Athalia rosae (coleseed sawfly): 105688511
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Entry
105688511 CDS
T09776
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
aroa
Athalia rosae (coleseed sawfly)
Pathway
aroa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105688511
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aroa03041
]
105688511
03009 Ribosome biogenesis [BR:
aroa03009
]
105688511
Enzymes [BR:
aroa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105688511
Spliceosome [BR:
aroa03041
]
Complex A
U2 snRNP components
U2 related factors
105688511
Complex B
105688511
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
105688511
Ribosome biogenesis [BR:
aroa03009
]
Eukaryotic type
90S particles
Helicases
105688511
BRITE hierarchy
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_22
AAA_19
nSTAND3
SRP54
Flavi_DEAD
Myosin_head
ResIII
ABC_tran
T2SSE
AAA_7
TsaE
AAA_25
Motif
Other DBs
NCBI-GeneID:
105688511
NCBI-ProteinID:
XP_012260320
EnsemblRapid:
ENSAEAG00005011885
LinkDB
All DBs
Position
2:complement(30379159..30384030)
Genome browser
AA seq
716 aa
AA seq
DB search
MSKRRIEVVDPYVKRKNDGTIAINAPTSTSGKSQVQLNPYTHLPYTPRYHEFYKKRITLP
VFEYRADFMRLLAQHQCIVLVGETGSGKTTQIPQWCVEYSCSVGNKAVACTQPRRVAAMS
VAQRVSEEMDVALGEEVGYSIRFEDCSSPKTMLKYMTDGMLLREGMSDPMLEAYQVILLD
EAHERTLATDLLMGVLKEVVKQRSNLKLVIMSATLDAGKFQQYFDNAPLMNVPGRTHPVE
IFYTPEPERDYLEAAIRTVIQIHMCEEVAGDVLLFLTGQEEIEEACKRIKREMDNLGPEI
GELKCIPLYSTLPPNQQQRIFEPAPPTKPNGAIGRKVVVSTNIAETSLTIDGVVFVIDPG
FAKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTERAYKHEMQDNTYP
EILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALDDDGNLTDLGA
VMAEFPLDPQLAKMLIASCNHNCSNEILSITAMLSVPQCFVRPNEAKKAADNSKMRFAHI
DGDHLTLLNVYHAFKQNMEDAQWCYEHFVNYRSLKSGDNVRQQLSRIMDRFNLKRTSTEF
TSKDYYINIRKALVNGFFMQVAHLERTEHYLTIKDNQVVQLHPSSCLDHKPEWVIYNEFV
LTTKNYIRTVTDIKPDWLLKIAPQYYDLQNFPQCEAKRQLEGIQTRLDSKQYQEGF
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagcgaaggattgaagtagtggatccttatgtaaaaagaaagaatgatggaaca
atcgcaatcaatgcgccaacctcgacatcgggcaaaagtcaagtgcaactaaatccgtac
acacaccttccgtatacgccacgatatcacgaattttataagaagagaataactttacct
gtattcgagtatagagcagatttcatgaggttactagcacagcatcagtgcatcgtccta
gtgggtgaaacaggttctggcaaaactacgcaaatcccacaatggtgtgtcgaatactct
tgctcggtaggaaacaaagcggttgcttgtacacaacctagaagagtggccgccatgtcc
gtagcacagagagtttccgaagaaatggatgttgccttgggtgaggaagtgggttacagt
attcgttttgaggactgtagttctcctaaaacgatgctgaagtatatgacggatggtatg
ctgctgcgagaaggcatgtcagacccaatgttggaagcttaccaggtgattctactggac
gaagcacacgaaaggactttggctaccgatctgctgatgggagtattgaaggaggttgtt
aaacagcgttcaaatctcaagctagtcataatgagtgcgacactagatgcaggaaagttt
caacagtacttcgataatgctccattgatgaatgtgcctggtcgaacccaccctgttgaa
atattttatactccggaaccagagcgagattatctggaggcggcgataaggactgtaata
caaatccacatgtgtgaagaggtcgctggagatgtactactatttttaaccgggcaggaa
gaaatagaagaagcttgcaaaagaataaaaagggaaatggataacttgggaccagagatt
ggtgagctcaaatgtattccgctctattctacgctgcctccgaatcaacaacaacgaatt
tttgagcccgcgcctcccaccaaacccaatggagcgattggacggaaagttgtagtctcc
acaaatattgcagaaacctctctaaccatcgacggagttgtattcgtcattgatccagga
tttgccaaacagaaggtgtacaatccgagaatccgggtagaatcattgctggtttcaccg
atcagtaaggcatcggcgcaacaacgagcgggcagagcgggaagaactcgcccaggaaag
tgcttccgcttatatacggaaagagcgtacaaacatgagatgcaagacaacacatatcca
gaaattcttcgatcgaatctcggcagtgttgttttacaactgaaaaaattaggaattgac
gatctggtacacttcgacttcatggatccaccggcacctgaaacattgatgagagcgctg
gagttgctgaactatttagcggcgcttgacgacgacggaaatctgacggatttgggcgcg
gtaatggctgaattccccctggatccacaactagcaaaaatgctgattgcatcctgcaat
cacaattgcagtaatgagatactcagcatcacggcaatgctctcagtcccacagtgtttt
gtgaggccaaacgaagctaagaaggcagcagataactcgaaaatgcgatttgcacatatc
gacggggatcatctcacccttctaaacgtctaccatgccttcaaacagaatatggaggat
gcgcaatggtgctacgagcactttgtaaactaccgatcactgaaaagtggtgataatgtt
agacaacaattgagcagaatcatggataggttcaatttgaaacgcacgtcaactgaattc
acatccaaagattactacataaacattagaaaagcgcttgtcaatggatttttcatgcag
gttgcgcatttggaacgaacagagcattatctaacgataaaagataaccaagtcgtgcaa
ttgcacccaagcagctgtctcgaccacaaaccagagtgggttatctataacgagttcgtg
ctcaccacaaagaattacatcaggacagtaacggacataaaacctgactggttgctgaaa
attgccccgcaatactacgatcttcagaacttccctcaatgtgaagcaaagagacaactg
gaaggaattcaaacgcgactagactcaaaacaataccaagaaggtttctaa
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integrated database retrieval system
