Athalia rosae (coleseed sawfly): 105688490
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Entry
105688490 CDS
T09776
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
aroa
Athalia rosae (coleseed sawfly)
Pathway
aroa03013
Nucleocytoplasmic transport
aroa03015
mRNA surveillance pathway
aroa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105688490
09122 Translation
03013 Nucleocytoplasmic transport
105688490
03015 mRNA surveillance pathway
105688490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aroa03019
]
105688490
03041 Spliceosome [BR:
aroa03041
]
105688490
Messenger RNA biogenesis [BR:
aroa03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
105688490
Spliceosome [BR:
aroa03041
]
Common components
Common spliceosomal components
Cap binding complex
105688490
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
Motif
Other DBs
NCBI-GeneID:
105688490
NCBI-ProteinID:
XP_012260278
LinkDB
All DBs
Position
2
Genome browser
AA seq
794 aa
AA seq
DB search
MSRRRAHDDDDGYERVYKKRRRVSENQEIEDRLESLILRVGEKSTSSLESNLEGLASVLE
ADLGLFRTKILRILTDCAIKMPEKCTIYTTLVGLLNAKNFNFGGEFVDYMVKNFKDSLKS
CKWDAARYSLRFLADLVNCHVLSCGSLMQLFDNMLDAANEDSVPQVRRDWYVFAVLSTLP
WVGRELYEKKEQELDHLMVTIEVFLNKRNKKHQPALKVWSSDTPHPQEEYLDCLWAQVRK
LRQDNWAEKHIPRPYLGFDSVLCVALQHNLPTLLPPPHHESYSYPIPTVVFRMFDYTDCP
AEGPLLPGSHAIERFLIEEHLRQIIDNHYLERKDCAAQLLNFPYKAKIPLDYCIVEVMFG
ELFKLPSPKHLEICYGSILIELCKLQPSTMPQVLAQATEILFRRIDSMAAAAFDRFVWWF
AYHLSNFQFRWSWEDWDSCLQRDAEHPRPKFIKEVLLKALRLSYYQRIRDMMPETYAELI
PLPPEPIYKYTSEGASSLPGTAAAHELVVSIRRKCTPEEVLTVLNTLPGEGENEESNTFN
PLKIDVFVQTLLNLGSKSFSHSFAAIGKFHYVFKVLAESEEAQICILRNMHALWKNHYQM
MVVLSDKFLKTGIIECSAIANWIFSREMASEFTKLYIWEILHLTIRKKNKHVIKLNTELT
DAREKLRRAESRSGSSSEDEDNTKEKSGERPSEDVVERMEEKLEAAQADQKNLFLIIFQR
FIMILSEHLVRCDTDGVDYNTHWYRWTIGRLQQVFLAHHEQVQKYSSTLETLLFTPDLDP
HILDVFHQFVSLRA
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtaggagggcacatgatgacgatgatggatacgagcgcgtctacaagaagaga
aggcgtgtgtcagagaatcaagaaatcgaggacagactcgagtcgcttattctacgagtg
ggtgaaaagtcgacatcatccttggagagcaatttagaagggttggcttctgtgctggag
gctgacctcggtttatttcgtactaaaattcttcgtatattgaccgactgtgccatcaaa
atgcctgagaaatgtactatttacacaactctggtaggactactcaatgccaagaacttc
aactttggtggtgaatttgttgattacatggtgaaaaatttcaaagactctttaaagagt
tgcaaatgggatgctgccaggtattcgctaaggtttttagccgatttggtaaactgtcac
gtcttatcgtgcggttcgctaatgcagctctttgacaacatgctcgatgctgccaacgag
gacagtgtcccacaagtcagacgagattggtacgtctttgcagttctctcaacattgcct
tgggttggacgagaactctatgagaaaaaagagcaggaattggatcacctaatggtgacc
attgaagtgtttctcaacaaacgcaataaaaaacatcagcccgccttgaaggtatggtcc
agcgatactccacatcctcaagaggaatacctagactgcctttgggcacaggtgcgaaag
cttaggcaagacaattgggcagagaaacatatccctaggccctacctaggttttgattcc
gtcttatgtgtggctcttcaacacaacctcccgactcttctacctccgcctcatcacgag
tcttactcttaccctataccaaccgtcgtcttcaggatgtttgattatacagattgccca
gcagaaggacctctgctacctggcagtcatgctatcgagagatttcttatcgaagaacac
ctcaggcagatcatcgacaatcactaccttgaaaggaaagattgtgctgctcaacttttg
aactttccatacaaagcaaaaattcctctcgattattgtatagttgaagttatgtttgga
gaactctttaagcttccctctccgaagcatttggaaatatgttatgggtcgattttgatt
gaactctgcaaattgcagccgtccacaatgccccaggttttggcacaagcaactgaaata
ttgtttcgccgcattgatagtatggctgcagctgcatttgatcgttttgtttggtggttt
gcatatcatctgagcaactttcagtttcggtggtcttgggaagactgggactcttgtcta
cagcgtgatgcggaacatcctcgccctaaatttataaaggaggtgttattaaaagctttg
agattatcttattaccaaagaatacgagacatgatgccggaaacttacgcagaattgatt
cctttgccgccagaaccgatttacaagtacacttctgaaggagcaagtagtcttccggga
accgcagctgcccacgagctcgtagtttcaatccgtcgaaaatgtacgccagaagaagtg
ttgacagttctgaataccctgccaggagagggggaaaatgaggaatcaaatacattcaat
ccactcaagatcgacgtttttgtccaaacattgctaaatcttggatcaaagagtttcagt
cacagttttgccgccattggaaagttccactacgtctttaaggttctggcagagtccgaa
gaagcccagatatgcattcttcgaaatatgcacgcactttggaaaaaccattatcaaatg
atggttgtcctctcagacaagttccttaaaactggcatcatcgagtgcagcgccattgcc
aactggatattctcacgagaaatggcatccgaattcacaaagctatacatttgggaaata
ctccatctgacaatccgtaaaaaaaataagcacgttatcaaactgaatacagaattgaca
gatgcgagagaaaagttgcgaagggcggaaagtaggtctggttcttcttccgaagacgag
gacaacaccaaagaaaaatcaggtgaaagaccgtccgaagatgtcgttgaacgaatggaa
gagaaactagaggcagctcaagcggaccaaaagaatttattcctcatcatatttcagcga
ttcataatgatcctttccgaacatttggtaagatgtgataccgatggcgtcgattacaat
acccactggtaccggtggacaataggaaggttacaacaagtatttctagctcaccacgag
caagtacaaaagtattcgtcaacattggaaaccctcttgttcacgccggacctggaccca
cacatcctcgacgtttttcaccagttcgtctcgctacgtgcgtaa
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