Athalia rosae (coleseed sawfly): 105687825
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Entry
105687825 CDS
T09776
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
aroa
Athalia rosae (coleseed sawfly)
Pathway
aroa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105687825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aroa03021
]
105687825
03041 Spliceosome [BR:
aroa03041
]
105687825
03036 Chromosome and associated proteins [BR:
aroa03036
]
105687825
Transcription machinery [BR:
aroa03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
105687825
Spliceosome [BR:
aroa03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
105687825
Complex B
105687825
Complex C
U2 SnRNP specific factors
105687825
Chromosome and associated proteins [BR:
aroa03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
105687825
TFTC complex
105687825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
105687825
NCBI-ProteinID:
XP_012259154
LinkDB
All DBs
Position
2:complement(25725297..25732005)
Genome browser
AA seq
1217 aa
AA seq
DB search
MYLYNLTLQRATGITHAVHGNFSGSKMQEILVSRGKSLELLRPDPNTGKVHTLLTVEVFG
IVRSLMAFRLTGGTKDYIVVGSDSGRIVILEYIPAKNAFDKVHQETFGKSGCRRIVPGQY
LAIDPKGRAVMIGAIEKQKLVYILNRDPEARLTISSPLEAHKSNTLVYHTVGVDVGFENP
MFACLEIDYEEADSDPTGDAAVKTQQTLTLYELDLGLNHVVRKHSEPLEEHANFLVSVPG
GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIKLKYFDTVPVATSMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDEMDSLSPIMTCQVADLANEDT
PQLYMTCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKRRVDEEYDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSALGEDALVQVYPDGIRHIRADKRVNEWKAPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKMPSEVMCMALGNVATGEQ
RSWFLAVGLQDNTVRIISLDPSDCLAPRSMQALPAAAESLCIVEMGSKEADSSEDSAPQQ
SSLYLNIGLQNGVLLRTVLDPISGDLADTRTRYLGSRPVKLFRIKMQGNQAVLAMSSRSW
LSYYYQNRFHLTPLSYESLEFASGFSSEQCPEGIVAISTNTLRILALEKLGAVFNQVSFP
LEYTPRKFVIHPDSANLIVLETEHNAYTEETKQQRRLQMAEEMQEAAGAEEAAVARELAE
AFLSEEPNEAVFGAPRAGPGLWASTLRVVAPATGQTIELHRLEQNFAALCLGLVRFANQG
DQQFLIVGVAKDYQLNPRMSNGGFLYTYKVNADCTSLELMHKTIMDEVPLAICPYQGRVL
VGVGRMLRLYDMGKKKLLRKCENKHIPNAVVSINAVGQRIYVSDVQESVYAVRYKRQENQ
LIVFADDTHPRWVTTTCVLDYDTVATADKFGNIAVIRLASGINDDVDEDPTGNKALWDRG
LLNGASQKADTVACFHVGETVMSLQKATLIPGGSESLVYTTLSGTVGVLVPFTSHEDHDF
FQHLEMHMRSEHPPLCGRDHLSFRSYYYPVKNVIDGDLCEQFNSIEPAKQKGISGDLERT
PSEVSKKLEDVRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtatttatacaatctaacgcttcagcgtgccacgggtataacccatgccgtacacggg
aatttttccggcagtaaaatgcaggagatcttggtctcgcgtggcaaatctctagaactt
ctaaggccagatccaaatacgggaaaagtccacacactgttgactgtcgaagtatttggc
attgttagatctctaatggcattccgactcactggaggtaccaaagactacattgtggtt
ggatcagattctggacgaatcgtcattctggagtacatacctgccaaaaatgcctttgat
aaagtccatcaggaaacctttggcaaaagtggatgcagaagaatcgttcctggacaatat
ctagctatagaccctaaaggaagagcagttatgattggtgctattgaaaagcagaagctt
gtttatatcttgaacagggatccagaagcccgtctcacaatctcatccccacttgaagct
cataaaagtaacacattggtctatcacactgttggcgttgatgttggttttgaaaatcca
atgttcgcttgcttagaaattgactacgaggaagcagacagtgatcctactggagatgca
gctgtaaagactcaacagaccttaaccctgtacgagcttgatcttggattaaatcacgta
gtgagaaaacatagtgagcctctggaagagcacgctaatttcctggtttctgtacctggc
