Athalia rosae (coleseed sawfly): 105686016
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Entry
105686016 CDS
T09776
Name
(RefSeq) nuclear RNA export factor 1-like
KO
K14284
nuclear RNA export factor
Organism
aroa
Athalia rosae (coleseed sawfly)
Pathway
aroa03008
Ribosome biogenesis in eukaryotes
aroa03013
Nucleocytoplasmic transport
aroa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105686016
03015 mRNA surveillance pathway
105686016
03008 Ribosome biogenesis in eukaryotes
105686016
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aroa03019
]
105686016
03009 Ribosome biogenesis [BR:
aroa03009
]
105686016
Messenger RNA biogenesis [BR:
aroa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105686016
mRNA cycle factors
Stress granule specific factors
105686016
Ribosome biogenesis [BR:
aroa03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
105686016
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NXF_NTF2
LRR_NXF1-5
TAP_C
NTF2
Tap-RNA_bind
UBA_4
UBA_8
Motif
Other DBs
NCBI-GeneID:
105686016
NCBI-ProteinID:
XP_012255967
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All DBs
Position
1:complement(7988296..7992579)
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AA seq
524 aa
AA seq
DB search
MQHSVPFTPVQLDPSTALKITMGNSMFQERSLMGRPDVWHRIKIFRAARFEKDFVLKLIV
NAVEPADLIPVKYQACGEDTVFIARNCGPALDKLCRSNLIINNPGGDSLVVEIILGYASI
HDLKVNMQSLLLTALKRRYDNKKKILHLDRFDKDKDMSKTVYCPLSQLRTFSYVLKVARN
ALHGFEHLNLQHNELFNLSSIESSNLSPMLKSLDLRYNKLLGMEALTPLRGLHITDIWLD
GNPVCENYSSPEQYIESARRYCPQLTKLDGVYIGAPGMPLTYNTFFRTGEKKKLANQFVE
HFFTLYDQKDRMILKGLYHREAFFSMTLGIPPALAAKKGLDKFIAENRNLVKLADPARSS
KLLFRGTDNILTALMKLPLSLHDSSSFRCDLLYDNDDLVIIAVEGVFKILEKTPQILSFN
RTFILLAGEDNEYNIINDQYHIDFAPLGRSIDIYQDEAMETTFKPTCFNHREKKELIITL
RNVSTMNYEWCSIYLKDTNWDLRKAISNFMEKYLQSSVPPQAFR
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgcaacacagtgtgccttttacaccggtacaattggatccatctacagcattgaaaatc
acgatgggcaattcaatgtttcaagaaagatccctgatgggtcgtcctgacgtttggcac
aggataaaaatatttagagcagctcgattcgaaaaagactttgtcttgaaactcatagtg
aatgctgttgagcctgcagacctgattccagtgaagtaccaagcttgtggtgaagacacc
gtattcatagccaggaattgcgggccagctcttgataagctctgcagatcaaacttgatt
atcaacaaccctgggggagactcactggtggttgaaataatattgggatatgcttcgatt
cacgatctcaaagtgaatatgcagtctttgctactgactgctctgaaaaggaggtatgac
aataaaaagaaaattcttcacttggacagattcgataaggataaagacatgtccaagact
gtttattgtccattgtcgcaactcaggacctttagctacgtcctgaaagtagcaagaaat
gcgctgcatggttttgagcacctgaatttgcagcacaatgaactattcaatctatcttcc
atcgagagttctaatctaagtcctatgttgaaatcgctggacctccggtataacaaactg
ctaggaatggaggcgcttactcctttacggggcctgcatatcacagacatttggcttgac
gggaatcccgtttgtgagaattattccagcccagaacagtacattgagtctgcacgaaga
tattgtcctcaattaacaaagttagacggagtttatattggagcaccaggaatgcctttg
acctataacacattctttcgtactggtgaaaagaagaaacttgcaaatcaatttgttgaa
catttctttacactctatgatcagaaagatagaatgatattgaagggtctctaccatagg
gaagcttttttctcaatgacattgggtatcccccctgccttggcagccaaaaaaggcttg
gataaattcattgctgaaaacagaaatcttgttaaattagctgatcctgcaagaagtagt
aaactactttttcgtgggactgacaatattctgacagccttaatgaaactaccactttct
ctgcatgacagcagctctttcagatgtgatttgctgtatgataatgatgatctggttatc
atagctgtcgaaggagtcttcaaaatcctcgaaaagactccacagattctatcattcaac
agaaccttcatattgttagctggagaagacaacgagtataacataatcaatgatcagtat
cacattgattttgctccactaggtagatctatagacatttatcaagatgaggcaatggag
actacttttaagccaacttgtttcaaccacagagaaaaaaaagaattaataattactctg
aggaatgtttccacaatgaattacgaatggtgttctatttacttgaaagatacaaactgg
gaccttcgaaaagcaatctcgaactttatggaaaagtatctgcaatcaagtgtgcctcca
caagcattccgctga
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