Athalia rosae (coleseed sawfly): 105686437 Help Entry 105686437         CDS       T09776                                  Name (RefSeq) DNA ligase 1 isoform X3   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism aroa  Athalia rosae (coleseed sawfly) Pathway aroa03030   DNA replication aroa03410   Base excision repair aroa03420   Nucleotide excision repair aroa03430   Mismatch repair Brite KEGG Orthology (KO) [BR:aroa00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     105686437    03410 Base excision repair     105686437    03420 Nucleotide excision repair     105686437    03430 Mismatch repair     105686437  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:aroa03032]     105686437    03400 DNA repair and recombination proteins [BR:aroa03400]     105686437 Enzymes [BR:aroa01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      105686437     6.5.1.6  DNA ligase (ATP or NAD+)      105686437     6.5.1.7  DNA ligase (ATP, ADP or GTP)      105686437 DNA replication proteins [BR:aroa03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     105686437  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      105686437 DNA repair and recombination proteins [BR:aroa03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      105686437    NER (nucleotide excision repair)     Other NER factors      105686437    MMR (mismatch excision repair)     Other MMR factors      105686437 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C mRNA_cap_enzyme Motif Other DBs NCBI-GeneID:  105686437 NCBI-ProteinID:  XP_012256692 LinkDB All DBs Position 3:complement(3432572..3437654) Genome browser AA seq 920 aa AA seqDB search MAQKSITSFFTKLVPKTDKNEEQPQPSTSRKKDEEATPSNGKRKRNQSACSNGSITSPPV KKTGTNNGVASSSPSQISSKCATKIAKQLDQNKKKISPTPKKIGRKDRAVDPLDAANSEK EKENTPTVKEEGIQKASPKSRTTEQNDDISKSKKASKKRSRIIVDDSSDDDIHLKLPDSP VKQDKKASVASPVKKERYTEDEKAVSADQDSAEELDKSSKTENLNSPPMTKKSPKNIHSF FTSKQKTDPKGEVNKSSSGKGKTSAHPYDPSLPKYHPIDDACWKRNEKVPYIALARTLEV IENTSARLKMIEILSNYLRSVIVLSPEDLLASVYLCLNQLSPAYEGIELGIAETTLMRAI AQCTGRTIAQIKSDAQKVGDLGIVAEESRSNQRMMFQPGPLTVANVFIKLKEIAQMTGQA SMGKKVDKIQSLFVACRFSEARYFIRSLAGKLRIGLAEQSVLQAIALACTMTPPDQDYPP KILNYSEKISADKFKRDYDEKALILKTTYCECPNYDLIIPVLLKDGLEALPVKCKLSPGI PLKPMLAHPTKGVQEVLTRFDGLKFTCEWKYDGERAQIHIAENNDVSIYSRNQENNTSKY PDVIGRLVNTRSDNVKSCVLDCEAVAWDRNERRILPFQVLSTRKRKDANEADIKVQVCIF MFDLLYLNGEALVKEPFIKRRQLLKENFKEVEGEWQFATSLDTSTMEEVQVFLEESVKGN CEGLMVKTLEQDATYEIAKRSRNWLKLKKDYLEGAGDTLDVVVIGGYIGRGKRTGTYGGF LLACYDQDNEEYQSICKIGTGFSDEALQQHTEYLKQHIIPEPKAYYRHDGSQEPDHWFDA TQVWEIKCADLSLSPVYRAASGIVDPEKGISLRFPRFIRIREDKNCEDATSAQQVAEMYN NQEHIKNQTSKNKVTEEDFY NT seq 2763 nt NT seq  +upstreamnt  +downstreamnt atggcgcaaaagtctataacgtcatttttcaccaaacttgttccaaagactgataagaat gaggaacaaccccagccaagtacatcgagaaagaaggatgaagaagcgactccgtccaat