Athalia rosae (coleseed sawfly): 105688831
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Entry
105688831 CDS
T09776
Name
(RefSeq) zinc finger protein ubi-d4 A isoform X1
KO
K13196
zinc finger protein ubi-d4
Organism
aroa
Athalia rosae (coleseed sawfly)
Pathway
aroa03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105688831
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aroa03041
]
105688831
03036 Chromosome and associated proteins [BR:
aroa03036
]
105688831
Spliceosome [BR:
aroa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
105688831
Chromosome and associated proteins [BR:
aroa03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
105688831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPF1-3_N
PHD
PHDvar_NSD
PHD_4
PHD_2
Lar_restr_allev
TNP-like_RNaseH_C
zf_RING_Vps8
zf-H2C2_2
Motif
Other DBs
NCBI-GeneID:
105688831
NCBI-ProteinID:
XP_012260831
LinkDB
All DBs
Position
6:complement(10456735..10464856)
Genome browser
AA seq
500 aa
AA seq
DB search
MAAVTALPASHHLIQVVNESNLGKIESFLNDTAYREAIENSSNYNTRLCRERRLRMPFLD
SQTGVAQNHSALFMSSRERIPGLMHGQVYTYPSKRWRKKRRQYLMHYLHPKRGGRGEIDD
GVEGVDGIIVGLNDDSKDSAALKDEHSKDAWYYDEQDMLDMDAFDEPDPDSDYDYEESYS
SKRRRRRPRGGAHHPIRGHPPSVESPGAKRTKGGGRGRKKANYDNVDSDKPFVCDLCGAR
YKTRPGLVYHYGHSHSTSSGDPAKEPSPSPADVESWSAADVNALDQPGGTRRGRQSTASS
SNSTPPPAAPPVNPGGAAVPQQQQQPPLAVQSSAAPSSPTVSTPKDDLQSAVPSPGTAVP
SPSSAKPEAVPPTTPSGEKKVGKSAQPSPYCDFCLGDARENKKTGGSEELVSCSDCGRSG
HPTCLQFTANMIVSVRKYRWQCIECKCCSICGTSDNDDQLLFCDDCDRGYHMYCLAPPLA
SPPEGSWSCQLCLAEFHRHD
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtgacagctctgccagcgtcccatcacttgattcaggtcgtcaacgagtca
aatttgggtaaaattgaaagtttcctcaatgatacggcctacagagaagcgatcgagaac
tcttccaactataataccagactatgcagagaacggagactgcgtatgcctttcttggac
tcgcagactggagtggcacagaatcactcagcgctattcatgtcttctcgagaacgaata
ccaggcttaatgcatggccaggtatatacctacccaagcaaacgatggcgaaaaaaaaga
cgccaatacctaatgcattatcttcatccaaaacgaggtggccgaggtgaaatagatgat
ggagtagaaggagtcgatgggatcattgtaggtcttaacgacgatagcaaagactctgca
gctctgaaagacgaacatagcaaggatgcttggtattacgacgagcaagatatgttagat
atggatgccttcgacgaacctgatccagatagcgactatgattatgaggaaagttatagt
agtaaacgacggagacggagacctcgaggtggtgcgcatcatcctatcaggggacatcca
ccctctgttgaaagtccaggtgccaaaagaacaaagggtggaggacgtgggcgcaaaaaa
gctaactatgacaacgttgactccgataagccattcgtttgtgacctgtgcggtgctcgg
tacaaaactagacctggtctggtataccattatggtcattcccactctacctcctctggc
gatcctgctaaggaaccaagtcccagtcccgcagatgttgaatcgtggagtgcagctgat
gtcaacgctttggaccagccaggtggtacgcgaagaggtcgtcagagcactgcttcgtcg
agcaattcaactccaccacctgccgcacctccggttaatcccggaggagcagcagtgcct
caacaacaacaacaaccaccattggcagttcaatcgtccgctgcaccatcctcccccact
gtatcgactcctaaggacgacctacagtcggctgttccttctccgggtactgcagttcct
tctccttcttcagcaaagcccgaagcggttccaccaacgacaccaagcggggaaaagaaa
gtaggaaaatcggcccagccatctccatactgtgacttctgcctgggtgatgccagagaa
aataaaaaaactggtggttccgaggagctggtatcttgcagtgattgcggccgctcagga
catccaacttgcttgcaattcactgcaaacatgatcgtatctgtacgcaagtacaggtgg
caatgtatcgagtgtaaatgctgttccatatgtggtacatcagacaacgacgaccagctg
ctgttttgcgacgactgcgaccgtggatatcatatgtattgtttggccccgccgctggca
tctcctccagagggttcctggtcgtgtcaactctgcctagccgaattccaccggcatgat
taa
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