Athalia rosae (coleseed sawfly): 105688178
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Entry
105688178 CDS
T09776
Name
(RefSeq) ATP-dependent RNA helicase dbp2-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
aroa
Athalia rosae (coleseed sawfly)
Pathway
aroa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105688178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aroa03041
]
105688178
03009 Ribosome biogenesis [BR:
aroa03009
]
105688178
Enzymes [BR:
aroa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105688178
Spliceosome [BR:
aroa03041
]
Complex A
U1 snRNP components
U1 related factors
105688178
Complex B
105688178
Ribosome biogenesis [BR:
aroa03009
]
Eukaryotic type
Pre-60S particles
Helicases
105688178
BRITE hierarchy
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
105688178
NCBI-ProteinID:
XP_012259708
EnsemblRapid:
ENSAEAG00005006844
LinkDB
All DBs
Position
7:complement(12717688..12726098)
Genome browser
AA seq
607 aa
AA seq
DB search
MSFRDRDRGDRRPSGGSRGGNRFGGRDSGSRFSGGGRDSSRDGGSFGGNSFKNKQPGERL
RKPRWDMNSLQPFRKDFYQPHPNVLARSPHMVEIYRSNKEVTVKGSNIPGPNIYFEEGGF
PDYVLNEIRKQGFTEPTAIQAQGWPIALSGRDMVGIAQTGSGKTLAYILPAIVHINNQPR
LARNDGPIALVLAPTRELAQQIQQVAADFGSTSQVRNTCIFGGAPKGPQARDLERGVEIC
IATPGRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSAT
WPKEVRNLAEEFLTDYIQINIGSLQLAANHNILQIVDVCEEYEKEGKLMKLLEEISNEPE
NKTIIFVETKRKVDDITRAINRFGWQAIGIHGDKSQQERDYVLNQFRASRSAILVATDVA
ARGLDVEDVKFVINLDYPSNSEDYVHRIGRTGRSQRTGTAYAFFTPGNAHKANDLIQVLE
EAKQVVNPKLYELSRNPGVFKRGRFGGRSGGGGGSGGRGSGGLRSSRGGRDGDKGGRYDR
GSGGGDRNSKWGSGGGSSYGSKSFPSNNYSSNSNSGGSYGQNNGNSYGSGGGTGGSSSGG
YRQQNGY
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgtcattccgagacagagatcgtggagatagacgtcctagtggaggaagccgaggaggc
aatcgattcggagggcgagacagtgggagccgattcagtggcggaggtagagactctagc
agagatggaggatcgtttggaggtaattcttttaaaaataagcaaccaggtgagcgtcta
cgcaagccacgatgggacatgaacagtctgcagccattccgcaaggatttttaccagcca
catccaaacgtattggcccgtagtccccatatggttgaaatttatcgatcaaataaagaa
gtcactgtcaaaggaagtaacattccagggccaaacatatattttgaggagggaggattc
cctgactatgtcctcaatgaaattcgaaagcaaggttttactgagccaactgcaatccaa
gcgcagggctggcccattgctctttctggacgcgacatggttggtattgcccaaaccggt
tcaggaaaaacactagcttacatcctcccagctatagtgcatattaacaaccaaccgcgt
cttgcccgtaacgatggacctatcgctctggtcttagcacccacaagagaattagctcaa
caaattcagcaagtcgcagctgatttcggaagcacctctcaggtccgaaacacctgcata
tttggtggagcgccaaagggaccacaagctagagatctagaaagaggtgtagagatctgc
attgcaacaccagggagattaatagatttcttagaacgaggaactacaaacctacgtaga
tgcacttatctcgtacttgacgaagctgatcgaatgctggatatgggattcgaaccacag
attagaaaaattgttgagcaaattagaccagatagacaaactctgatgtggtccgcaacc
tggcccaaggaagttcgcaaccttgctgaagagtttttgactgattacattcagattaat
attggatcactgcaactagcagcaaatcataatatcctgcaaattgttgacgtttgtgag
gagtatgagaaagaaggaaagctcatgaaactcctcgaagagatttctaacgaacctgaa
aataagacaatcatcttcgttgagacgaaaagaaaagtagatgatatcactagagctatc
aacagatttgggtggcaggccatcggtatccatggagataaaagtcaacaggaacgagac
tacgttctaaatcaattccgggctagcagatctgctatcttagttgcaactgatgtggca
gctcggggtttagatgtggaagacgtcaaatttgtgataaatttggactatccctcaaat
tctgaggactacgtacatcgcattggtcgtactggacgttcccaaagaactggaactgca
tatgcctttttcacacctgggaacgctcacaaagctaatgacctgattcaagttttggag
gaggcaaaacaagtcgtcaatccgaaattatatgagctttcccgaaaccctggcgttttt
aaaagaggaagatttggaggtcgtagtggaggaggtggaggttccggaggacgtgggagt
ggaggattacgaagttcacgtggtggtcgtgacggtgacaaagggggaaggtatgaccgt
ggaagcggtggaggagacagaaacagcaaatgggggagtggaggaggaagcagctacggc
agtaaatcatttccgtcaaataattacagtagcaacagtaatagcggaggtagttatggt
cagaacaacggaaacagttatggcagcggtggaggaacaggtggtagtagtagcggtggc
tacagacaacaaaatggatattaa
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