Athalia rosae (coleseed sawfly): 105686486
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Entry
105686486 CDS
T09776
Name
(RefSeq) putative elongator complex protein 1
KO
K11373
elongator complex protein 1
Organism
aroa
Athalia rosae (coleseed sawfly)
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aroa03016
]
105686486
Transfer RNA biogenesis [BR:
aroa03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
105686486
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
Beta-prop_WDR19_1st
TPR_GEMI5
RNase_T
Motif
Other DBs
NCBI-GeneID:
105686486
NCBI-ProteinID:
XP_012256785
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Position
8:complement(5991360..5996854)
Genome browser
AA seq
1346 aa
AA seq
DB search
MKNLRVLEHRYLDLLSAKDNPSSSSLILSEADSLCCLSNDSGNFYVYKEGKVHCLTSPGL
SFHLGNENAVNSKIIGFEYCDITCKIYIAYACGQLYTLEPDIPDSIAEFEAQFSEGLQVM
TFSPDLEIVTLVTANETVILMTSSCHILTEVNLNSRDFGEKQFVTVGWGRKETQFHGSEG
KSAAKAKPSSIEKSESDDGLPRISWRGDGTLFAVSFLSKETNIRQFKVFDRKGVLQFTSE
PCTGLEQNLAWKPSGNLIATTQRFPNKHVVSLFEKNGLKHREFTLPFEPKEILVKDLQWS
SDSDVLAIWCITINDDTNFVQLWSENNYHWYLKQTILFSTDNPPLYLAWTADPKLGKTLV
ILTKVNYLTYTFYWTINHSSGRTEDDKALVGVIDGDRALLTGFRVGVVPPPMAHQALQID
QPINEVVFGPETKDKDSWINTNVLFAVLHNNQLAFYKQVPNFVEYGHIKSYEIEWEVSNP
ISSSAPNFMHHFLWYKEDSILCAATLGTNSLLCVIQMDGISPAKNGRLIVRDTYRMNGTI
QHIVGSPNPDVVYIMMDRVVYTYSKEKGVNQTEISVNATCHQMNVIEIEKKHVVLCLSDR
YCLYVNGKEIANNITSLFVHSEFLLLTTLQHTLVSITLDGSGFEKLLTQDLTVKPWEGAD
NEKFISGLSIRRLERGSKLITAVSKDTRTILQMPRGNLECIQPRALSLYVIGRYLNELNY
YSAFDLMRKQRINLNLLVDHDPNLFISNADKFIDDIKNPNWLSLFLSDLREEDVTTTMYS
SCYRQKTQDGKSSNQIPGSGDNSQNSSSKSVSVIPEKGKIENICELLRNHMEGRPDTDRL
LLPILTSLVKKQEIKDLEAALVKVKTIRNLENENENEKQFRSSSEEALKYLLYLVDVNTL
FDIALGMYDFELVMIVAAKSQKDPKEYVPFLNNLRQMDENYMRYSIDVHLKRFEKALNHI
SKCNERFNECITFVKTQKLFSQALKLFPINSKEYKDISEIYGEYLIDARKFQEAAIMFTR
SNCLAKALNTFTLAGDWREAIVVAKQMKSSVAELHNLCEVLVAKLKEGRRYAEAAIILTQ
ELCNFEDGIATLCEGKLWQDALRVAYQVDRLDIIETHIKPGVSEHADYLISKINENRQDF
TKHKQRLKIVREEKLLRESQSLYNTEGDYDPSAARGESDLFSDTTSIAGSITSRGSQSSR
TSGRSYRSSKNRRKHERKLHSLREGSIYEDMALIAALHGIVTSAYAYRAEVNILAKMLLR
FYNDTRAEKLQNLLDEFLNEIERGKADIWIDNPSNNTSNLISGKYNEVSQSVQEGSTPEV
SLAPHLRYPPTANPIIWKLEMLSLQT
NT seq
4041 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatttacgtgtgttagagcatcgttacttggacctgctaagtgctaaggataat
cctagttcttcgtcactaattttatccgaagcggatagtctttgctgcctatctaatgac
agcggtaatttttacgtctataaggaaggcaaagttcattgcttaacttcaccaggatta
tcgtttcacctgggcaacgaaaatgcggtgaattcaaaaattatcggattcgaatattgt
gatatcacatgcaaaatctacattgcttatgcttgtggacagttgtatactctcgagccc
gacatacctgattcgatagcagagttcgaagcacaattcagtgagggattgcaggtgatg
actttcagcccagatctcgaaatcgttactctagttactgctaatgaaactgtcatactg
atgacatcgagctgccacatacttaccgaggtaaatttgaattccagagattttggtgaa
aaacaattcgtaactgtcggttggggtagaaaggaaactcaatttcatggctctgaaggt
aaatcggcggcaaaagcaaagccctcgtcaatcgaaaagtctgaatcagatgacggtcta
cctcgaatctcatggaggggtgatggcactttgtttgcggtcagtttcctctcaaaagaa
acaaatatacgtcaatttaaagtgttcgatagaaaaggagttcttcaattcactagcgag
ccatgtacgggcctggaacaaaatttggcctggaaaccttctggcaatttaatagcaacg
acgcagagatttccaaataaacacgtagtttcactgtttgaaaaaaatggattgaagcac
cgcgaattcactttgccatttgaaccaaaggagattttggttaaagacttacaatggtct
agtgattcggatgtactagcaatttggtgtatcaccataaatgatgatactaatttcgtt
