Athalia rosae (coleseed sawfly): 105686513
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Entry
105686513 CDS
T09776
Name
(RefSeq) retinoblastoma-like protein 1 isoform X1
KO
K04681
retinoblastoma-like protein 1
Organism
aroa
Athalia rosae (coleseed sawfly)
Pathway
aroa04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
105686513
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aroa03000
]
105686513
Transcription factors [BR:
aroa03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
105686513
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
TFIIB
ORC6_2nd
Motif
Other DBs
NCBI-GeneID:
105686513
NCBI-ProteinID:
XP_012256844
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All DBs
Position
3:complement(3478905..3487065)
Genome browser
AA seq
1040 aa
AA seq
DB search
MGQSDDVEDSTYSRHQDLCQKLNMDATAASEAWKSYETIRQNYTLEGDQLHWIGCALYVA
CRKSSTPTVGRTGANVEGNCVSLTRLLRLCNLSLIQFFNKSKNWADMANMPQDFRSKIDK
LERNFAVSMLIFKKYQPIFTDIFANPADDIAKPLRSRRQRALPCTPSRVFEFCWTLFVCI
KGAFPDISDDLVNLNHLLLACCDLIYSNALLANRRDLLNPNFPGLPENYDDPVYTPPETA
NCIISLLCKTREGIPVEAKVIKEYYLKNHINKLFREKVLRGDQSNFSGILEPLNFDGNSK
AVNKAYEQHVLSVGDFDERMFLAEWRRVRLNGISAIEMLGGDITCRVKIPRHYTSKDADA
SDNIGSPAISIGGDIHEQFTLRREQYGGQMQHLAPPTPLTGRKYLRSKDVANPTPLSTAT
QSVSRLQALLAGCKPMPSDTLKETLNTCTQDVKASIEARVNEIGEQFCRNYSQTTEDNDT
VNADFGRKRLQLAQTLFYKLLETILGDEQRKKPNCDIRNLLSQEIFHQCLFACCLEIVIY
SYKSHRSFPWILNALNLEPYYFYKVIEIIVRSEDQLSRDIVKHLNYIEEKILETLAWKSE
SPLWEAIRKTEGGVPSCEEVSLHSDVVDPNTPGQPVLRRIALDRGNHHDVQQSPISSASE
RFQSPVAATGLAKKRLFSDGRIGGQQSVLRIGSGQSVLQTKLSSIDGDQKLLLTPSPVTV
LKTTCPVGTTTPLPQVPVNKEPAKPRRGGSVALFFRKFYHLAFVRMNHLCTKLELIDTDL
KQKIWTMFEYSVKDQTELMKDRHLDQILMCAVYVICKIAKIEKNSFTEIMRCYRLQPQAE
SHIYRSVLITKTSQNDTNNRELDISDDNTTQDDGTAPPTPSCMAGTSQNFGPETRGDLIK
FYNTVYVPQVKEFANKFPSRGESMNLTLSPLPKSKPTAKSPVRRVTNSVMTRTLDSKAMT
ASPAPQLSYCFSRSPAKDLEAINRMMISVDARKSVGKRLLTDLTDVDMTSAEQSPAKKIT
TPLVAKKLENIMGERRTQNQ
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atggggcaatcagacgatgttgaggattctacgtacagtaggcaccaggatttgtgccaa
aagttgaatatggacgcaacagcggcttccgaagcttggaaatcatacgagactattcga
cagaattatactcttgagggtgatcagttgcactggataggatgtgctctgtatgtagca
tgtcgaaagtcatcgacgccgactgttgggcgaacaggagcaaatgtcgaaggcaactgc
gtatcgctaactcgcttacttcgtttgtgtaatctgtctctgatacaatttttcaataag
agtaagaattgggcggatatggcgaacatgccacaggattttaggtctaagattgacaaa
ctggaacgaaattttgctgtgtcgatgctgattttcaaaaagtaccagcccatctttaca
gacatatttgcaaacccagctgatgatatagctaagccattgagatccagacgacaaaga
gctctgccttgtacaccatccagggttttcgagttttgctggacgctttttgtttgcatc
aagggagcattcccagatatttcagatgacctggttaacttaaatcacttactcctggct
tgctgtgatcttatttacagtaatgctttgttggcgaatagacgagatcttttgaatcca
