Athalia rosae (coleseed sawfly): 105688461
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Entry
105688461 CDS
T09776
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
aroa
Athalia rosae (coleseed sawfly)
Pathway
aroa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105688461
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aroa03019
]
105688461
03036 Chromosome and associated proteins [BR:
aroa03036
]
105688461
Messenger RNA biogenesis [BR:
aroa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105688461
Chromosome and associated proteins [BR:
aroa03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
105688461
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
105688461
NCBI-ProteinID:
XP_012260236
LinkDB
All DBs
Position
4:complement(19255301..19266493)
Genome browser
AA seq
1865 aa
AA seq
DB search
MFGQTGNTSFGGFGAGTQSSPFGQSPFSKPITTTSFGGTTAPVFGSSNNSLFGTKPTGST
SGGLFGSTATTPAFGQPATSQSSFGGFNSPSTNAGLFGGQQNANTSLFGATNPAPAFGQP
TKPAGFGFGNTTGTGLFGQTQQPTQQTTPSLFGASNTTTNTGLFGTASGFAGNNTAGGMT
GTMVKFSPLTGSDTMIKNGVTQTISTRHYCITCMKEYEGKSLEELRLEDYTAGRKGQAQG
AQTTGLFGSPAQPSLFGNPGVNTSTANTGFGSATAGFGATSQPAATSGLFGAGKPMTAFG
AAATTNSTFPFQSTTTTSNPFGANTQAKPFGAAAPTPLFGSTNTTQTPATGFGPNNTTTF
GTFGNPQPNQTIGLFNQPKSAFNMPASSASTGFGGFGQNTATNATGGLFGAKPAGTTSFG
VAPPFGATPAPTFGANTAFGASQNTGNSLFNSSFKPVGQTGFSFGATPSTSTGLGVNTGL
NLGTGSMLFGQTKPSGLFSNPAPNPSFNSGGGFGMGTNFGSNNNAIGTGLGTIAGGIGTN
PTPQNSGSMQVHQQILALVSAPFGDSPLLKNLLPASGKTEDLLKPTNATARSLNSPQYKI
ATNNSSPKVKARAVTNAQLSKKSLFEGLEEEDPILQEAFQPRANAKRLVLRPKPITVTDV
QSIDRVVNSVGIKESQTSQEPITESANKENLQQDDVPRPADDRRSSTSWLKSTLSRKNKS
PVDEFEDHQMMFGVFDTLEEGADDTVAELRTHKKPLNVSQTATLLSAGDNAQNSSNIDRS
VLNSSRSSDTSHEHDETPAMVSQTEQEPNAACVTLHRIGYYTIPSMDKLEEYVRGQTCIV
PNFTVGRRGYGNVYFPDAIDIYGLNLDKIVHFRNKEVIIYPDDEQKPTMGEGLNRRAQVT
LDRVWPLDKTLRQPITDPHRLAAMDYEGKLRRVSAKHDTKFLEYRPETGSWVFKVDHFSK
YGLSDSDDDDDNIPPNSDLKKLKATVEAESKLIGAIKKPQPEKQSSDPKQQIGLVGVTDG
LRDNQDTSLTFQSEILDETHMTLDDLYSSHHEKDKSMGLSPSAIFARVTRTDSHKLQLMK
ASFFDTDDEDIDDGIHKEQINLLAKSSTKIIPSTESIEAMEEDQTVPSFLAKESGLMKEK
KPSEVSKVNAIRPFALPQAFSSLIVRPDTVILQFPSEVLPLKESIVGKLNARCTADTGIQ
MGRSFRVGWGPGLSLISLSTQKQAAVVPLHGKFSQLGSYVAGRLLNDNTSSIVQRLQIVG
GRGGDSDNIQIFKESIIGHLRIQLDHCILGQEGDCPAVGAGVGPATLHAHCSLAQELADS
QNPDPLAFYANHVWNLCVALWGNLPDLQSETDQVKHQNVMVRREALSEWLENVLTETLTK
GISQEEPLDTKILSLLAAHKLEEACKIAREVGDHCLAVLMAQLGGAPSVRELIKQQLAVW
QYTESDAHLSPHKLKLFMLVAGEPIISLKHGFINACEALDWKQALGLHLWYVCPPTASIT
DAVNLYESAFNGSEAEAYASPPTPVYQEEDYEAEISSGKKIQDLCFHLLKLYCTGNHPLE
QLLNPLTHTVDPLDYRISWLIQQVLVAIGYSHLSDHVAALTHVNFAAQLETYGLWHWAIF
VILHLKDTGRRRSAIIDLLSRNVQLDETTEYIKQEEFLKEELGIPSMWINKAKATKARAM
KRYGEAAWYHIQGEQWNMAHELIIDHLAADAIINENLEYLKSLLSPLVPTEAHSTINGWA
HGGQLLWDYMLITAEVEALLAGKSDSTNIGYKLELLQPELKTLCAKINQFPCPTAKHRLC
QAEIAKRTAHLVRSLVLLQSDGKRSTSKSLTNLVMQLPLPEDYAQQELHHIVSMCVNELG
SQQVT
NT seq
5598 nt
NT seq
+upstream
nt +downstream
nt
atgttcggacaaactggaaatacttcctttggaggatttggtgcaggaacccagagtagc
