Athalia rosae (coleseed sawfly): 105686410
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Entry
105686410 CDS
T09776
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X1
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
aroa
Athalia rosae (coleseed sawfly)
Pathway
aroa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105686410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aroa03041
]
105686410
Enzymes [BR:
aroa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105686410
Spliceosome [BR:
aroa03041
]
Complex A
U2 snRNP components
U2 related factors
105686410
Complex B
105686410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
ResIII
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
105686410
NCBI-ProteinID:
XP_012256637
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All DBs
Position
4:complement(4940124..4944547)
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AA seq
1048 aa
AA seq
DB search
MVRGGEKERHYRRRSRSRSATPEKKRRRSRSRERDREKTRHKERRSRSRERERERSDRRE
RSERERDRDRKRTPCQTSESDNIAHLRHEAKFSGDSKEKRLTGSKSSRSGKDRSNRSRSR
DRKDKDKGDNEDLPFDHTKLDKEEEQKRLELEMQKRRERIERWRAERKKKEIEATKKDGK
ASILANLQLPMKKWSLEDDSDEETPVILNVTKEIKEEGDIKEEPEVVPEEIKVEEEEVDP
LDAFMAEVQEEVRKVNKLDPNRSKSTNNGTGTGNSQSGGVVIVTGVAKRQVAKQKGELIE
QNQDGLEYSSEEEGENLHETAAGIANKQKRELAKVDHAATEYQPFRKSFYVEVPEIARMT
PEEVDIYKEELEGIRVKGKGCPKPIKSWAQCGVTKKELEVLKRLGYEKPTPIQCQAIPAI
MSGRDLIGIAKTGSGKTLAFLLPMFRHILDQSPLVDGDGPIALIMTPTRELCMQIGRDSK
RFTKSLGLSHVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYV
VLDEADRMFDMGFEPQVMRIMENVRPDRQTVLFSATFPRQMEALARRILTRPVEVQVGGR
SVVCKDVEQHVVVLEEDQKFYKLLEVLGHYQDKGSAIVFVDKQENADTLLKDLMKASYSC
MSLHGGIDQCDRDSTIMDFKAGRTKLLVATSVAARGLDVKQLVLVLNYDCPNHYEDYVHR
CGRTGRAGNKGYAYTFITPEQERYAGDILRAHELAAVAVPEPLRQLWEGYKARQAADGKK
VHTGGGFSGKGFKFDESEAALANEKKKFQKAALGLQDSDDEDIENDIDQQIESMLAPKRT
VREIARPSAANLSVPGQPVPSATDKLELARRLASKINIAKNLGAEAKGATQQAAEAILKG
AGPTNLITAKTVAEQLAAKLNTKLNYQPREEDLVEGEGEPGEQTFRKYEEELEINDFPQQ
ARWRVTSKEALAQISEYSEAGLTVRGTYITPGKPPPEGERKLYLAIESTSELAVSKAKAE
VSRLIKEELIKLQSSGTHTGSRGRYKVL
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atggttcgaggtggtgaaaaagaacggcattaccggagaaggtctagatctcgctctgct
acacctgaaaagaaacgacgaagatctaggagccgtgaaagagacagagagaagactcga
cacaaggaacggcgcagccgatccagggagagagaacgtgaaagaagcgaccgaagagag
cgttctgaaagggagagggatcgtgatagaaaacgaaccccttgccaaacatcggagagc
gataacattgcacatctgcgacatgaagcaaaatttagtggagacagtaaagaaaagcgt
cttacaggctcaaaatcctcacgctccggtaaagatcgatcaaacagatcaagatcacgt
gatcgcaaggacaaagataaaggtgataatgaagatttacctttcgaccacaccaaattg
gacaaggaagaagagcaaaaaaggttggagctagaaatgcaaaaacgaagagaaagaata
gagcgatggcgagcagagagaaaaaagaaggaaattgaagcaactaagaaagacggcaaa
gcttctatcttagcaaaccttcaacttcctatgaaaaaatggtcattggaagatgatagt
