Athalia rosae (coleseed sawfly): 105687505
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Entry
105687505 CDS
T09776
Name
(RefSeq) very low-density lipoprotein receptor isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
aroa
Athalia rosae (coleseed sawfly)
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aroa04131
]
105687505
Membrane trafficking [BR:
aroa04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
105687505
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
DUF5050
Vgb_lyase
hEGF
EGF_3
PLDc_2
Motif
Other DBs
NCBI-GeneID:
105687505
NCBI-ProteinID:
XP_012258617
LinkDB
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Position
4:complement(232582..254213)
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AA seq
897 aa
AA seq
DB search
MGWSNIFGLLVALSPVIITLISIVDTVEGSSTQSETACPLRQYRCGNGNCIPVTWVCDGD
DDCEDGSDEGPEECKSTKACTDTEFRCTNGRCIPAHWHCDGEKDCPDDSDENPSVCRNKN
CTAEQFTCRGGIGECVPLTWMCDETPDCVDRSDESDCNDTCRADEFTCENKHCIQPRWVC
DHDDDCGDNSDEKDCPASTCQPGSDFACSENYCIASRWRCDGDVDCPDGSDEVGCKDRPG
RERLNHCAAHEFSCGDHVTCIHQSWVCDGDKDCSDGSDEASSRCGTITCRPDQFQCSDRT
CISGHLSCNGKTDCPDGVDEKNCSTPTVVCDPLKQFDCGNGSCIPLSSVCNNKPDCLGWE
DEPRDLCKKNECLVHNGGCSQICVDLPIGFRCECKSGYRLMDNRTCDDIDECMEPGSCSQ
FCTNEKGGFKCSCAPGYQRDPRDLTRCKASEGHASLLFARRHDIRKVALDRQEMTAIVNN
TMMATALDFVFRTGMIFWSDNNEKKIYKAPIDEGNERTVVIDRDLTTADGLAVDWIYNHI
YWTDAEKNTIELANFEGNMKKTLIKDRVQEPRAIAVNPLEGWMYWTDWGDEARIERAGMD
GSHRMIIVGTEVRWPNGLTLDLVDKKVYWVDAKLNIIGSCNYDGSGRHTVLYSPEVVRHP
FSITTFEDYIYWTDWDNEAIFKANKFTGKEVEAITSLRSIQHPMAVHVYHPYRQPDGKNQ
CQAVNGHCSHLCLPAPKINSKSPLLSCACPDGLRLLADGLMCVENVTTTVAPTTQTVTEP
FKKLVPTKIPVIDRPTNDTEGIGGGGSTEEVTDRGLVAAIVIAVVSLGLALLALVAFLCY
RHYLHRNVTSMNFDNPVYRKTTEDQFSLEKNRFPLPAAPVSEEAQEPLTSPGTNDYV
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atggggtggagcaatattttcgggcttctagtagccttgtcgcctgttattatcacgcta
atttctatcgttgataccgtcgaaggttcttcaacacaaagtgagaccgcctgtcccctg
cgacaatatcgatgcggtaatggcaactgcatcccagtcacttgggtttgcgacggcgac
gacgattgcgaggatggttcagacgaaggtccggaagagtgcaagtcgaccaaagcctgt
acggacacggaattcaggtgtacaaacggacgctgcatcccggcacattggcactgcgac
ggtgagaaggactgtcccgatgactccgatgagaatcccagcgtctgcagaaacaagaat
tgcactgctgaacagttcacgtgccgcggaggcatcggagagtgcgtaccgttgacctgg
atgtgcgatgaaactccggattgcgtcgaccgttcggacgagagtgactgcaatgacacc
tgccgcgccgacgaattcacctgtgaaaacaagcactgcattcaaccacgttgggtctgt
gaccacgatgatgattgtggggacaacagcgatgaaaaagattgtccggcatcgacgtgt
cagcctggcagcgattttgcttgctctgaaaattactgtatcgcatctcgatggcgatgc
gacggagatgtggattgtccagatggttccgacgaagttggatgtaaggatcgtccaggt
cgagaacgattgaaccactgtgctgcccatgaattttcctgtggtgatcacgttacttgc
atacatcagagttgggtctgtgatggtgataaagattgctccgacgggtcagatgaagcg
tcgagtcgatgtggcacaatcacttgtagacctgatcagttccaatgctcagatcgaacc
tgcatctcgggccacttatcctgcaatggaaaaaccgattgtcccgatggagtggatgaa
aagaattgttcaacgccaacagttgtctgcgatcccttgaaacaatttgactgcggtaat
ggatcttgcattccactgagcagtgtttgcaataacaagcctgattgtctgggatgggaa
gatgaaccgcgcgatctttgcaagaaaaacgaatgtcttgtgcacaacggtggttgttcg
cagatttgtgttgatcttccaatcggttttcgatgcgaatgtaaaagtggataccgacta
atggataatcggacttgcgatgatatcgacgaatgcatggagccaggaagttgttcgcaa
ttttgcacaaacgaaaaaggtggatttaaatgcagttgtgctccaggatatcaaagagat
cccagagacttgactcgctgtaaagcatccgagggtcacgctagcttattatttgctagg
cgtcatgatatccgcaaagtagctctggaccgccaagagatgacagcaattgttaataat
accatgatggctacagccctggatttcgtctttcgaactggtatgattttttggagtgac
aacaatgagaagaaaatttacaaagctcctatcgacgaaggtaacgaacggaccgttgtc
attgaccgtgatttaaccacagccgatggtcttgcggtcgattggatttataatcatata
tactggacggatgctgagaaaaataccatcgaattagcaaacttcgaaggtaatatgaaa
aagactttgataaaggatcgggttcaagaacctcgtgcaattgctgttaatccactcgag
ggttggatgtattggacagactggggtgacgaggcacgaatcgagagagctggcatggat
ggctcccatcgtatgataattgttggaactgaagttcgatggccaaatggattgacgttg
gatttggtcgacaaaaaagtgtactgggtggatgcaaaattaaacataattggttcttgt
aactatgatggatctggacggcatactgtgttatactcaccggaagttgtaagacatccg
ttcagcattacgacttttgaagattatatctattggacggattgggacaatgaagctatt
ttcaaagcaaacaaattcacgggcaaagaagttgaagcgattacttctttaagatctatt
caacacccaatggctgttcatgtttatcatccataccgacaacctgatggaaaaaatcag
tgccaagcagtgaatgggcattgtagccatctctgcctaccagctccaaagatcaattca
aaatcacctctactcagctgtgcctgtccagatgggctcaggctcttagcggatggtcta
atgtgcgttgagaacgtaacgacaacagttgcaccaacgacccaaactgtcacagagcca
ttcaagaagcttgtgcctacgaaaattccagttatagacagacctactaatgacacagag
ggcattggaggaggtggttctacagaggaagtaaccgatcgtggcttagtagctgcaatt
gtgattgcagtggtatcactgggcttagcattactagctctggtagctttcttgtgctac
aggcactatctccatcgcaacgtcacaagcatgaactttgacaatcctgtatatagaaaa
accaccgaagatcaattcagtctggagaagaaccggttcccccttcctgctgcccctgtt
agcgaagaggcgcaggaaccattaacgagccctggtaccaatgactacgtttaa
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