ccatttggtcaatctccatttagcaagccaatcacaacaacgagttttggtggaacaact
gcaccagtatttggtagtagcaacaattctctgttcggcacgaagcctactggatcaact
agcggaggtctttttggtagcactgcaaccacacctgcctttgggcagccagctactagt
cagtcgtcatttggaggattcaatagtcccagtacaaatgctgggctattcggtggtcag
caaaatgcaaatactagcttgtttggtgctaccaatcctgctccagcttttggacaaccc
acaaagccggcagggtttggctttggaaatacgacaggaactggactttttggacagact
cagcagcctactcaacaaaccacaccttctctttttggagcatctaatacaacaaccaat
actggcctgtttggaactgcaagcggttttgcaggtaacaatacagcaggtggaatgacc
ggtacaatggtgaagttcagtcctctgaccggcagtgatacaatgataaaaaatggtgtg
acccaaacaatatcaactcgccattattgcatcacttgtatgaaagagtacgaaggcaag
tcattagaagaattacgtttagaagattacacagctggtcgtaaaggccaggcgcaagga
gcccaaaccactggattgtttggatcaccagcacaaccctcgctatttggtaatcctgga
gttaacaccagtactgctaatacaggatttggatcagcaacagctggttttggagctact
agtcagccagcagctacttctgggttatttggagcaggaaaaccaatgactgcttttgga
gctgcagcaactacaaacagtacattccccttccagtcaactacgacaacgtcgaatcca
tttggcgcaaacactcaagctaaaccttttggagctgctgcacccacaccactgtttggc
tctactaataccactcagacacctgctacaggctttggaccaaataatactactacattt
ggcacttttggaaatccacaacctaatcagactattggacttttcaatcagcccaaatca
gccttcaatatgcctgcatcttcagctagtactggctttggtggatttggacagaatact
gcaacaaatgctaccggaggtttatttggtgcaaaacctgctggtacaacaagctttggt
gtcgcaccaccttttggagccacacctgcaccgacttttggagctaatacagcttttggt
gcatcacaaaatacaggaaactcattattcaactcatccttcaaacctgtcggacaaact
ggattttcattcggtgccacaccctctacttctacaggactgggggtaaataccggacta
aatcttggaactggttctatgttatttgggcaaacaaaacccagtggcctctttagtaac
ccagcacctaatccgagtttcaacagtggaggtggttttggaatgggtactaattttgga
tccaataacaatgccattggaactggattagggacaatagctggaggaatcggaacaaat
ccaacaccacagaattctggatccatgcaagtccaccaacaaatcttagccttggtttca
gccccatttggcgattccccgttactcaaaaacttgttacctgcttcaggtaaaacggaa
gatcttttgaagccaacaaatgcaacagcaagatctttgaatagtcctcaatacaaaata
gccactaataacagttctccaaaggttaaagctagagcagtaacaaacgcgcaactttct
aagaaatcattgttcgaaggattggaagaagaagatccgatcttacaagaagcatttcag
cctcgagccaatgcaaagaggcttgtactgcgtccgaaaccaataactgtgacggacgtg
cagtcgatagatcgagttgtaaactcagttggcatcaaagagtctcaaacctcacaagaa
cctattacagaaagtgcaaataaagaaaacttacaacaggatgatgtcccacgccctgcc
gacgacagacgttcttctacatcttggctcaaatcaactctatcaaggaaaaataaatca
ccagttgatgaatttgaggaccatcaaatgatgtttggagtgttcgatactttggaggaa
ggtgctgatgatactgttgcagaattgagaacacacaaaaagcctctgaatgtatctcag
actgcaacactgctttcagctggagacaatgctcagaactcttctaacattgataggagt
gtattgaactcttcgcgtagctctgatacgagtcatgagcatgatgaaactcccgccatg
gtatctcaaacagaacaagagccgaatgcagcttgtgtcacactgcatcgtatcggttac
tacacaattccctctatggataaacttgaggaatatgttcgcggacaaacttgcattgta
cctaacttcacagtgggtcgcagaggatatggaaatgtttatttcccagacgcaattgat
atttatggcttgaatcttgataaaattgttcattttcgaaacaaagaggtcattatttat
cctgatgatgaacagaagccaaccatgggtgaaggattaaatcgcagagcacaagtaact
ctcgatcgtgtatggccacttgacaaaactctacgtcaaccaatcactgatccccatcgt
ctagctgcaatggattatgaaggaaagcttcgccgagtctctgctaaacatgataccaaa
tttctggaataccgtcctgaaactggatcatgggtcttcaaggtcgatcacttttcaaaa
