Athalia rosae (coleseed sawfly): 105689116
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Entry
105689116 CDS
T09776
Name
(RefSeq) ATP-dependent helicase brm isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
aroa
Athalia rosae (coleseed sawfly)
Pathway
aroa03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105689116
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aroa03021
]
105689116
03036 Chromosome and associated proteins [BR:
aroa03036
]
105689116
Transcription machinery [BR:
aroa03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
105689116
Chromosome and associated proteins [BR:
aroa03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
105689116
Chromatin remodeling factors
BAF complex
105689116
PBAF complex
105689116
GBAF(ncBAF) complex
105689116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
Bromodomain
BRK
ResIII
QLQ
HDA2-3
DEAD
NirdL-like_HTH
Motif
Other DBs
NCBI-GeneID:
105689116
NCBI-ProteinID:
XP_012261329
LinkDB
All DBs
Position
2:complement(24656334..24672741)
Genome browser
AA seq
1841 aa
AA seq
DB search
MASPSPQSSPMPPPQAPSPMGPPQQASSPSNPQGSPMGPPQHHPHSPTQGYQSGPPPPGG
PSMSQPPQQQQPPPQQQGYPHPQQMPPSMGPQSQGGPGSVSQQGSGGSMGPGGPSQMGGN
SAQSGPHMGPGGPVQMGPGGPGSMGSVGPSGLNQMGPGGPGSQMGPVGPSGQIGPGGPGQ
QMGPGGPAQHIGSGGLGPQMGPGGPGQQMGPGGPSQQMGPGGPGQQMGPGGPGQQMGPGG
PGQMGPGVPGQQLGPGGSGQQMGPGGPGQMSTGGPSQIGPGGVNQMGPGGPNQMGPGALG
LMGPGGAQGGAHLGPGGPGQLGSGGAQGSSQGGPHMSQAQMGPGGLQGGSQMGPSIPSHI
SGPPGTAHMNPSGPGGHIGPSGPVQMTLSAGHSMGPGGPGQMGPGALNQMGPTGPSSISG
GPGPIGQGGPVSQIGQNSPGPMGSSNQGQGQMGPSGPGQMGLSGPGQMGPSGPGQMGPSG
PGQMGPVGPGAPGGPPVSGSTPGPGQENLNALQRAIDSMEEKGLQEDPRYSQLLALRARQ
GNNIGEKQAFSTQQLQQLRVQIMAYRLLARNQPLSQQLALAVQGGAPPPGMGQRPIDSSQ
GSVTPGPGSQISGPPAVGPVGTPRPGAPPPQQQQPQQPGAKTNRVTSIAKPAGLDPLLIL
QERENRVAARISLRMEQLSSLPTNMPEDLRVQAQIELRALRVLNFQRQLRSEIIACTRKD
TTLETAVNVKAYKRTKRQGLREARATEKLEKQQKLEAERKRRQKHQEFLTSVLQHGKDFK
EFHRNNVAKLARLNKAVLNYHANAEREQKKEQERIEKERMRRLMAEDEEGYRKLIDQKKD
KRLAFLLSQTDEYIGNLTEMVKQHKMEQRRKQVEEQKRKKKKKKLQESEGGEDGTGNGDI
RVSVIETSTGRTLTGDDAPPLSQLPAFLESHPGWEAVDTDSDEDDSEDEESEGKFESKDK
YKGDSEDDKVKKTLHKAKVEDDEYKTEEQTYYSIAHTVHEVVTEQASIMVNGNLKEYQIK
GLEWLVSLFNNNLNGILADEMGLGKTIQTIALVTHLMEKKKVNGPFLIIVPLSTLSNWVL
EFEKWAPSVVVVSYKGSPAGRRTIQSQMRATKFNVLLTTYEYVIKDKGVLAKLQWKYMII
DEGHRMKNHHCKLTQVLNTHYLAPHRLLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFE
QWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDM
SGLQKVLYKHMQSKGVLLTDGSEKGKQGKGGAKALMNTIVQLRKLCNHPFMFQAIEEKYC
EHVGIQGSTVVTGPDLYRASGKFELLDRILPKLKATDHRVLLFCQMTQLMTIMEDYLSWR
GFMYLRLDGTTKAEDRGELLKKFNDPGSEYFLFLLSTRAGGLGLNLQAADTVIIFDSDWN
PHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKST
GSERQQFLQSILHQDDADDEEENEVPDDETVNQMIARSEGEFEKFQKLDLERRREEAKLG
PNRKSRLLEEAELPDWLVKDDDEVERWTYEEDEERFLGRGSRQRKEVDYTDSITEKEWLK
AIDDDGNDFEEEEEDDKKKKKTRKRRKKGEEDDEPILKKRRGGSSGTSIDPKLKRGMKKL
IAVVVNYTDNTDGRLLSEPFMKLPSRRELPDYYEIIKKPLTINKLLQKIDEGKYTEFDDL
EKDFMQLCKNAQIYNEEASLIHEDSIVLQSVFTNARQRLEAEGTNSDGDDKGDGEDGSDG
