Athalia rosae (coleseed sawfly): 105686216
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Entry
105686216 CDS
T09776
Name
(RefSeq) ran GTPase-activating protein 1
KO
K14319
Ran GTPase-activating protein 1
Organism
aroa
Athalia rosae (coleseed sawfly)
Pathway
aroa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105686216
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aroa03019
]
105686216
Messenger RNA biogenesis [BR:
aroa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
105686216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
RanGAP1_C
LRR_4
LRR_8
DDHD
DUF6033
CDC45
DUF5520
Nop14
Motif
Other DBs
NCBI-GeneID:
105686216
NCBI-ProteinID:
XP_012256277
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All DBs
Position
8:complement(4822911..4825855)
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AA seq
592 aa
AA seq
DB search
MSSFGFSEIQKQLQQATEKTCQTGVSFNGKSLKLNSENDAEIVVKAIQECPSLEYLDLEG
NTLGPDAAKAVANALEKKGSSLKRALWKDMFTGRMKTEIPLALEYLGAGLCVAGTRLVEL
DLSDNAFGPIGVRGLAILLSSSACYTLRELRLNNNGLGITGGKMLAKALLDCHANSSKEN
PAAPLALRVFIAGRNRLENEGAEALAEVFTLLKTLEEISMPQNGIYHRGVSALAKAFSAN
PMLKILNLNDNTVGPKGARALAKALPNLSELERINLGDCLLKTRGAIVLAEALAIDGAQP
NLIELNLSYNEIGASSADAIVAAIANKHDLETLVLDGNTFGQKGRRTLTEGWQTNARQKV
SFVATLEEDESESEEESKSGSESENDDEDESSDQEAKTSETEKEEDENKEKDSKEVTVQD
FLKSPSAENLLRLQGDKIQLILKHAEGSDNGEEESETYIEELVKSVMKVSSLCSSGYMDA
RIEAERLTEALYTDLFAFATTNDQVPRLNNALLINLGLIKSENKAAGRIDWNLEGCFKAL
ESMSLKEFFLPQTVDTLKVFIERPAKSGRPWADPFQEAKASLKTVLDQIRST
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgagttcattcggtttcagtgagatacaaaaacagctacaacaggccactgaaaaaacg
tgccaaactggcgtctctttcaatggaaaatcgctcaaactgaacagcgaaaatgatgct
gaaattgtggtcaaagctatccaggaatgtccgagcctggaatacctggatttggaagga
aataccttaggtccggatgcggcaaaggcagttgcaaatgcattggagaagaaaggctct
tctttgaaacgagccctctggaaagacatgttcaccgggcgcatgaaaacggagatacca
ctcgccctggaatacttgggagcaggactttgcgtcgccggaacacgtctcgtcgaactt
gacctcagcgacaatgcttttggtcccatcggagttcggggcttagctattttgctgagt
tccagtgcatgctacaccctcagagaactgaggctaaataataacggccttggtataacc
ggtggaaaaatgttggccaaagctctgctcgactgccacgcaaatagttctaaagaaaat
cccgcagcacctctagccctgcgagtttttatcgctggacgtaatcgattggaaaatgaa
ggagccgaagcattggctgaggttttcacactgctcaagacactggaggaaatttccatg
ccacagaacgggatctaccatagaggcgtcagcgctctggcaaaagcattttcggcaaac
ccgatgttgaagattttgaacctaaatgacaacacagttggaccgaaaggagcgcgagcc
ttagccaaggctttgccgaacctgtcagaactggagcgtattaatctaggagattgctta
ctcaagacacgtggagcaatcgttctagctgaagccctggcgatagacggagcgcaaccc
aatctcatagaactgaatctaagctacaacgagatcggagcttccagcgcagacgcgata
gtcgcagccattgcgaataaacacgatctggaaactctggtgttggacggaaatacgttc
ggccaaaaagggagacgcactttgaccgaaggttggcagaccaatgcccgccagaaagtg
tcgtttgtagcaaccctcgaggaggacgagtcggagagcgaggaggaaagtaaaagtgga
agcgaaagcgagaatgacgatgaagacgagagcagtgatcaagaagccaaaacttctgag
accgagaaagaggaggacgaaaacaaagaaaaagattctaaagaagtcactgttcaggac
tttttgaagagtccatccgccgaaaatctacttcgactacagggcgataaaatacagttg
atcttgaagcacgccgagggttcggacaacggtgaagaggagagcgaaacatatatagag
gaattggtcaaatctgtaatgaaggtatcatctttatgttcgagtggctatatggacgcg
aggatagaagcagaacgactcacggaagcactctacacagatctctttgcctttgccacg
acgaacgaccaagttccccgactgaacaatgccttgctaattaatttgggtttgattaag
agtgagaacaaggctgctggacgcatcgactggaatctcgaggggtgtttcaaagcgctg
gagtcgatgagcctgaaagaatttttccttccccaaaccgtggacactttgaaagtgttc
attgaaaggcccgcgaaatctgggcggccctgggcagacccattccaggaagccaaagct
tcgctcaaaacagttctcgatcaaatacggtcgacttaa
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