KEGG   Athalia rosae (coleseed sawfly): 105686606
Entry
105686606         CDS       T09776                                 
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
  KO
K12828  splicing factor 3B subunit 1
Organism
aroa  Athalia rosae (coleseed sawfly)
Pathway
aroa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aroa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105686606
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aroa03041]
    105686606
   03036 Chromosome and associated proteins [BR:aroa03036]
    105686606
Spliceosome [BR:aroa03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    105686606
 Complex B
    105686606
 Complex C
   U2 SnRNP specific factors
    105686606
Chromosome and associated proteins [BR:aroa03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    105686606
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT_ECM29 HEAT_2 Htt_N-HEAT_1 XMAP215_CLASP_TOG UME CEP104-like_TOG DUF2298
Other DBs
NCBI-GeneID: 105686606
NCBI-ProteinID: XP_012257003
LinkDB
Position
8:complement(5826724..5835073)
AA seq 1316 aa
MDSIPRTHEDIEAQIREIQSKKKEIQSTLTEKEQVGLGKTGFYDQDIYDGTNNKYDGYVT
SIAANDEVEDEDYEPNSFSQSKRPGYNAPAALLNDVAQSEKDYDPFADRRRPTIADREDE
YRQKRRRMIISPERVDPFAEGGKTPDVGSRTYTEIMREQFLKGEETELRKKLVEKAKDGT
LKANGEPKPAPKKRGRWDQTDDTPAAKKAAGTAATPTSWDNADVTPAAIRWDETPGHGKG
GETPGATPGVSTRMWEATPGHATPGAVTPGRETPSHDKAASNRRNRWDETPKTERETPGH
NSGWAETPRTDRVAGDLIQETPTPSASKRRSRWDETPSNQTPGSMTPQTPATPLTTPHQS
SILTPSGVTPTGPKAMGLATPTPGHLMSMTPEQLQAYRWEREIDERNRPLSDDELDAMFP
PGYKVLQPPAAYVPIRTPARKLTATPTPIAGTPQGFFIQQEDKSAKFVDNQPKGNLPFMK
PEDAQYFDKLLVDVDEESLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGA
GPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYY
ARVEGREIISNLAKAAGLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSLLPFL
KAVCRSKKSWQARHTGIKIVQQIAILMGCAILPHLKSLVEIIEHGLVDEQQKVRTITALA
IAALAEAATPYGIESFDSVLKPLWKGIRTHRGKGLAAFLKAIGYLIPLMDAEYANYYTRE
VMLILIREFQSPDEEMKKIVLKVVKQCCGTDGVEAQYIKDEILPHFFKHFWNHRMALDRR
NYRQLVDTTVEIANKVGASEIINRVVDDLKDENEQYRKMVMETIEKIMGNLGAADVDSRL
EEQLIDGILYAFQEQTTEDVVMLNGFGTIVNTLGKRVKAYLPQICGTILWRLNNKSAKVR
QQAADLISRIAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTK
MTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFELLELLKA
HKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTV
LPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVSPLLEDALMDRDLVHRQTA
CAAIKHMALGVYGFGCEDALIHLLNHVWPNVFETSPHLVQAFMDAVDGLRVALGPIKILQ
YTLQGLFHPARKVRDVYWKIYNSLYIGGQDALVAGYPRILNDPKNQYIRYELDYLL
NT seq 3951 nt   +upstreamnt  +downstreamnt
atggattccattcctcgaacgcacgaagacatcgaggcgcaaattcgagagatccagtcc
aaaaagaaggagatacaaagtaccctcactgaaaaagagcaagtaggcttgggtaaaact
ggattttatgatcaggatatatacgacggtaccaacaacaagtacgatggctacgtcaca
tcgatcgcagccaacgacgaggttgaggatgaagattacgaaccaaactcatttagtcaa
agtaaaaggccaggctataatgctccggcagctctgctcaacgatgttgcacagagtgaa
aaagattacgacccatttgctgacaggagacggccaacgattgctgacagagaagacgag
tataggcaaaagcgacgacgcatgatcatctccccagaacgtgttgatccatttgctgaa
ggcggtaagacaccagatgttggatcgaggacttacacagagatcatgcgcgagcagttt
ctcaaaggagaggaaacggagttgaggaaaaaattggtagaaaaagccaaagacggtacc
ctgaaggccaacggggaacccaaacctgctccaaaaaaacgtggccgatgggatcaaacg
gacgacacgccagcagcaaaaaaagccgctggtacagcagccactccgacctcttgggat
aatgccgacgttacaccagcagcgatacggtgggacgagacccctggccacggcaaggga
ggcgaaacaccaggggcgactcccggagtgagcacgagaatgtgggaagccactccgggt