tatggactcagtgattctgacgacgatgatgacaatattcctccaaattctgatctaaag
aaattgaaagccacagttgaggcagaatcaaaacttataggagcaataaaaaagccacag
cccgaaaaacagtcatcagacccaaagcaacagatcggtcttgtcggagttactgacgga
ttgagagacaaccaagatacgtccctcacttttcaaagcgagattttggacgaaactcac
atgaccttagatgatctttattcaagtcaccacgaaaaagataaatccatgggtctcagt
ccttctgcaatcttcgcacgtgtcacgagaacagacagtcataaattacaactgatgaaa
gctagcttttttgatacagatgacgaagacatcgatgatggtattcataaagagcaaata
aatttgcttgccaaaagctcgacaaaaataattccaagcacagaatccatagaagctatg
gaggaggatcaaaccgttccctcatttttggctaaggagtctggacttatgaaagaaaag
aagccatccgaagtctcgaaagttaatgcaatcagaccctttgctctaccccaagccttt
tcctctctcatcgtgaggcctgatacagtcattttacaatttccgtcagaagttttgcca
ttaaaagaatctattgttgggaaactgaatgctcgttgcacggctgatacaggtattcaa
atgggacgttcttttcgagttgggtggggtccgggcctgtcgcttatttctctgagcacg
caaaaacaagcagctgtggtacctttacatggtaaattcagccaactcggatcttatgta
gcgggtcgtttactaaatgataacacatcaagtattgtacagcgattacaaatagtcggt
ggtagaggtggtgattcggacaatattcaaattttcaaggagagtataattggtcatctt
cgtatacaattagaccattgcattctcggtcaagaaggtgattgcccagcagtaggagca
ggggtagggccagcgacgttgcatgctcactgcagtcttgcacaagagttagctgattca
caaaatccggatcctctggctttttatgcaaaccatgtgtggaatctttgtgtagcactt
tggggaaatctacctgatctacaatctgaaactgatcaagtaaagcaccaaaatgtgatg
gttcgaagagaggcactcagcgagtggttagaaaatgtcttaacagaaacgttgacaaag
ggaatatcacaagaggaaccattggataccaaaattctttcattacttgcggcgcataaa
ctagaagaagcttgcaaaatcgcacgagaagtaggtgatcattgtttggcagtattaatg
gctcaacttggaggagcaccgagtgtcagagaattaatcaagcaacaactagcagtgtgg
cagtatactgaaagtgatgctcacctttcgccgcataagctgaagctatttatgctcgtt
gctggagagcccattatatctttaaaacatggatttatcaatgcatgcgaggcactggat
tggaaacaagcactgggtcttcatctgtggtacgtgtgtcctcctactgcatcaattacg
gatgcagttaacctatacgaatctgcttttaatggatctgaggcagaagcgtatgcatca
ccaccgacccccgtataccaagaggaggattatgaggcagaaataagcagtggaaaaaaa
attcaagacttatgtttccacttgttgaagctatactgcaccggtaaccatcctcttgag
caacttttgaatccactgactcacactgtagatccgttggattacagaattagctggtta
atacaacaagtgctcgtggcgattggctattcacatttgtccgaccatgttgctgcattg
acacatgtaaactttgctgcacaattagaaacgtatggactctggcattgggcgattttt
gtgatattgcatctgaaagatacaggtagacggcgatcggcaatcattgatcttctgtcg
cgtaatgtccaattagacgagaccactgaatatattaaacaagaagaattcctgaaagaa
gaacttggcataccttcaatgtggatcaacaaagcaaaggccaccaaagctcgtgccatg
aaaaggtatggcgaagctgcttggtatcacatccaaggtgaacaatggaatatggctcat
gaactcataattgatcacttagctgctgatgcaattataaatgaaaatttggaatatcta
aagtcattgttaagcccactagtcccaactgaagctcacagcaccattaatggatgggcg
cacggaggacaattactgtgggattatatgttgataactgcagaagtagaagcgttactt
gctggaaagtctgacagtacaaatattggttataaacttgagttgttgcagccagaactg
aaaaccttgtgtgcaaagatcaatcaatttccttgtccaacggctaagcacaggttgtgt
caagcagaaatagccaaaagaactgcacatttagttcggagtttggtgcttttacaatct
gatggaaaaagatcgacttccaaaagtttgacaaatttggttatgcagttacctctacca
gaagactatgcccagcaggaacttcaccacattgttagcatgtgtgtgaacgaattaggg
tctcaacaggtcacataa
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integrated database retrieval system
