Athalia rosae (coleseed sawfly): 105689368
Help
Entry
105689368 CDS
T09776
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
aroa
Athalia rosae (coleseed sawfly)
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aroa03019
]
105689368
Enzymes [BR:
aroa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105689368
Messenger RNA biogenesis [BR:
aroa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
105689368
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_DHX34
Helicase_C
DEAD
OB_NTP_bind
HA2_C
ResIII
HA2_N
AAA_22
nSTAND3
AAA_14
AAA_19
ATPase
Motif
Other DBs
NCBI-GeneID:
105689368
NCBI-ProteinID:
XP_012261756
LinkDB
All DBs
Position
2:20359504..20365959
Genome browser
AA seq
1147 aa
AA seq
DB search
MSYSHGSRRIRRDSRSSSSNKRKRDGIEDKSLKQSSGEDPDSSFLKYRYELSKVFSAHPN
LVQDLEDFWIFVRKYEAAEKKRGKTERVVEIPEVLSSSKDLPTGYHRSYCLNFKLNLGFG
ELFARVPNTRDLTDQQMLKFQEIINLYLDFKQKEKFSKLKKLRETQANLPVSQYREEIVN
AVKNERVVIIAGDTGCGKSTQVPQYLYKAGFGKIACTQPRRIACISLAKRVAYETLTENR
TEVGYQIRFEKQRNQETKITFITEGLLLRQVSGEIGLSHYDVIVLDEVHERHLHGDFLLG
IMKCVINQRNELKLILMSATINIQLFSNYFAKEAVKVIQVPGRLYPIQLHYRPIAIDDLR
QKNDRFNPSPYVQIMQMIDKKYPQEEKGDLLIFLSGMSEITAVVDNAKEYASKTKNWIVL
PLHSTLSIAEQDKVFDYAPDNVRKCIVSTNIAETSITIDGIRFVADSGKVKEMSYDPICK
MQRLKEFWISKASAEQRKGRAGRTGPGVCYRLYSEEEYEALEKYSTPELQRVPLDSLLLQ
MVSMGLPDSRKFPFIEPPPPESIENSILSLKEHGALTDDEKLTVIGRTLSRLPVDITIGK
MLIMGSLFHQVEPVLSLAAALSIQNPFTNRAYRDTECENSRKKLESDHGDPITLLNAYKE
WLEVKQESSRDSRGTSSVSRKWCKRRGLEEQRFYEMTKLRTQFKELLQDCGLLKNTQKPS
ASMTSTERMLRHGEMKLLKTLKRTYKQAAPRKRKELKIDLFDIQMEDKDENEGEIDIKDV
EFRMRNDSSQVQSLLTAATACSYKDLMMLKLILCSGLYPQFACADEFNYCKSTSEQLFHT
KAKPYIALHPMSFFGNHPQILQLEEPDILSLPWFKSKSPLSPKHQLLAYLSLLETTKPYL
VNTLRMPAAQTLLLFAHDIDTNYTFSILVCDAWLKLEFPMPDSGQILLMKATKLRQKWDT
LLNQRLQEAEPSVASKKNTSQIEYELSQELTQFMHTTVPYTIKRLLPADLKTIYVGRGEN
SDKIDPNPFQSEFDCEANPIKGGVRLTDNITFNCLLECDWSDKLAVDMIETEWHCPNCSR
NMIVSSIEKLQHQSMCLSGIASQEIDNTSTEPVVEKKPNSQAYDCPDCKKVIYLTPIEIL
RHKRQHL
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgagctattcacatggatcgagaagaatcaggagagatagcaggtcgagttcatcgaat
aaacgaaaaagagatggaatcgaggacaaaagtttgaaacaatcctcaggagaggatcca
gactcctcgtttctgaaatatcgttacgaattgagcaaggtattctcagctcatcccaat
ctggtacaagacttggaggatttctggatatttgttaggaagtatgaagctgcggaaaag
aaacgagggaagacagaacgggtggtggaaatacctgaggttttgtcgagctcaaaagat
ctaccaactggctaccacagatcatattgtttgaatttcaaactaaatttaggttttgga
gagctctttgcgagagttccaaatactcgagatctaacggatcagcagatgttaaagttt
caagagattattaatctctacttagactttaaacaaaaagaaaaattctccaaattgaag
aagctcagagaaacacaagccaatttacctgtatcacaatatcgcgaggagattgtaaac
gcggttaaaaatgaacgagttgtcatcattgctggagatactggatgtggaaagtctacg
caggtcccccaatacttatacaaggctggatttggcaaaatagcttgcactcagccacga
agaatagcctgtatatctctggctaaaagagtggcatatgaaaccctgacggaaaatcgg
accgaagttggttaccaaataagatttgaaaagcaaaggaatcaggagaccaaaataact