gatgaagaaacccctgtcatcctgaatgtcactaaagaaatcaaagaggaaggagatatc
aaagaagaaccggaagttgtaccagaagaaatcaaagtagaagaagaggaagttgatcct
cttgatgcttttatggctgaagtccaagaagaagttagaaaagtcaataaactagatcct
aacaggtcaaaatcaaccaataatggaacaggtactggaaactcacagagtggtggtgtg
gtaatagtaactggtgtagctaaacgacaagttgctaaacaaaaaggagaattgatcgaa
caaaatcaggatggattggaatattccagtgaagaggaaggtgaaaaccttcatgaaact
gccgcgggtattgccaacaaacaaaaacgagaactagccaaagttgatcatgctgcaacc
gaataccagccatttagaaagtcattttatgttgaggttcctgaaatcgctagaatgaca
cctgaagaggtggatatctacaaagaggaactcgagggcattcgagtgaagggcaaggga
tgtccaaaaccaattaaatcttgggctcaatgcggggtcacgaaaaaagagttagaagtt
ttgaaaagacttggctatgaaaaaccgacacccatacagtgtcaagctattccagcaatc
atgtctggccgtgatttaatcgggatcgcaaagactggaagtggaaagacgctagcattt
ttgctgcccatgttcagacatatattggatcaatctccattggttgacggcgatggccct
attgcgttgattatgacaccgactagggaactgtgtatgcaaattggtcgtgattcgaag
agattcactaaatctttgggtttatctcatgtttgtgtgtatggtggtacgggtatttct
gaacaaatagcagaattgaaaagaggtgcagaaatcattgtgtgcacacctggcagaatg
attgatatgttagctgccaacagcggtcgtgtcactaatttaagaagagttacttatgtc
gttttggacgaggccgataggatgtttgacatgggctttgagccacaggtgatgaggata
atggagaatgtcaggcctgatcgacaaactgtcttattcagcgctacatttccacgtcaa
atggaggctttggccaggcgaatacttactcgtccagtagaagttcaagttggtggacgt
tctgttgtttgtaaagacgtagaacagcatgtcgtggttcttgaagaagatcaaaaattc
tacaaactgcttgaggtactcggacactatcaggataaaggatctgctatagtgtttgta
gataagcaagaaaatgctgacacactattaaaggatttaatgaaagcttcgtactcatgt
atgtcgctgcatggaggcattgatcagtgtgatcgagattcgacaattatggatttcaaa
gccggtagaacaaaattattagtagcgacttctgttgcggccagaggattggatgttaaa
caactcgttctggtattgaactacgattgtccaaatcattatgaagattatgttcataga
tgcggtaggactggacgtgctggtaacaaaggatacgcgtatacctttattacacccgag
caagaacgatatgctggtgatattctgcgtgctcatgaattagcagctgtagcagttcca
gaacccttgcgtcaactgtgggagggatacaaagcccggcaggcagctgatggcaagaaa
gttcacaccggtggagggtttagcggaaagggcttcaaatttgatgaatcagaagctgca
ttagcaaacgagaaaaagaaattccaaaaagccgctttaggattgcaggattctgatgat
gaggatatcgaaaatgacattgatcagcagatcgaaagtatgttagccccaaaacgaacg
gtgcgtgagatcgccagaccatccgctgccaatctttccgttcctggacaaccagtaccg
agtgctaccgacaaattagaacttgccagaagattggcttccaagatcaacattgccaaa
aatctgggtgctgaagcaaagggagcaacacaacaagccgcggaagccattctaaagggc
gcgggtcccaccaatcttatcacggcaaagactgtagctgaacagttagctgcaaaattg
aatacgaaactcaactatcagcccagagaagaagatttggttgaaggcgaaggcgaaccc
ggtgaacaaaccttccgcaaatatgaagaagaacttgaaattaacgactttcctcaacaa
gcaagatggcgggttacaagtaaagaagctctggctcaaatttcggaatattctgaggct
ggacttactgttcgaggaacttacatcacacctggcaaacctcctcctgaaggagaacgg
aagctctaccttgcaattgagtccactagcgaattagctgtcagtaaagcaaaagcggag
gtctcacgtctcatcaaagaggaactcattaaacttcaatcctcaggaacgcatacagga
tcgcgaggacgatataaagttttataa
DBGET
integrated database retrieval system
