Athalia rosae (coleseed sawfly): 105686669
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Entry
105686669 CDS
T09776
Name
(RefSeq) protein HBS1
KO
K14416
elongation factor 1 alpha-like protein
Organism
aroa
Athalia rosae (coleseed sawfly)
Pathway
aroa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105686669
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aroa03019
]
105686669
Messenger RNA biogenesis [BR:
aroa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
105686669
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
Dynamin_N
Zfx_Zfy_act
SpoIVA_ATPase
Motif
Other DBs
NCBI-GeneID:
105686669
NCBI-ProteinID:
XP_012257133
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Position
8:complement(5892125..5896571)
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AA seq
691 aa
AA seq
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MSRHRNVRSMNYSDEYDGYDDVYGHSVEDDYCVSPGAEQFLFDRNKQHNISSYITEDDIA
EEDELQEETLPPSSYKRPELSILDAKKLESCIEVIKNVVGDSIPESILTEKILQHNFNSE
AALEAVLAATSTISPSDKRVPTKNGDDLPQGKKLAAKPTVPAVFSPTVKVVPAATRSVVK
GFDISGADGDLLHAKGEGSRSQSPSLGPTSPDVRRRDSKPVSSKSNTPRCQSPALERPTL
EQEMKLKPNEKKLDALGVFKNVRGGSKQQLHLVVVGHVDAGKSTLLGRLLCDLGQVPSKL
MHKFQTESKKIGKQSFAYAWVLDETGEERERGITMDVGHSKFETATKSVTLLDAPGHRDF
IPNMISGATQADVALLVVDAARGEFESGFESGGQTREHALLLRSLGISQLAVVVNKLDTV
EWSKERFDEIVDKLSVFLKQAGFREAVTFVPCSGLSGENLVTHAKEQGLSKWYKGPSLVE
VIDQFKCPERPVDQPFRFSVDDIYKGTGTGFCVSGHVETGMVSVGEKVLVLPHNEVASVK
GMQIDEMPVTNAFAGDQLVVTLMGIDQQIIGVGDILCDLQHPVPTTTRFQAHVVIFAVQT
PITRGLPVVMHQQSLVEPAVIKKLVAQLHKSTGEVIKRKPRCLPKNSSAVVEIETQRPVC
MELYKDVKQLGRVMLRVGGTTLAAGLVTKIF
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgacacaggaacgttcgttccatgaattattctgatgaatacgacggatacgac
gatgtttatggacactccgttgaagatgattactgcgtctctccaggtgctgaacagttt
ctcttcgaccgcaacaagcagcataacatttcatcctacattacggaagatgacatagca
gaggaggatgagctacaggaggagacgttgccaccctcgagctataagagaccggaactt
tccatcctcgatgctaaaaaattggagtcttgcatcgaagttattaaaaacgtagtggga
gattccatacctgagtcaatactcacagagaaaattctccagcataattttaactcagaa
gcagccctcgaagctgttcttgcagctacctcaacgatttctccatctgacaagcgagtg
cccaccaaaaacggagacgacctccctcaaggcaagaaactagcggccaaaccaacagta
cctgcggtattctctcctacggtgaaagtagtaccagctgcgacacggtcggttgtgaaa
ggttttgacatcagcggagcagatggagatcttctccatgccaaaggggaaggttccagg
tcgcagagtccgtcgttgggtccaacctctcccgatgtcaggagaagagattcaaagcca
gtctcgtccaaatcgaacacgccaagatgtcagtctccggcgttggaacgaccgacactg
gaacaagagatgaaactgaaaccgaacgaaaaaaaactggatgcacttggtgtgttcaaa
aacgtccgagggggctcgaagcagcaactgcatttggtggtcgtgggacacgtagatgcc
ggaaagagcactttgctgggcagactcctctgcgacctgggacaggtgccttcgaaactg
atgcataaattccaaacggagagcaagaaaattggaaagcagtcgttcgcgtacgcgtgg
gtgctcgacgaaactggagaagaaagggaacgcggcatcacgatggacgtcggtcactcc
aaattcgaaacggccaccaagtccgtcacacttctagacgccccgggtcacagggacttc
ataccgaacatgatctcaggcgcgactcaggctgacgtagcattgctcgtcgtcgatgcg
gcacgtggagagtttgaatctggcttcgaaagcggtggacagaccagagagcacgctctg
ctcttgcgttcacttggtatatcccagttggctgtggtcgtcaataaactggacaccgtc
gagtggtcgaaggaaaggttcgacgaaatagtggacaagttgagtgtcttcctgaagcaa
gctggtttcagagaagcggtaacattcgttccgtgcagcggtttgtcgggagagaattta
gtcacccacgccaaggaacaaggtctttccaaatggtacaagggaccaagcctggtcgag
gtcatcgatcaattcaaatgtccagaacggcccgtcgaccagcccttcagattttctgtc
gatgacatttacaagggtaccggcactggattttgtgtctccggccacgttgagacaggg
atggtatccgttggcgagaaggtgctcgtcctgcctcataacgaagtggcatcggtgaaa
ggcatgcagatcgatgaaatgcctgtgacaaatgcgttcgccggtgatcagctagttgtc
acgctgatgggtatagaccagcagatcatcggggttggagacatcttgtgcgatctccag
cacccggtgccaacgacgaccagattccaggcacacgtggtaatatttgccgtccaaacg
cccattactcgagggttgcctgtcgtcatgcatcagcagtctctggtagagccagctgtg
ataaaaaagttggtcgcacagctccacaaaagcaccggagaagtgataaaaaggaaacca
cgatgcctgcctaaaaattctagcgctgtcgtagagatagaaactcagcgccccgtctgc
atggaactgtataaagatgttaaacaacttggcagagttatgctgcgtgtgggaggcact
actctagcagctggtttagtcactaagatattctga
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