ttcattacagagggattgttactgcgccaggtatctggtgaaataggactttctcattac
gacgtaattgttcttgatgaagtacacgaacgacatttacacggtgactttttactcggc
ataatgaagtgcgtaattaatcaaaggaatgaattgaaactaattctgatgtctgccact
ataaatatacagttgtttagcaactacttcgctaaagaggcagtgaaagtgatacaggtt
ccagggaggctgtatcccatacagctgcattacaggccgatagcaatagacgatctacgc
cagaaaaatgatagattcaacccaagtccctatgtgcagataatgcaaatgattgacaaa
aaatatccacaagaggagaagggggatttgctgatatttctaagcgggatgagcgagatc
actgcagtcgtcgataatgcaaaagaatatgcctcaaaaaccaagaattggatagtccta
cctctgcacagcacgctgtctatcgcagaacaagataaggtcttcgattacgccccggat
aatgtacgtaaatgcatagtatccacaaacattgcggagacatcaattacaatagacgga
ataagatttgtggccgatagtggaaaggtgaaagaaatgagctacgatccaatctgcaaa
atgcaacgactaaaggagttttggataagcaaggcaagtgctgaacaaagaaaaggaaga
gccggaagaacagggccgggggtttgctacagactttattctgaagaagagtacgaagct
ttagagaaatactcgactcctgaactacaaagagttccattggactcgttgctcctgcaa
atggtctctatggggctaccggattctaggaaattcccttttatagaacccccaccccca
gaaagtattgaaaactcaattctttcactaaaagagcatggcgcgttaacagatgatgaa
aagttgactgtgatcggaagaactctgtcgcgcttacctgttgatataactattggcaaa
atgttgataatgggatctttatttcaccaagttgagccagttctatctttagctgctgct
ctcagcattcagaatccgtttacaaacagagcgtacagagatacagaatgtgagaattcg
agaaagaaattggaatccgatcacggggatcccataacgttattgaacgcttacaaagag
tggctagaggtgaaacaggagagcagtcgcgattcgagaggtacttctagcgtgagtaga
aaatggtgcaaaagacgtggcctggaagagcaaaggttttatgagatgaccaaattgcgg
acacaattcaaagaactgcttcaagattgtggtttgctaaaaaatacacaaaaaccaagt
gcctctatgactagcacagagcggatgctcagacatggagaaatgaaattattgaaaacg
ttgaagcgtacttacaaacaagcagctcctaggaaaagaaaggagttaaaaatagacctg
ttcgacatccaaatggaagacaaagatgaaaatgaaggggagattgacataaaggatgtg
gaatttaggatgagaaatgattcatctcaagtacagagcctccttacagcagctacagcg
tgtagttacaaagatttaatgatgttgaaactaattttatgcagtggcctctacccacag
tttgcctgcgccgatgaattcaactactgtaaatcgacaagcgagcagctttttcacaca
aaagccaagccgtacatcgctctccacccaatgagcttctttggtaaccatccacaaatt
ctgcaattagaagaaccagatattttatcacttccttggttcaaatccaagtctccactt
agcccaaagcatcagctgctggcatacttgtcccttttagaaacaacaaaaccctattta
gtaaacactttgaggatgccggcagcccaaacactactactatttgctcatgacatcgat
acgaactacacattctcaattctggtttgcgacgcatggttgaagttggaatttccaatg
ccagatagcgggcaaatattgctgatgaaagctaccaaattaagacaaaaatgggacaca
cttttgaaccaaagattgcaagaagcggaaccatcagttgcttcaaaaaaaaacaccagt
caaatcgaatacgagctcagtcaagagctgacacaattcatgcacaccacagtgccctat
acaataaaacgcttacttcctgcagatctaaagacaatttacgtcggtcggggagaaaat
tcggacaaaatagaccccaatcctttccagagcgagtttgactgtgaagcaaatccaatc
aaaggtggcgtacgattgaccgataatatcactttcaattgtctacttgagtgcgactgg
agtgataaactggctgtggatatgatcgagactgaatggcactgcccaaattgcagccgc
aatatgattgtaagcagcatcgaaaaattacagcaccaaagtatgtgcttgagtgggata
gctagccaagaaatcgataacacatctactgagccagttgtggagaaaaaaccgaatagt
caggcttacgattgtccagattgtaagaaagtaatttaccttacacctatagaaatactt
aggcacaaaagacagcacttgtag
DBGET
integrated database retrieval system