cagttatggagcgagaataattaccactggtatttgaagcagacgatattattttccacc
gataacccgcccctgtacctcgcttggaccgccgaccctaaacttgggaagacattggtg
attttgacaaaagtaaattatttgacctacacattctattggaccatcaatcacagcagt
ggcagaacagaagacgataaagcccttgtcggagtgatcgacggagatcgagcacttttg
accggcttcagggtcggcgttgtccctccaccaatggctcaccaagcccttcaaattgac
cagccgataaatgaggtggtttttggaccagaaaccaaagataaagatagctggataaat
accaacgtcctattcgccgttctccacaataatcaattagcgttttacaaacaggtacca
aactttgtcgaatacgggcacataaaatcatatgagatcgagtgggaagtctcgaacccg
atatcgtcgtcggccccaaattttatgcatcactttttgtggtataaagaggactcgata
ctgtgcgccgcaactttggggacgaattctctattgtgcgttattcaaatggacggtatt
agcccggcgaaaaacggccgacttatcgtgcgggatacctatcgaatgaatgggactatt
cagcatatcgtcggcagtccgaatccggatgtcgtttacattatgatggacagggttgtt
tacacgtacagcaaagagaaaggagtgaatcagacggaaatatctgtcaacgcgacgtgc
catcagatgaacgtgatagaaattgaaaagaagcatgtagttttgtgcctgagcgatagg
tactgtctctacgtcaatggcaaagaaattgccaacaacattaccagcctctttgtccat
tcagaattcttattattaaccacgttacaacatactttggtaagcattactttggatggc
agtggattcgaaaaactcctgacacaggatttgactgtaaaaccatgggagggtgcggat
aatgaaaaatttatatcaggcttgagcataaggcgattagaaagaggttcgaagctcata
actgcggtttctaaagacactagaactatcttacaaatgccccgtggaaatttggagtgt
attcaaccgagagcattgtcgctctatgtcattggcagatacttgaacgaattgaattac
tactccgcttttgatttgatgagaaaacagaggatcaatttgaacctattggtcgatcat
gacccaaatttgttcatctcaaatgctgataagtttatcgatgatatcaaaaatccaaat
tggttgagtctgtttctatctgatctccgagaagaggatgttactactacgatgtactcc
agttgctatcgccagaaaacacaagacggtaagtcttcgaatcagatacctggctctggc
gataactctcaaaactcaagcagcaaatctgtatcggtaataccagagaaaggcaaaatc
gaaaatatttgtgaactcttgaggaatcacatggaaggaaggcccgatacagacagatta
cttttgcctatcctcaccagtctggtgaaaaaacaagaaatcaaagacctggaagcagct
ttggtcaaagtaaaaacgatcagaaatctggaaaatgaaaatgaaaatgaaaaacagttc
cgtagctcgtctgaagaagctttaaaatatcttttgtatttagtcgatgttaataccttg
ttcgacatcgcactcggaatgtatgatttcgaattggtgatgatcgtcgccgcaaagtcg
caaaaggatcctaaagaatacgttccatttttgaataatttgaggcaaatggacgagaat
tacatgcgctattccatcgacgtgcacctcaaacgcttcgagaaggccttaaatcacatt
tcaaagtgtaacgaaagatttaatgagtgtatcactttcgttaaaacacaaaagctattt
tcacaagctctaaaactgttccctataaacagtaaggagtataaagacatttctgagatc
tacggcgaatatcttatcgatgccagaaagtttcaagaagcagctattatgtttacccga
agcaactgtctcgccaaagctctcaacacctttacgctagctggagattggcgcgaagct
atcgttgttgctaaacaaatgaaatcgagtgttgcagagttacataatttgtgcgaggtt
cttgttgcaaaactgaaagaaggcagaagatacgcagaagctgcaatcatattgacgcag
gaattgtgcaactttgaagatggcatagccactctctgtgaaggtaaattatggcaggat
gcgctgagggttgcttaccaggtagaccgtcttgatattatcgaaacgcacataaagccc
ggtgtttcggaacatgcggattacttgatttcaaaaatcaatgaaaatcgacaagatttt
actaagcataaacaacgactgaagatcgttagagaagaaaagttacttagagaatcccaa
tctctgtacaataccgaaggtgattacgatcccagtgctgcgagaggagagtcggatttg
ttcagtgacacgactagtatcgccggttcaattacaagtcgtggatcgcaatcttccaga
acctcggggcggagttaccgatccagtaaaaatcgtaggaaacatgaaagaaaactccac
agtttgcgcgaaggtagtatttacgaagacatggctttgatagctgcattgcatggaatc
gtgacgagtgcatatgcgtacagagccgaggtaaatatcctggcaaaaatgttgctacgt
ttctacaacgacactcgcgcagagaagttgcaaaatttgctcgatgagtttttgaatgaa
attgaaagaggcaaagcagatatttggatcgataacccgagcaacaatacctccaattta
atttctgggaaatataacgaagtttctcaatccgttcaagaaggttctacgccggaagtg
tcacttgcaccccatcttaggtatcctcccacagcgaatccaatcatttggaaactggag
atgttatctctgcagacctga
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