Athalia rosae (coleseed sawfly): 105686037
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Entry
105686037 CDS
T09776
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
aroa
Athalia rosae (coleseed sawfly)
Pathway
aroa03440
Homologous recombination
aroa03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105686037
03460 Fanconi anemia pathway
105686037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aroa03032
]
105686037
03400 DNA repair and recombination proteins [BR:
aroa03400
]
105686037
Enzymes [BR:
aroa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
105686037
DNA replication proteins [BR:
aroa03032
]
Eukaryotic type
DNA Topoisomerases
105686037
DNA repair and recombination proteins [BR:
aroa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
105686037
FA (Fanconi anemia) pathway
105686037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
Zn_ribbon_recom
Toprim_4
Zn_Ribbon_TF
Motif
Other DBs
NCBI-GeneID:
105686037
NCBI-ProteinID:
XP_012256009
LinkDB
All DBs
Position
1:complement(8378171..8382704)
Genome browser
AA seq
1050 aa
AA seq
DB search
MRLLDQANVSRPIFAIHSFWGGLVRFKSNNSKAEKNQSNQMKVLNIAEKNDAAKGIAGYL
SRNSSRRREGLSVYNKIYEFETQLWGQQCKMTMTSVSGHLLTYEFVGGYRSWQGCNPLSL
FEAPVTKQCPEDYMKIKKTLEREVKGSQALIIWTDCDREGENIGFEIIQVCQAVKPNIKI
YRAKFSEITAQSVYRAIHNLEEPNKAISDAVDVRSELDLRIGAAFTRFQTLRLQKVFPQS
LAEMIISYGSCQFPTLGFVVERFLAIESFKPEPFWKIKVTDVRNELSVEFRWERNRLFEE
LPCQIFLDMCLESPNATVEKITCKPKSKWRPLPLDTVELAKLGSRKLRLNAKETMKIAEK
LYTQGIISYPRTETNIYPKELNLPPLIEQQTSHPEWGLFAQQVLQNGPSPRQGKKSDGAH
PPIHPTKYITTLGGNEARLYEFIVRHFLAGLSKDAEGQETIVNISIANEKFIASGLRIIA
KNYLEVYPYETWNAKEIHAYSEGETFLPTSIEMAHGETSAPNLLTEADLIALMDKHGIGT
DATHAEHIEKIKARQYVGLKDEKYFIPGKLGIGLVMGYDSMGFHMSKPHLRAGLENDLKL
ICDGVKLPADVLKDQISRYKAVFVTTLQKANLIDNALAHYLDEAPAHVQNVEIANPVLEQ
TVFKCPKCGSNMLLKDRKNSAGKYIGCIAYPTCSNAIWFPATVENIELLNDTCGRCPGNM
PIFKFSIRTGTIPILGSSYTSCIGGCDTLLNETFSIRNQNVQRVPQSSNDSGVATDNSNP
RINSTLSNTSWNPRTNLETRNPQRQINAQTFNATQNGTDRNDSGNSTWGSSSFTNVRHHD
STNWSSNQNNQMNSRDNTILCTCHEEAKKLTVRKEGLNQGRQFYKCAKPQGSGCEFFLWA
EDESMQATHHNDNDQQPSRSNNSNNDNQTRQRPTNTRADRDTRNSSTHKGPVTCTCGEPA
RKLTVHKEGPNKGKEFYGCPKGIGSGCKFFKWAGEVDDNNVGMSSDSAQVTNRVGHPSNS
NASRARNARRCGSCGEEGHTRRTCQSTAPD
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcttttagatcaagctaatgttagccggccaatttttgctatacacagcttctgg
ggaggacttgtcagattcaaaagcaacaattctaaagcagagaaaaatcagagtaatcaa
atgaaagtgttgaatatagcagagaaaaatgatgctgccaaaggtatcgcaggctacctg
tcgcggaattcttcaaggcggcgagaggggctatcagtgtataacaaaatttatgaattc
gaaactcaactatgggggcaacaatgtaagatgacaatgacgtctgtttcgggtcattta
ttgacctatgagttcgttgggggatatcgtagctggcaaggatgcaacccactgtcacta
tttgaagcacctgtgacaaaacaatgccccgaggattatatgaaaataaaaaaaacctta
gaaagagaggtaaaaggttctcaggcactcataatctggacagattgtgatagggaaggt
gaaaacattggttttgaaattatccaagtttgccaggctgtgaaacccaacatcaagatt