ggaaacgatggtcctagtggagtgctcatctgctccgaaaattatctgacctataagaat
ctcggtgatcagcacgacatacgttgtccaatccccagacgcagaaatgacttggacgac
ccggagcgtggaatgatctttgtctgttctgcaacccacaagacaaagagcatgttcttc
tttttggcacagactgagcagggtgatatcttcaaaatcactctggagacggatgaagat
atggtcacggaaataaaacttaagtatttcgataccgttccagttgccaccagcatgtgc
gtcttaaagacagggttcttgtttgtggcttcagagttcggaaaccactacttgtatcaa
atagctcatctgggtgatgatgatgatgagccagaattcagttctgcaatgccacttgaa
gaaggtgatactttcttctttgcaccaaggcccctgagaaatttagtcctagttgatgaa
atggacagtttgtctccaataatgacctgccaggttgctgacttggcaaatgaagataca
cctcagctgtacatgacttgtgggcgagggccaagatcaacacttcgtgttttgcgacat
ggtcttgaagtatccgaaatggctgtcagtgaacttccgggtaaccctaatgcagtttgg
acagtgaaacgaagagttgacgaggagtatgatgcttacatcatagtgtccttcgtcaat
gccactcttgtgcttagcatcggtgagactgttgaggaagtcacagactcgggtttcctt
ggcacaacacccactcttagctgctccgccttgggagaagatgcgctagtgcaggtatac
cctgatggtattcgtcatatcagggctgacaagcgtgtgaacgagtggaaagcacccggg
aaaaaaaccatcgtcaaatgtgccgtgaatcaacgtcaagtcgtcattgctctgacgggt
ggtgaactcgtctacttcgagatggaccctactggacaactgaacgagtatacggaaagg
aagaagatgccttcagaagttatgtgcatggctcttggtaatgtagctactggggaacag
cgctcctggtttctggcagtcggattacaagacaatactgtaagaatcatttctctcgat
ccatcggattgtttggcacctagaagtatgcaagccctacccgcagctgctgaaagtctc
tgcatcgtggaaatgggatcgaaagaagctgatagttccgaagactccgcacctcaacag
tctagcttgtacctgaacataggattacagaacggtgtccttctcagaactgttcttgat
ccaatatcaggtgatttagcagatacgagaacccgttatttggggtcaagaccagtaaag
ttattcagaataaaaatgcaaggtaaccaagcagtattggcaatgtctagtcggtcgtgg
ctcagctattattaccaaaatcgtttccacctcactccgttgtcctatgaaagcctcgaa
ttcgcttctggattcagttcagaacaatgtcccgaaggaattgtggccatttctactaat
accttgagaattttggccctggaaaaacttggagcggttttcaaccaggtcagcttcccg
ttggaatacacgcctcgtaaatttgtcattcatcctgactccgccaatctgatagtcctc
gagaccgagcacaatgcttatactgaagaaactaagcaacagagacgcctacaaatggcc
gaagaaatgcaggaagcagctggcgcagaagaagcggctgtagccagagaattggccgaa
gcctttctttctgaagaacctaacgaggcagtgtttggagctcctagagctggacctggc
ttatgggcatccactttgagagttgtagcacctgcaaccggacaaactatcgagcttcat
cgactggaacaaaactttgctgctctatgcttgggattggtgagatttgcaaaccagggt
gatcagcagttcctgatcgttggtgtagccaaagattatcaattgaatcccagaatgagc
aacggtggatttctatacacatacaaagttaatgcagactgcacaagtctcgaactgatg
cacaaaactataatggacgaagttcccctcgccatttgtccttaccaaggtcgagttcta
gtgggagtcggaaggatgttgcgtctctatgatatgggaaagaaaaaactattacgtaaa
tgcgagaacaagcacattccgaacgctgttgtatccatcaatgccgttggacagcgtatc
tacgttagcgatgttcaagaatccgtctacgcagtcagatacaaacgacaggaaaaccag
ctgatcgtatttgccgatgacactcacccacgatgggtaacaacgacgtgcgttctcgac
tatgacactgtagctaccgctgacaaattcgggaatatcgccgtgatccgactggcatct
gggataaatgacgacgttgacgaagatcccacaggaaacaaggcgctatgggatcgagga
cttttgaacggagcgagtcaaaaagctgacacggtagcctgttttcacgtcggagaaact
gttatgtctcttcaaaaagcgactttgataccaggaggttccgagagtttggtgtacacg
actttgagtggaacggtcggcgttttagttccatttacgagccacgaagatcatgatttc
tttcaacatttagaaatgcacatgcggtcggaacacccgccactctgtggtcgcgatcat
ctctcatttagatcgtactattacccggtgaaaaatgtaatcgacggagatctctgcgaa
caatttaactccatcgaaccggctaaacaaaaagggatatccggtgacctggaaagaacc
ccatctgaagtatcgaaaaagcttgaggacgtcagaactcgatacgctttctaa
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integrated database retrieval system