ggaaagagaaaacgaaatcaaagtgcctgcagcaatggatctatcacatctccacctgta aagaagactggcacaaataatggcgttgcatcttcatctccctcgcaaatctcatctaaa tgtgctacaaaaattgcaaaacaactagatcaaaataaaaaaaaaatctcacctactcca aaaaagataggtagaaaagatcgtgcggttgatccacttgacgcagcaaattctgaaaaa gaaaaggaaaacacacccacagtaaaagaagaaggcattcagaaggcttccccaaaaagt agaaccactgaacaaaatgatgatatttctaaaagcaaaaaagcctctaaaaaaagatcc agaataatcgtcgacgattctagcgatgacgacattcatttaaaactcccagatagtcca gtaaagcaggataaaaaagcatctgtggctagtcctgttaaaaaagagaggtataccgaa gatgagaaagctgtttcagccgaccaagattctgcggaagaattagataagagttctaaa acagaaaacctaaatagtccgccaatgactaaaaagtctcctaaaaatattcatagcttt tttacctccaagcaaaagacagatccaaaaggagaagttaacaaatctagcagtggcaag ggtaaaacatcggctcacccttacgatccaagccttccgaagtaccatccaatagacgat gcttgttggaagcggaacgaaaaagtgccgtacattgcattagctcgtaccctagaagtg attgaaaacaccagtgccaggttaaagatgattgagattctttcaaattaccttcgatct gtcattgttctaagccccgaagacttacttgcaagtgtttatctctgcctcaaccaatta agcccagcgtatgaaggtattgagttgggaatagctgaaaccacgttaatgagggcgatt gcacagtgcaccggaaggacaattgcacagataaaatcagatgcacagaaagttggagat ttaggaatcgttgctgaagaaagtcgttcgaatcaacgaatgatgttccaaccaggacct ttgactgttgcaaacgtattcattaaactgaaagaaattgcgcagatgactggacaggct tccatgggcaagaaggtggataaaattcaatctcttttcgttgcttgtcgattttctgaa gcacgttacttcatacgttctttggctggaaagcttaggataggtctggccgagcaatca gttttacaggcgattgctttggcttgcactatgactccgcctgatcaagattaccctcca aaaattttaaattatagtgagaaaatatccgctgataagttcaaacgagactatgatgag aaggccttgattctcaaaactacgtattgcgagtgtccaaattatgatttgatcattccc gttctattgaaagatgggctagaagctttgcctgttaaatgtaagctttctcctggtatt ccactaaaacccatgctggcgcacccgacaaaaggtgttcaggaagtcctgacacgattt gacggattgaaatttacttgcgagtggaagtatgacggagaaagggcacagatacatata gctgaaaataacgacgtatcgatatacagtaggaatcaagaaaacaacacgagcaaatat ccagatgtcatcggaaggctggtcaatacacgttccgataatgttaaaagctgtgtcttg gactgtgaagctgttgcttgggatcgaaatgaaaggcgaattcttccgttccaagtactg agtaccagaaaacgaaaggatgcaaacgaagctgacatcaaagttcaagtatgtatattc atgtttgacctactctatttgaacggagaggcattggtgaaagaaccattcataaaacgg aggcaactgttgaaagaaaattttaaagaagttgaaggagaatggcaattcgctacaagt ttagatacatccacaatggaagaggtccaagtctttctggaggagtccgttaaaggaaac tgtgagggtttaatggtaaaaactttggagcaagatgcaacgtatgagattgcaaaacga tctcgaaactggttgaaattgaaaaaggattatctggaaggagctggtgataccctggat gtagtggtcatcggtggctatattggaagaggcaaaagaactggaacttatgggggattt ttactggcttgttatgaccaagataatgaagagtatcagagtatttgcaagattggcact ggcttcagtgatgaagctctgcaacagcacacagaatatttaaagcaacacattatccct gaacctaaagcatattaccgacacgatggaagtcaagaacctgatcactggtttgacgct acccaagtttgggaaattaaatgtgccgatctctccctgtcgcctgtgtacagagcagcc tccggcattgttgatccggaaaaaggtatatctttacgctttccacgatttattagaata cgtgaagacaaaaattgcgaagatgcaacttctgctcaacaagttgcagaaatgtacaac aatcaagaacacataaaaaatcaaactagtaaaaataaggttacggaagaagacttttat tag

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