taccgtgccaaattttctgagatcactgcacagtcagtgtatcgagcaattcataatttg
gaagaaccaaataaagcaatcagtgatgctgttgatgttcgaagtgaactggatttgaga
ataggagccgccttcacaagatttcaaacactgagacttcaaaaggtttttccacaaagc
ttagcagagatgataatcagctatggaagttgccagttcccaacactaggatttgttgtc
gaaagatttctagctattgaatctttcaaaccagaaccattttggaagattaaagtgaca
gacgtgcgtaatgagctttcagtcgaatttagatgggaaagaaatcgtctatttgaagaa
ttaccttgccaaatattcttagacatgtgccttgaatctccaaatgccactgtagaaaaa
atcacttgcaaacccaaaagcaagtggagacctttaccactggatacagttgaattggct
aaattgggttcccgtaaattgagattgaatgcaaaggaaacaatgaaaatagcagagaag
ttgtatactcagggtattataagctatccgcgaacagaaacaaacatatatccaaaagaa
ctcaacttaccgccactgatagaacagcagactagtcatccagaatggggactgtttgca
caacaagtattgcaaaatgggccttctccaagacaaggaaagaagagcgatggcgctcac
cctccaattcaccccacaaaatatattactacgctaggaggaaatgaagcacgcttgtat
gagttcatagttcgtcatttcctggctggcctttcaaaagatgcggagggtcaagaaact
attgtcaacattagcatagctaacgaaaaatttattgcaagtggacttcgtatcattgct
aaaaattatctggaagtttatccatatgagacttggaatgcaaaagaaattcatgcatat
tcagagggcgagactttcctgcccactagcatagaaatggctcatggagaaacttcagct
ccaaacctgttaactgaggctgatttgattgctctgatggataaacacggaattggaacg
gatgccacacatgcagaacatattgaaaaaataaaagcgaggcaatatgtcggcctgaag
gatgagaaatattttatccctggaaaactcggaatcggattagtcatgggatatgacagt
atgggatttcacatgtccaaacctcatctccgagcaggattggaaaatgatctcaaatta
atatgcgatggtgtaaaacttccggcagatgttttgaaagaccaaatatctcgatacaaa
gccgtatttgttacaactttacaaaaagcaaacttgatagataatgcactagcccattac
ctcgatgaagcgccggcgcatgtacaaaatgtcgaaatagcgaatcccgtactagaacaa
accgtgttcaaatgcccaaagtgtggaagtaatatgctgttgaaagacaggaaaaattcc
gctgggaagtatattggttgcatagcttatccaacctgcagcaatgctatctggtttcca
gcaacggttgaaaatatagaacttctgaatgacacttgtggcagatgcccagggaatatg
cccatattcaaatttagtatacgcaccggtacaattccgatcttaggttcctcttacact
tcatgcattgggggatgtgacacattactcaatgagacttttagcattcggaatcaaaat
gtgcaacgtgtcccacagtcgagtaacgatagtggcgtggccactgataactcaaacccc
aggattaattctactctttcgaacacaagctggaatcccagaacaaacttggagacccga
aatccacaaagacaaattaatgcgcagacctttaatgcaacacaaaatggtacagatagg
aatgactctggtaactccacttggggttcatcctcatttacaaatgtgcggcaccatgat
agtaccaattggtctagtaatcaaaataatcaaatgaatagtagagataatacaatcttg
tgtacttgtcatgaagaagcaaaaaagctcactgtgcgtaaagaggggctgaatcaaggg
agacaattttacaaatgtgccaagccacaagggagtggttgtgaattttttctatgggca
gaagatgaatctatgcaagcgactcaccacaatgataatgaccaacagccctcaaggagt
aacaatagcaacaatgataatcaaactaggcaaagaccgactaataccagggctgacaga
gataccagaaattcatcaacccacaaagggccagtcacatgtacttgtggagaaccagca
aggaagctcactgtgcataaagaagggcctaataaaggtaaagaattctacggatgtcca
aaaggtataggtagcggatgtaaatttttcaaatgggctggtgaggtggacgacaacaac
gtgggtatgagcagtgatagtgcacaagttactaatcgcgtagggcatccatcgaattca
aatgcttcaagagccagaaacgcaaggagatgtggatcatgtggagaagaaggtcatacc
agaagaacgtgccagtcaactgccccagattga
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