Athalia rosae (coleseed sawfly): 105686838
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Entry
105686838 CDS
T09776
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
aroa
Athalia rosae (coleseed sawfly)
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aroa04131
]
105686838
Membrane trafficking [BR:
aroa04131
]
Protein recycling
Others
EARP complex
105686838
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syndetin_C
Vps54_N
DUF1798
DUF1381
Motif
Other DBs
NCBI-GeneID:
105686838
NCBI-ProteinID:
XP_012257416
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All DBs
Position
6:78606..83175
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AA seq
949 aa
AA seq
DB search
MDERNKVAILMKKHVIMEDIKLKFLGFIQYKQNQTKIPSMGLHPDLLNPNESQSCPDITS
EASHSIESELLPDQDILESIEPVYYRTDECFDCCRHELQKLPEVLSSKVIERDYKRLKQE
HQVVSKKVLQLILQKQSSCKKEFERILYIQEELQNALEICKIGRADLSLAKKQFTTASLG
ILANYQKKQVVQGLLNSLNTIKTLQRTEDRLQELLSEGNYPRAISLLLECQSAAERYKHF
HCVAALNGKLQDTLDQAEEILDQTLAKMCSDFDIGTYTSVQGAYGLLGKTQMAMDQLHMH
FTAAIHNIAFTAVHAFVGGAMKKQYKQLCQSVSHEFFLPCLVELCKSLWSILSSYCQVVN
WHNTHESWSLQSGQKNLEATFNKQYIKQKLENGLARMWHDVEIKISTYLMGANLAFFKFE
QFVQILGIVHRLIEVGEELCASQSKNLQESIKKQCSSYFAHYHASRLDELKIFLENDGWE
LCPVKTSFVVTQLQEFKSLKTVLNSCKPRCGPDESNLSQDGSSAIGGLVQRYLENGMTPF
DVILDETADEDILANIGDAPSGYFSEDSDDDIPEELKCEFVDEHDQTKLGKKKHRTKFTG
PMVTNTTLSVLRVCGKYLQMSRLFRSIAVTVIQNMMQFYELCLYTVHNFFTSDLEINSES
LYTPKLKLTLARIRTTLISDDLNFTENESQSHRVTQPNLSSIVNLTQPEKVHGLTKRVIA
VESLIFLGQQYEILRPYLEHLVASPCHAFLHQFYSQTIASAIDLRKPVYMAAASQAFDVG
SILGLMGKVNWEVKDVMSQHSSYIDNLLRDIQILSMRLDEIGNRIPLPTIVYNSVWENVS
HLITHTLVEGFSNAKKCSNGGRALMQLDFTQLMSKFEKMTSLRPMPHREYVEAYVKAYYL
PENILEDWIKQHKEYSSKHLIGLISCGCQNNKKTRQRLIATIEEERLNR
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaagaaataaagtggcaattttgatgaagaaacacgtcatcatggaggacata
aagttgaagttcttaggatttattcagtataagcagaatcagactaaaattccatcgatg
ggactgcatccagatctgcttaatccaaacgaatctcaaagctgtcctgatataacatcg
gaagctagtcattccatagaaagcgagctgttacctgatcaagatattctggaatctatt
gaacctgtgtattacagaacagacgaatgtttcgattgttgtcgtcacgagttacaaaaa
ttacctgaagttctaagctccaaagtgatcgaaagagattataaaaggcttaaacaagag
caccaagtagtttccaagaaggtgttgcaacttattctgcagaagcaaagttcctgcaaa
aaagaatttgagaggatcttgtatattcaagaagagctgcagaatgctctagagatctgc
aaaattggccgagccgatttgagcctggccaaaaaacaattcaccacagccagtcttggt
attttggcaaactaccagaagaaacaagtcgttcaagggcttttgaacagtttgaacacc
attaaaactttgcaacgaacagaggatcgtctccaggaattgttgagcgaaggaaattat
cctcgcgcaatatcacttcttttggaatgtcagagtgctgcagaaagatacaaacatttt
cactgcgttgcagctttaaatggaaagttgcaagataccctagaccaagctgaagagata
ttggaccaaactttagcaaaaatgtgctcagattttgatattgggacttatacatcggtg
caaggagcttatggacttttaggaaaaacacagatggcaatggaccaacttcacatgcac
ttcacagcagccattcataacattgcttttacggccgtgcatgcttttgtcggtggcgct
atgaagaagcaatataaacagctgtgtcagtctgtgtcacacgagttttttttaccatgt
ttagttgaactctgcaaatctctgtggagtatattaagctcctattgtcaagttgtcaat
tggcacaacacacatgaaagttggtctttgcaaagcggtcaaaaaaacttggaagctact
tttaataaacagtacatcaagcaaaaattggaaaacggattagctcgtatgtggcacgat
gttgaaatcaagatttcaacttatttgatgggtgccaatttggccttttttaagtttgaa
caatttgtacaaatcttaggtatcgttcacagattgatagaagttggggaagaactgtgt
gcaagccaatctaagaatctccaggaatctatcaaaaaacagtgttcctcttattttgcc
cattatcatgcatctcgattagatgaactaaagatatttttagaaaacgacggatgggaa
ttgtgtccagtaaagacttcatttgtagttacacaattacaagagtttaaaagccttaaa
acggttctgaatagttgtaagcctcgatgtggtcctgatgaatcaaacctcagccaagat
ggtagttctgcaatcggaggactcgtgcaaagatatttggaaaatggtatgacgccattc
gatgttatcttggatgagactgccgatgaagacatcctagccaatattggagatgcacct
tctggatatttttcagaagattcagacgacgatattccagaggaactgaaatgtgaattt
gtggatgaacatgatcaaacgaaattggggaaaaaaaagcaccgaaccaaattcactggg
cctatggtaacaaatacaactttgagtgtgctcagagtttgtggaaaatatctgcaaatg
tcgagattatttagatccatagctgttacagtaattcaaaatatgatgcagttttacgaa
ctgtgtctttataccgttcacaacttttttacgtctgacttggaaataaatagcgaatct
ttgtacaccccaaaattgaaattaactttggctcgaatacgaacaactctgataagtgac
gacctcaacttcaccgaaaatgagagtcaatctcacagagtaacacaaccgaatctctct
tccatcgttaacttgacacagccagaaaaagttcacggtttgactaaaagagtcatagca
gttgaatctttgatatttttgggacagcagtacgaaattttgaggccttatttggaacat
ttggtagcatctccctgccatgcatttctgcatcagttctattcacaaacaattgcatca
gctatagatctgagaaaaccagtttacatggctgctgcttctcaagcctttgatgtaggc
agcatattaggactgatgggaaaagtcaactgggaagtaaaggatgtcatgtcacaacac
agtagttacattgataatttgttacgggatattcaaattttgagtatgaggctcgacgaa
attggtaataggataccattaccaaccattgtgtataattcagtgtgggaaaatgtttca
catttgatcacacatacattagttgaaggattctcaaatgcaaagaagtgttcaaatgga
ggtagagctctgatgcagttagacttcactcaattaatgtctaagtttgaaaaaatgact
tctctgcgcccaatgccacacagagaatatgtggaggcatatgtcaaagcatattattta
ccggaaaatatcttggaagactggataaaacagcataaggaatattcatcaaaacatttg
attggcttaatatcatgtggctgccagaataacaaaaaaacacgtcagcgattaatagca
acaattgaagaggaacggctaaacagataa
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