaaaaatc
aaggtatggaatttcgatccagaacatctgaaattggttccgagagaacgacctttagaa
acgaaacgtgttgtttccgtctataaagaacgccttgaaaaacataaagaagagatagcg
gaattggaagaaggagagaaactcatcgaaaaggaaaagccgaatgtgataacgttcaat
tcagatgacatggaaaatacatatttcgagcagtataatacttgcgtgggacctatcaaa
actggtgactttgtttatgtggcaacggatggaggtagacagcaaatctcacaagttgat
actatatggtccacgaaagatgggaagtgctttttcaaaggaccttggttattaatgcct
ccagaaattccacatgcccctacaaagttgttttataaacaggaaatatttctatctact
gtcgatggaactcatcctatagtcgctattgttggaaaatgtgcagtacttgattacggg
gaatatgtgtgtagtaggccaacagaaattccagaagatgacgtattcatatgcgaatct
acgtatgacgaaggtaaaaatttgatgcgaaaacttggaacagaaggattgaaaaagttc
aatcatagttcagaggtgactgatgatgaaatatatttcttccgaagaccaatcaaccct
cccaaagtgccaagtgaggtggctcaggctcaaatccaagtcaaggcagttatacctgcc
acagctcattttgaaatggaagcatcaccattactaccaaagctggaatccgacatacta
aacatgggagttggcttaggagttggagtaggagtaggagttggggaggacagcatggat
gctggcggaccaccgtccgtcggctccacggaagctcagccaatcctttcaaacattcag
acacctgtctctgctaagaagaaagccactggtaagaaattagttacgggctatattttg
tattcaagtaaaatgcgaacgcagattacgcaaaacaatcccgaatcgtcgtttggggag
attagcagaattgttggcaacgagtggaggaagctaccagctggagagaaacaagcatgg
gaagaacgagcaattaagatgaatgaagatggaggacagatcgttaacaaaccagtggct
gttatgggggttggccctcagcctgaccaggtgtttgaatgttgctgggatggttgtgac
tggcaatttgaggatatgactgattgcatcgatcattgtattgctgagcaaaatggtcat
gttcaggcatcttttgccaatgccaccgctgatgttgagtttcaatgtcagtggcgtggt
tgtggtcgcaccaaaaagtctgttcctccgttcccaagtgtacaaagacttgcaaggcac
gttaaagaagtccacattctcaaaagtaacggtcgagtcgttccccctgcagagagaagc
aaaaattacatggcttccaaagggccaacgatactaccgccaatggaaactgaaacgtca
gcagctgcgacacaaacgagtggtgttcctgctgttaagcaacctgaaccagttttcatt
actgtgccaccccgccccagtcgtgtcttgcattctgacgcttacttaagatacattgaa
ggtctaaacacagaaaatcgttacatatcaaattgggacaaacaaatgaatgctagtgct
gaaaacacgcaaattccggatgtggcaaaattgccggcagagtggttaggaaatggggtt
ggtaatcatggaaatgttgtaaatgccttgtggacgctcagggacatgatgatgcgtgac
gtactggcgattaataaatcattatag
DBGET
integrated database retrieval system