Athalia rosae (coleseed sawfly): 105687366
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Entry
105687366 CDS
T09776
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 5
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
aroa
Athalia rosae (coleseed sawfly)
Pathway
aroa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105687366
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aroa03019
]
105687366
Messenger RNA biogenesis [BR:
aroa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
105687366
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Gene cluster
GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
105687366
NCBI-ProteinID:
XP_012258385
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All DBs
Position
5:18100494..18105857
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AA seq
228 aa
AA seq
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MAMATTQVKGSGWPRRASNSSFEGKVVPNPSVTINRTVNLYPLTNYTFGTKEPLFEKDPS
VPARFQRMRDEFDKIGMRRSVEGVLLVHEHGLPHVLLLQLGTTFFKLPGGELNAGEDEVE
GLKRLLTETLGRQDGVKQEWVIEDTIGNWWRPNFEPPQYPYVPPHITKPKEHKRLFLVQL
QEKALFAVPKNYKLVAAPLFELYDNSQGYGPIISSLPQSLCRFNFIYM
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggcaacaactcaggttaaaggcagcggttggccaagaagggcaagcaatagt
tcttttgaaggaaaagtagtgccgaatccatcagttactatcaacagaaccgtcaaccta
tatcctttgacaaactatacatttggaacgaaagagccactatttgagaaagacccgtca
gtaccagccagatttcaacgaatgagggatgagttcgacaaaatcgggatgcgtcgcagc
gtcgaaggtgttctgttagtacacgaacatggcttaccccatgtgttacttcttcagctc
ggtacaacatttttcaaattgccaggtggagagttgaacgcgggagaagacgaggtagag
ggcctaaaacggctcctcactgagacacttggccgtcaagatggagtgaaacaggaatgg
gtaatcgaggataccattggaaactggtggcgacccaacttcgaaccaccgcaatatcct
tatgtaccgccacacatcactaaacccaaagaacataagcgactattcttggtccaatta
caagaaaaagctttatttgctgtccctaagaattacaaattagtggcagcacctttgttt
gaactgtatgacaattcacaaggatacggaccaataatttcatctctgccacagtcactt
tgcagatttaatttcatctacatgtga
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