Athalia rosae (coleseed sawfly): 105686315
Help
Entry
105686315 CDS
T09776
Name
(RefSeq) FACT complex subunit Ssrp1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
aroa
Athalia rosae (coleseed sawfly)
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aroa03000
]
105686315
03036 Chromosome and associated proteins [BR:
aroa03036
]
105686315
Transcription factors [BR:
aroa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
105686315
Chromosome and associated proteins [BR:
aroa03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
105686315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
HMG_WDHD1
HMG_box_2
SSRP1_C
Motif
Other DBs
NCBI-GeneID:
105686315
NCBI-ProteinID:
XP_012256415
LinkDB
All DBs
Position
3:3968766..3973346
Genome browser
AA seq
739 aa
AA seq
DB search
MDFLEFSDVTAEVKGVMSPGKLKMTDQHLIFKNQKTGKVEQISASDMEMVNYQKFVGTWG
LRIFLKNGTLHRFQGFKEGEQEKIAKFFTANYKKDMLEKELSLKGWNWGTAKFNGSVLSF
DVGHHTAFEIPLYYVSQCNTGKNEVTLEFHQNDDAPVSLLEMRFHIPVSDSMEQDPVEAF
HQQVMNKASVISVSGDAIAIFREIQCLTPRGRYDIKIFQSFFQLHGKTFDYKIPMSTVLR
LFLLPHKDSRQMFFVVSLDPPIKQGQTRYHYLVLLFNQEEETSIELPFTDKELKQKYNDK
LTKELSGPTYEVLGKVMKAISVRKLTGPGGFVGHTGTPAVGCSFKAAAGYLYPLERGFIY
VHKPPIHIRFEEIASVNFARGGGSTRSFDFEVELTSGVTHTFSSIEKEEYGKLFDFITSK
KLRVKNRGKTDKLKYNDDFGNSDQEDEPDAYLARIKAEAEERNEDDNQDSESESTDEDFN
PNQDESDVAEEYDSNVSPSDSDADSDASASSEKKVKEAKKEKKHKAAKTVSEKPRKPRKP
KKEKDENKPKRPTTAFMLWLNETREQIKADNPGIVVTDIAKKGGEMWRALSDKSKWEQKA
VKAKEDYAAAMKEYEAGLAETGGKSKEKPDKKKKETKKEAPASKVVPSGSFKSKEYISGD
ESSSGSDEETTKSGKDSGKKKKSDDDSEDDKKKKKENKRSAEDDSKGAKKTKKEESDVED
SEFEEPEEDTPASSDADSD
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggatttcctcgaattctctgatgttaccgctgaggtaaagggcgtcatgagtccagga
aaattgaagatgacagatcagcatcttatcttcaagaaccaaaagactggcaaagttgaa
caaatctctgcttctgacatggaaatggtgaattatcagaaatttgtgggaacatgggga
ctcagaatattcctgaaaaatggaaccttgcacagatttcagggattcaaagaaggggaa
caggaaaaaatagcgaaattctttactgcaaattacaagaaagatatgttagaaaaagaa
ctgagtttgaaaggttggaactggggtacggccaaattcaatggttctgtgctaagtttt
gacgtcggtcatcatactgcattcgagattccgctgtattatgtttctcaatgcaacacg
ggaaagaatgaagtcacgttggaatttcatcagaatgacgatgcaccagtaagtctctta
gaaatgagattccatattccagtgagtgacagtatggaacaagatcctgtcgaagcattc
catcagcaagtaatgaacaaagcatccgtcatcagtgtcagtggagatgcaattgcaatc
ttcagagaaatccagtgtctaacacctcgtggtcgctacgacatcaaaatattccaatca
ttcttccaacttcacggaaaaacattcgactacaaaatccccatgtccactgtgctcagg
ttattcttattgccacataaagacagccgacaaatgttctttgtggttagtttggatcct
ccgataaaacaaggacaaacacgatatcactacttggttttgttgttcaatcaagaagaa
gaaacttctatcgaacttcctttcacagacaaagagttgaaacaaaagtataatgataaa
ttgacaaaagaactatctggcccaacttatgaagttctaggaaaagtaatgaaggccata
agtgttcgaaaactcacaggacctggtggttttgtaggccatacaggaacaccagcagtt
ggatgttcgttcaaagcagctgcaggatacctgtacccgctagaacgagggttcatatat
gtccataagccaccgattcacatacgtttcgaagaaatagcctccgttaactttgcgcga
ggtggtggatcgacacgatcgttcgattttgaggtcgaattaacgagtggcgttacacac
actttcagtagtatagagaaggaagaatatggcaaactcttcgacttcattacatccaaa
aagttgagagtgaaaaataggggcaaaactgataagctgaagtacaacgatgactttggt
aacagtgatcaagaagacgaacctgatgcctacttggcaaggattaaagcagaagccgaa
gaacgaaatgaggatgacaatcaagactctgaatccgaatccaccgatgaagatttcaat
cctaatcaggatgaaagtgacgttgctgaggaatacgacagtaacgtgagcccatcggac
agtgatgcagactccgatgcatcagctagcagtgaaaagaaggtcaaagaggcaaagaag
gagaagaagcacaaggctgccaagactgtgtctgagaagccaagaaaaccacgtaaacca
aaaaaagaaaaagatgagaacaagcccaagcgtccgaccaccgctttcatgttgtggctc
aatgaaactcgtgaacaaatcaaggcagacaatcccggaatcgtcgttactgacattgct
aaaaaggggggagaaatgtggcgagcactgagtgacaaatctaaatgggaacagaaagca
gtgaaagcaaaggaagattacgctgcagccatgaaggaatacgaggcaggcttagctgag
actggtggcaagagcaaagaaaaacccgataagaagaaaaaggaaactaagaaagaagca
ccagctagtaaagtggtaccaagtggttcatttaaaagcaaagaatatatcagtggtgac
gaaagtagcagcggcagcgatgaagagacgactaaaagtggaaaggactcagggaagaaa
aagaaatccgatgacgatagtgaggatgacaagaagaagaaaaaggaaaataaaagatct
gctgaagatgatagcaagggagcgaaaaaaacaaagaaagaggagtccgatgttgaagat
agtgagtttgaggagcctgaggaagatacgcctgcatctagtgatgccgattccgattag
DBGET
integrated database retrieval system