Athalia rosae (coleseed sawfly): 105688720
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Entry
105688720 CDS
T09776
Name
(RefSeq) WD repeat-containing protein 43
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
aroa
Athalia rosae (coleseed sawfly)
Pathway
aroa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105688720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aroa03009
]
105688720
Ribosome biogenesis [BR:
aroa03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
105688720
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_WDHD1_1st
WD40
WDR55
Utp12
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
WD40_Gbeta
ASA1
Beta-prop_TEP1_C
Beta-prop_DCAF4
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_VPS8
UTP15_C
EIF3I
Beta-prop_NOL10_N
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_ACSF4
WDR54
Beta-prop_WDR41
Motif
Other DBs
NCBI-GeneID:
105688720
NCBI-ProteinID:
XP_012260662
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Position
6:complement(3224798..3228545)
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AA seq
613 aa
AA seq
DB search
MASTCCSAFSPDGKYLAYCGSDGKLKIWDTATSLLKQEYVPNLHLSSPCSVLAWIPVSRQ
SNSNSTSPWKKRRRKSTTEEGEETGIVAMGSVNGNVILWDTATASVSKQLQNGHAGIITA
ITWSDSNGLFTSAEDKQIVEWNVKENGIKSKWKSGKHKITALTVLTNQNSLISASKIIKW
WDLATKRLITSFTGHASEISLLNPITMKDDINYLVSGANGDRQLNVWALNKDNTDKNSVA
ILAMPDDPVSVSTHVNEESQIEVLAVTRSGTAHLFKHQPNGRSSKPLKPVLAVVIASNRG
QKESSSQISILSGKIWEDSRLLLAYGSPLGMMFEKVVPDFSEKLQCLVRSERKKSTKQDR
EFSKLKATEVDGDVEYLVAGTPTTLKRNRGSAAGLQLPMEIRLENLSLKTSTNTPGETPT
KATNMAQLLMQGLQSKDKVILREVLMRRDETLIKNTVAGMPVQTIVPLLKELTAMLQGKL
YVSKITITWLKILVQTFAGHLLSYPDIGDLLGPILGTVDEKVNLLPQLCRLKGRLALVTG
QISQASQKQDKLNEPSLLVYQEPDSSDDDSEVEELPSGSESDEIWEEASDEDMNQDADIA
NDQHDDDNISMSD
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtacatgttgctccgcgttttctccggacggtaaatacttagcgtattgtggc
agtgatggaaaattgaagatttgggatactgctacgagcctattaaaacaagaatatgta
ccaaatttacatctgtcatcaccctgcagtgtcctcgcatggatcccagttagccgtcaa
tcaaacagcaattcgacttctccatggaagaagcgcaggagaaaatctacaacggaagaa
ggggaggagacagggatagtcgctatgggttcggttaatggaaatgttattttatgggat
accgcaacagcctctgttagtaaacagctacagaatggtcacgcaggaattatcacggcc
atcacttggtcagattctaatggtttattcacatcagccgaagataagcaaatcgttgaa
tggaatgttaaagaaaatggaataaaatcgaagtggaaatctggaaagcataaaatcaca
gccctaactgtcctgaccaatcagaattcgctcatttctgctagtaagatcatcaagtgg
tgggaccttgctaccaaacgtctcattacaagctttaccggtcatgcttcggagatatct
ctgttaaatcctattacaatgaaagatgatattaactatcttgtcagcggagccaatgga
gacagacaactcaacgtttgggctttaaataaggacaatacagataagaattccgtagca
atactcgcaatgccagatgaccctgtttcggtatcaacgcatgttaatgaagaatcacaa
atagaggttttagctgtaacaagatctggtacagcgcatttattcaaacaccagccaaat
ggacgaagttccaagcctttgaaaccagttcttgctgttgtaattgcatcgaatcgaggt
cagaaagaatcctcgtcacagatctcaatcctcagtggaaagatatgggaagattcaaga
ttgcttctagcatatggttcccccttgggaatgatgtttgaaaaagtagttccagacttt
tctgaaaaattgcaatgtctagtgaggtcagaaaggaagaaatcaacgaaacaagatcga
gagttttccaagttgaaagccacagaggttgatggagacgtggagtatctggtcgcagga
acacctacaaccttgaaaaggaatagaggcagtgcggctggcctacaattaccaatggaa
attagattagaaaatcttagtctcaaaacttccactaatacacctggtgaaacgcctacg
aaagcgacgaatatggcgcaactgcttatgcagggattacaaagtaaagacaaagttata
ctccgagaggtattaatgaggcgagatgaaaccctaataaaaaatacagttgcgggaatg
ccagttcagacaatcgtccctctgctgaaagagctcaccgctatgctacaaggaaaatta
tacgtgagcaaaataacaatcacttggttaaaaatattggtacaaacgttcgctgggcat
ctactttcatatccagatattggtgatttattagggccaattttagggactgttgatgaa
aaagtcaacctactaccacaattgtgcaggctgaagggtcgactggctcttgtgactgga
cagatttcgcaagcgagtcaaaaacaagacaaactcaacgaaccgagcctactcgtttat
caagaaccagattcctctgacgatgacagtgaggtggaagaattgccatcgggaagcgaa
tctgacgaaatttgggaagaggcttccgatgaggatatgaatcaagatgcagatattgcc
aacgatcaacacgatgacgacaatatttccatgtccgattga
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