Athalia rosae (coleseed sawfly): 105688759
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Entry
105688759 CDS
T09776
Name
(RefSeq) nuclear valosin-containing protein-like isoform X1
KO
K14571
ribosome biogenesis ATPase
Organism
aroa
Athalia rosae (coleseed sawfly)
Pathway
aroa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105688759
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aroa03009
]
105688759
Ribosome biogenesis [BR:
aroa03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
105688759
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Nucleolin_bd
RuvB_N
AAA_16
AAA_22
AAA_14
AAA_5
TIP49
AAA_33
RNA_helicase
AAA_28
NPHP3_N
Mg_chelatase
AAA_2
Rad17
nSTAND3
NACHT
AAA_18
AAA_17
TsaE
IstB_IS21
ABC_tran
nSTAND_NTPase5
Parvo_NS1
Vps4_C
AAA_7
Sigma54_activat
Zeta_toxin
Sigma54_activ_2
DUF4685
Motif
Other DBs
NCBI-GeneID:
105688759
NCBI-ProteinID:
XP_012260710
LinkDB
All DBs
Position
4:complement(17688110..17692903)
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AA seq
972 aa
AA seq
DB search
MNKFGKLNPSIDIIPLQGSSSSGDKGKGIDKPKIIDEVQRSVQRDPVIVSRVYSYLLDNE
DKTYIDVNEIADQLQKNYRQYRTKKRSAFRAVVRRAYNEIVDSLSKKLDGSRDDLWNEED
EDDEDEVDLERDVPNDILNSQLLKMYKKNLDGQNGNSSDKELIDISSDDEQSKTEETSFE
RAKHSKECQYDEDPIDSKKIKATMESKGSEELKEANESSDSYKEVKKNLIHSKQQLSSIP
RSISSVSDQATPSTQSIERPLESPKTERVSKKRKIESDSRGGAEAATPAKKKRDISEPKV
RFADIGGNTKVLEEVCKLLIHMKHPEVFKQLGISPPRGFLLHGPPGCGKTLLAHAIAGEL
AVPLIKVAAPELVAGVSGESESRIRELFEQAIAVAPCVLFIDEVDAVAPHRATAQREMER
RIVAQLLACLDDLGSKENGDRVLVLGATNRPDSLDPALRRAGRFDREVSLGIPDREARAG
ILAVLATKLALAPDVSLTRLAALTPGFVGADLVALIREAAIAAVNRVFGDLKKKTADEPK
AINSEEQQEGEKIDAAIEISEPDLSIEAIPNGEVSTCKNPATSELIVPSEPNIPMPNELE
SQVFEPAAEINTITATSKSAELTDLMTWLHDQPPLSEEYLKELYIEHRDFEVALTVVQPS
AKREGFATVPDVTWSDIGSLQNIRQELQMSILAPVRHSEKCAKLGLTTPTGVLLCGPPGC
GKTLLAKAIANEAGINFISVKGPELLNMYVGESEKAVRQCFIRARNSAPCVIFFDELDAL
CPKRSEGDSSATSRVVNQMLTEMDGVEGRRGVFLMAASNRPDIIDPAVLRPGRLDRILYV
GLPSPADRVDILRALTKNGTKPKLATDVDLLRIGFSEKCHGYSGADLAALVREAGLEALK
ELISGYQGPIEVATRHVAAALEKIRPSVQEKDVKHYEKLRKIYSPVKEPDVTPMETPIDA
QLVDPTMEAMET
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatttggaaagcttaacccgtctatagacatcataccactgcaaggctcgtca
agtagtggagacaaaggcaaaggaatagataaaccgaaaatcattgacgaggtccagcga
tcagttcagagggacccggtaatcgtatctcgagtttattcgtacctgcttgacaatgaa
gacaagacatatatagatgtgaatgaaatagctgaccaattgcagaagaattatcggcag
tatcgcacaaagaaacgcagtgctttcagagcagtggtccgcagagcttacaatgagatt
gtagatagtttgtccaagaaacttgacggttctcgtgatgatctctggaatgaagaggat
gaagatgacgaggatgaagttgacttggaacgggatgtaccaaatgatatattgaacagt
cagctgttgaagatgtacaaaaaaaatttggatggtcaaaatggtaattcgagtgacaaa