DSSVRMKIKYKGKRSGENRGGRRKRVTKKYISDDDEDGDDN
NT seq
5526 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtccctcgcctcagtcttcacctatgccgcctccgcaagcacctagtccaatg
ggtcctcctcagcaggcttcgtccccatccaatcctcaaggtagtccaatgggaccacct
caacatcacccacatagccctactcaaggatatcaaagtggtccaccgcccccaggaggt
ccgtccatgtcacagccaccacagcagcagcagccccctccacagcaacaaggttatcct
catccacagcaaatgccaccaagtatgggacctcagagccaaggcggtccaggttcagtg
tctcaacaaggttcaggaggatcaatgggacctggtggtccaagtcagatgggtggaaac
agtgctcagagtgggccgcacatgggtccaggtggtcctgtgcagatgggacctggagga
ccaggctcgatgggttcagtaggccctagtgggctaaatcaaatgggtccgggaggtcca
ggtagtcaaatgggccctgtagggccttcgggacaaattggacctggaggcccagggcaa
cagatgggtccaggtggtccggcacagcatataggttcaggtggtctaggaccgcaaatg
gggcctggtggtccagggcagcaaatgggccctggtgggcctagtcaacagatgggacct
ggtggccctggacaacaaatgggccctggagggcctggtcagcaaatgggtcctggtggc
ccagggcagatgggtcctggagtaccgggacaacaattgggaccaggtgggtccggacaa
cagatgggacctggagggccgggccaaatgagtactggtggcccaagccaaataggtcct
ggtggtgtgaaccaaatgggtccgggcgggccaaaccagatgggtcctggtgcgcttgga
ttgatgggaccaggtggagctcaaggaggagctcatttgggtccaggaggcccgggacaa
ctcggatctggtggagcacaggggtcatcacaaggtggaccgcatatgagccaagcacaa
atgggtcctggcggactacaaggtggttctcaaatgggaccaagtattcctagtcacata
agtggtccaccagggacagctcatatgaatcctagtggacctggaggacacattggacca
agcggtccagttcaaatgaccttaagtgctggacattcaatgggtcctggaggtcctggt
caaatgggtccaggtgctctaaatcaaatggggccaacaggtcctagctcaatatccgga
ggtcctggtccaatagggcaagggggtccggtatcacagataggacaaaattcgcctgga
ccaatgggatcgagcaaccaaggtcaggggcagatgggaccgtctggaccaggacaaatg
gggctatctgggcctggacaaatggggccatctggtccgggacaaatgggaccatcaggt
ccagggcaaatgggtcctgttggaccaggtgcaccaggtggtccacccgtttcaggaagc
acaccggggccaggacaagaaaatttaaatgccctccaaagggcgattgattcaatggag
gaaaaaggacttcaggaagatcctcgttattcacaactccttgcacttagagcacgacag
ggtaataacataggagagaaacaagcattcagtactcaacagttacagcaacttcgcgtg
cagattatggcatatagattactggcaagaaatcaacctttgtcacaacaattggcatta
gctgtccaaggaggagctcctcctccaggtatgggacagcgaccgattgattcatcccag
ggatctgtcacaccgggtcctggatcacaaattagtggtcctcctgctgttgggcctgtc
ggtaccccaaggcctggcgcaccaccaccgcaacaacaacaaccgcagcaacctggagct
aagactaatcgagtcacaagcattgcaaaacctgctgggcttgaccccttgctaatattg
caggaacgtgaaaatagggttgccgcacgtattagtcttcgcatggagcagctgagtagt
cttccgacaaatatgccggaagatcttcgtgttcaagctcagattgagttgcgagccttg
cgggtcctcaactttcagcgtcaactgagatctgagatcattgcttgtactcgtaaagac
actactttagaaacggcagttaatgtaaaagcttataaaaggaccaaacggcaaggccta
cgagaagctagagccaccgaaaaattggaaaaacagcagaagttggaggctgagcgtaag
cgcagacagaaacatcaggaatttttgacctccgttctgcagcatggcaaggatttcaag
gaattccatcgaaataacgtcgctaagttagcgcgtttgaataaagctgttctcaattat
catgctaatgccgaacgagaacaaaagaaagaacaggagcgcattgagaaagaacgtatg
cgtcgtttgatggccgaggatgaagaaggctacagaaagcttattgatcagaaaaaagat
aaacgtctggcgtttttgctttcacaaactgatgaatatatcggaaatcttacggaaatg
gtcaaacagcacaaaatggaacaaagacgaaaacaagttgaagaacagaagcgcaaaaag
aaaaagaagaagttgcaagagagtgaaggaggtgaagatggcacaggtaacggtgacatt
cgcgtttcggtcattgaaacttctactggtcgcacactgacaggcgatgatgcaccaccc