aattttcctggcctacccgagaattacgacgatccagtttacacaccaccagagacagca
aattgcattattagtctattgtgtaaaactcgtgaaggaatacctgtggaggctaaagtg
ataaaagaatactacttgaagaatcatataaataaattgttcagagaaaaagttttgcgc
ggtgaccaatcgaatttctcagggattctcgaacccctaaatttcgatggtaacagcaaa
gcagtcaacaaagcctacgaacaacacgtccttagcgtcggtgattttgacgaaaggatg
tttttggccgaatggaggagagtgagactgaacgggatatcggccatcgagatgcttggc
ggagatattacttgccgcgttaaaattcccagacactacacgtcgaaagacgcagatgcc
agcgacaacattggctcaccagcaatctctatcggaggggatattcatgaacagtttaca
ctgaggcgagaacaatatggtgggcaaatgcagcacttagcaccaccgacaccattaact
gggcgtaaatatcttcgatccaaagatgtggcaaacccaacgcccctatcgactgctact
cagagtgtcagtcgtttacaggcacttttggctggctgcaaaccaatgcctagcgatact
ttgaaagaaacgttgaacacttgtacacaggatgtcaaagcttcgatcgaagccagggtc
aatgaaattggagaacaattctgcaggaattattctcaaaccactgaagacaacgatact
gtaaatgcagattttggcagaaaacgactacagttagcccagactctattctacaagctt
ttggaaaccattttaggtgatgaacaacgcaagaagcctaactgtgatattaggaattta
ttgtcgcaagaaatatttcaccaatgtttatttgcctgctgcttggaaattgtgatctat
tcgtacaagagtcacagatcattcccttggatattgaatgcgctgaatttggaaccttat
tacttttacaaagttattgaaatcattgtaagatcggaagaccaattgtctcgcgatata
gtcaagcatctaaattacattgaagaaaagatcttagaaaccttagcttggaaaagtgaa
agtcccttatgggaagcgatcagaaaaactgaaggaggcgtgccaagctgtgaggaagtg
tctttacactcggacgtcgtggatccaaatacaccgggacaaccggtcttgagacgcatt
gcactcgaccgaggtaatcatcacgatgttcagcagagtccgatctcctctgcttctgaa
agatttcagtcaccggtagcagcgacaggtcttgcgaagaaaagattgttctccgacggt
agaatcggtggtcagcaaagcgttctcagaataggatctggccaaagtgttttgcaaact
aaactttcttctatcgacggtgaccaaaagctgcttttgacccctagtccggtaacagtt
ttaaaaaccacatgtcctgttggcactactactcctttgccacaagtgccggtgaacaag
gaacccgcaaagccgaggagaggaggttcggtggccctatttttcagaaaattttatcac
cttgctttcgttagaatgaatcatctatgcacaaagttggagctgatcgacacagatttg
aagcaaaaaatatggaccatgtttgaatattctgtaaaagatcagacggaactgatgaag
gatagacatttggatcaaatattaatgtgcgctgtatacgtgatttgcaaaattgctaaa
atagaaaaaaattcgttcacggaaatcatgcgatgttatagattacagccacaagcagag
tctcacatatatagatctgttctaataacaaagaccagtcaaaacgatacaaataacaga
gaactggatatttctgatgataatacaacacaagacgatggcacagccccgccaactcca
tcttgcatggctggaacttctcaaaactttggtcccgagacgcgaggggacctaatcaaa
ttttacaacacggtttacgtaccgcaagtaaaagaatttgccaacaagtttccgtccagg
ggagaatccatgaatttgaccttgagtcctttaccaaagagtaaacccacagcaaagtca
ccggtcaggcgtgtcacaaatagcgttatgacgagaacattggactcaaaagctatgaca
gcttcacctgcgccgcagcttagctattgcttcagccgcagtcctgcaaaggatctagaa
gctataaacagaatgatgatatctgttgacgcaagaaaatcagttggcaaacggcttcta
acagatctcaccgatgtcgatatgacaagtgcagaacaatcccctgcaaaaaaaatcacg
actcctttagtggccaagaaactagaaaacatcatgggcgaacgccgtacgcaaaaccag
taa
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