gaattgatagacattagtagtgatgacgaacaaagtaaaacagaagaaacatcttttgaa
cgtgctaagcactctaaagaatgtcaatatgacgaagaccctatagattcgaaaaaaatt
aaagcgactatggagtctaaaggatctgaggaactaaaagaggcaaatgagtcgagcgat
tcatataaagaagtcaagaagaatctcatacattctaagcagcaactgtccagtatccct
agatctatttcttcagtatcagatcaagctacaccaagtacccagtcgattgaaagaccc
ctggaatcgccgaaaacagagagagtttcaaagaaacggaaaattgagagtgatagcaga
ggtggagctgaggcagcaacgcctgcaaagaaaaaacgtgatatttcagaacccaaagta
cggtttgctgatattggtggaaatacaaaagtactagaagaagtttgcaagcttttgatt
cacatgaaacatcccgaggttttcaagcaactggggatatccccacccaggggattttta
ttgcatggtccaccaggatgtggtaaaacacttttagcacacgctattgctggggaattg
gcagtgccattgataaaagtggctgctccagaattagtagcaggtgtttctggagagagc
gagtcgcgaatcagggagttatttgagcaagctattgcagtggcaccctgcgttcttttc
attgatgaagttgatgccgtagcaccgcacagagctacagcacagcgggaaatggaacga
cgaattgttgcgcagttacttgcatgcctcgacgacttgggttcaaaagaaaatggtgat
cgtgtgctggtgttgggagcgacaaatagaccagattccctagatccagctctaaggaga
gccggccgattcgatcgtgaggtatcactgggtattcctgacagggaagcaagagctggt
attttagccgtgctagcgacgaagttggctcttgcgcctgatgtcagtttaaccaggcta
gctgcactaaccccaggtttcgttggcgctgatctagttgctctgatcagagaagcagct
atagcagctgttaacagggttttcggggatttgaagaaaaagacggcagacgagccaaaa
gcgattaactcagaggaacagcaagaaggtgagaaaatcgacgctgctattgagatttcc
gaacccgacttgagtattgaggctataccgaatggtgaagtaagcacctgtaaaaacccc
gccacatcagagcttatagttccaagtgaaccaaatataccgatgccaaatgaactagag
tcacaggtcttcgaacctgctgcagaaataaacacaatcactgcaacttccaaatctgca
gagttgacagatctaatgacatggctgcacgaccaaccaccactatcggaagagtatctc
aaagaattgtacatcgaacatcgtgatttcgaagttgctcttactgttgttcagccatca
gcaaagcgagaaggatttgctactgttcctgatgtaacatggagcgacattggctcattg
caaaatattcgccaggagttacaaatgtctatactagcacctgtcaggcactcagaaaag
tgtgcaaaactcgggctcacgacgccaactggtgttttattatgtggtcctcccgggtgt
ggtaaaaccttgttagctaaagcgattgctaatgaggccggaataaacttcatttccgtc
aaaggtccagagctattgaacatgtatgttggcgaaagtgagaaagctgtgcgccagtgt
ttcattagggccagaaattctgctccttgtgttatattttttgatgaattggatgctctg
tgtccaaaaagatcagaaggcgatagttcagcaacttcaagagtcgttaatcaaatgtta
accgaaatggatggggttgaaggaagacgtggtgtgtttctcatggctgccagtaatcgc
ccagatatcatagatcccgctgtactaagacctggaagactcgacagaatattatatgtg
ggattacccagtccggctgatcgtgtggatattctgagggctttgacaaagaatgggact
aaaccaaaacttgcgacagacgtggatcttcttcgtatagggttcagtgagaaatgtcat
ggatattccggagcagacttagcagctttggttagagaggcaggtcttgaagcattgaag
gaattaatttctggatatcaaggacccatagaagttgcgacgaggcatgttgcagccgca
ttagagaagatacggccgtcagttcaagaaaaagatgtaaaacattacgaaaagttgcgg
aaaatatactcgccagtgaaggagccggatgttacaccaatggaaacgcctattgatgcg
cagttggttgacccaaccatggaagcgatggaaacgtga
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