ctgagtcaactgccagcatttttagaatctcatcctggttgggaggcagtggataccgac
agcgatgaggatgacagtgaagatgaggaaagcgagggcaagtttgagagcaaagataaa
tataaaggagactctgaggatgataaggtgaagaaaacgctccacaaagctaaagttgaa
gatgatgaatacaaaactgaagaacaaacatactatagtatagctcatactgttcacgaa
gttgtcacagagcaggcatcaatcatggtcaatggcaacttgaaagaatatcaaattaag
ggtttggaatggttggtatctttgttcaataacaacctgaacggaattttggccgatgag
atgggtctaggtaagactattcaaactattgccttggttactcatcttatggaaaagaaa
aaagtcaatggaccatttttaatcatcgtcccgctctcaacgttgtctaattgggtacta
gaatttgagaaatgggcacctagtgtcgttgtggtttcatataagggatctccagccggt
cgtcgaactattcaatcgcaaatgagggcgaccaaattcaatgttctcttaactacctac
gaatacgttataaaggacaaaggtgttttagctaagctgcaatggaagtacatgataatc
gatgaaggtcatcgaatgaaaaatcatcattgtaaactaacacaagtattgaatacccat
taccttgcacctcatcgtctcttattaactggtacaccgttgcaaaacaaactcccagaa
ttatgggcgctacttaactttctattgccctccattttcaaatcttgtagtacttttgaa
cagtggtttaatgcaccttttgctactactggcgaaaaagttgagctcaacgaagaagaa
accattttgatcattcgtcgtctacacaaagtattacgtccattcctgcttcgccgcctc
aaaaaagaagttgaatcccaattaccggacaaagttgaatacatcatcaaatgcgacatg
tcaggcttacaaaaggtgctttacaaacatatgcagagcaaaggtgtactgctaacagat
ggttcggagaaaggcaaacagggcaagggtggtgctaaggctctcatgaataccatcgtg
caactaagaaaattgtgcaaccatcctttcatgttccaagctatcgaagaaaagtattgc
gagcacgttggaatccaaggatctaccgttgtgactggaccagatttgtatagagcatcc
ggtaaatttgaactactagatcgtattctgccaaagttgaaggccactgatcatagagta
ttgcttttctgtcaaatgacacaattaatgaccatcatggaagattatttgagctggaga
gggtttatgtatctacgtctggatggtactaccaaggctgaagatcgaggagaattgttg
aagaaatttaatgacccaggttccgaatattttctgtttcttttatccactagggctgga
ggtcttggtcttaaccttcaggctgcagacaccgtcattatatttgattctgactggaat
ccacaccaggatttgcaagctcaagacagagctcatcgaatcgggcagaagaacgaggtg
cgtgtactacgtttaatgaccgtcaattccgttgaggaacgcatattggctgctgcacgg
tataaattaaacatggacgagaaagttattcaagctggaatgtttgatcaaaaatcaact
ggatctgaaagacaacagtttcttcaaagtatcttgcatcaagatgatgcagatgatgag
gaagagaatgaagtgccagatgatgaaacggtaaatcagatgatagcacgttcggaaggt
gaatttgaaaaattccagaaattagatttggagcgaagaagagaagaagcgaagttaggg
cctaacagaaaatctcggctcctggaagaggcggaacttcctgattggttggtcaaagat
gacgatgaggtagaaagatggacatatgaggaagatgaagagagattcttaggtagaggt
tcccgacaacgtaaagaggtggattatacagatagtatcacggaaaaggagtggttgaaa
gcaatagatgatgatggcaatgacttcgaagaggaagaggaagacgataagaagaaaaaa
aagacacgcaagcgcagaaaaaaaggggaagaagatgatgaacctatactgaagaaacgt
agaggtggcagttctgggacatcaattgatccaaaattaaaacgtgggatgaaaaaactg
atcgcagttgttgtcaattacactgataatactgatgggcgactattgagcgagcctttc
atgaaattgccttcgagacgtgagctacctgattactatgagataattaagaagcctctg
acgataaacaaattattacagaagatcgacgagggcaagtataccgaattcgatgatctt
gaaaaagatttcatgcaattatgcaaaaatgcacagatatataatgaggaggcatcactc
attcatgaggattcgatagttttgcaatctgttttcacaaacgcaagacaaaggctggaa
gcagaaggaaccaattcagatggggatgacaaaggtgatggcgaagatggttccgatggt
gattcgagtgtgagaatgaaaataaaatataaaggtaagagaagcggggagaaccgtggg
ggacgcagaaaacgagtgacgaaaaaatatatctcggatgatgacgaagacggtgatgat
aactga
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integrated database retrieval system