catgctacaccaggtgcggttacccctgggcgtgaaactccttcgcacgacaaggctgcg
tccaatcgaagaaatcgttgggacgaaactccaaaaaccgaaagagaaactcctggacat
aacagcggatgggctgaaactccaaggaccgacagagtcgccggtgacctgatacaggaa
acccctacgccgtcggccagcaaaagacgcagtcgttgggacgagacaccgtcgaatcaa
acacctggttccatgaccccgcaaacgcctgcgacgccgctcaccacacctcatcaaagt
tccatcctaacccccagcggtgtcacacccaccgggccaaaggcgatgggactagcaact
ccgacacctggtcatctgatgtcgatgactccggagcaacttcaagcttatcgttgggag
cgtgaaatcgacgagcgcaatcgaccgctctccgacgacgaactggacgccatgtttccc
cctggctacaaagtactccagccacccgcagcgtacgtcccgattcggactcctgcgaga
aagttgaccgccactccgacccccatagcgggtactccccaaggatttttcatacagcaa
gaagataagagcgccaaatttgtcgacaatcaacccaagggaaacctgcccttcatgaaa
ccggaggacgcccagtacttcgataagctcttggtggacgtcgacgaggagtccctgagc
ccggaggagcaaaaggagagaaaaataatgaaacttttactgaaaataaagaacggcact
ccgcccatgcgcaaggcggcgctgagacagatcacggataaagccagagagttcggggca
gggcctctcttcaaccaaatccttccgctcctcatgtcacccaccttggaagaccaagag
cgtcatctcctcgtcaaggtcatcgaccgtattctgtacaaactggacgacctggtcaga
ccgtacgtccacaaaatactcgtggtgatcgaaccgttgctcatcgacgaagattactac
gctcgtgtcgagggcagagagataatatcgaacctggcgaaggccgcgggattggctacg
atgatctccacgatgcgacccgacatcgacaacatcgacgagtacgtcagaaatacgacg
gccagagcgttcgctgtcgtcgcctcagccctggggatcccatctctgcttcccttcctc
aaggccgtgtgtcgcagcaagaaatcgtggcaggcgcggcacaccggtatcaaaatcgtt
cagcaaatcgccattctgatgggatgcgccatactgcctcacttaaaaagtctcgttgaa
atcatcgaacacggtctggtcgatgagcaacagaaagtcagaacgatcaccgctctggcc
atagcagccctggccgaagcagctacgccctacggtatcgagagctttgactccgtgctg
aaacctctttggaagggtattcgtacccacagaggcaaggggttggcggcctttctgaaa
gctatcggttacctcatccctctcatggacgccgagtacgcgaattactacactcgtgaa
gtgatgttgatcctgatcagagagttccagtctccggatgaagaaatgaagaaaatcgtc
ttgaaggtcgtcaaacaatgctgcggcacggacggtgtcgaagctcagtacataaaggat
gaaatcctcccgcacttcttcaaacacttttggaatcaccgtatggctttggatcgcaga
aattacagacagttggtcgacacgacggtggagattgcaaacaaagttggagcatcggag
ataataaacagagtggtagatgacctcaaggacgaaaatgagcagtacagaaagatggtt
atggaaactattgaaaagataatgggtaacttgggagctgctgacgtggactctaggtta
gaagaacaactcatcgatggcattctttacgcattccaagaacagacgacagaggacgtc
gtaatgctcaatggattcggaaccatagtcaacaccctcggtaaaagggttaaagcttat
ctcccccagatatgcggtacaattttgtggcgtctcaacaacaagtcggctaaggtacga
caacaagctgcagacctgatctcacgtatcgccgtagttatgaaaacttgtcaggaggag
aaattaatgggtcatttgggggtcgttctatacgaatacctcggtgaagagtacccagaa
gtattgggaagcattctaggtgccttaaaagccatcgtcaacgtcataggaatgaccaaa
atgacgccaccgataaaagatctgctgccacgtctgacgccaattttgaaaaacagacac
gagaaggtacaagagaactgcatcgatctggttggtagaatcgcggacaggggacctgag
tacgtttccgctcgagagtggatgcgaatttgtttcgaattgttagaattactcaaggcg
cacaaaaaagcgatcagaagagctacggtcaacactttcggatacatcgcaaaagcgatt
ggaccccacgacgtattggcaacgttattgaacaatctgaaggttcaagagcggcagaat
cgcgtctgtacgacagttgcgattgctattgtggcggagacctgcagtcccttcacggtt
ttgcccgcgctaatgaacgagtacagagtgccggaattgaatgttcagaacggtgtgtta
aaatcactctcattccttttcgagtacatcggagagatggggaaggactacatctacgcc
gtaagcccgttgctcgaggacgctctcatggacagggatttggtgcacaggcagaccgct
tgtgccgccataaagcacatggcattaggagtttatggattcggttgcgaagacgctttg
attcaccttctgaatcacgtatggccgaatgtctttgaaacatctcctcacttggttcag
gctttcatggacgccgttgatggtcttcgggtcgcgttgggcccgatcaagattctgcaa
tacacgttacaaggactgtttcaccccgcgagaaaagttcgcgacgtttattggaaaata
tacaattctctttacatcgggggacaagatgctctcgtggctgggtatcctcgtattctg
aacgacccaaagaatcaatatattaggtacgaattggattatcttttgtaa

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