Athalia rosae (coleseed sawfly): 105689428
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Entry
105689428 CDS
T09776
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X7
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
aroa
Athalia rosae (coleseed sawfly)
Pathway
aroa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105689428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aroa03019
]
105689428
Messenger RNA biogenesis [BR:
aroa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105689428
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
105689428
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Baculo_PEP_C
CysS_C
V-SNARE
Motif
Other DBs
NCBI-GeneID:
105689428
NCBI-ProteinID:
XP_012261872
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Position
3:21484646..21491255
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AA seq
680 aa
AA seq
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MAATRKLQGEIDRCLKKVTEGVETFEDIWQKVHNATNSNQKEKYEADLKKEIKKLQRLRD
QIKSWIASGEIKDKSTLLDYRKLIETQMERFKVVERETKTKAYSKEGLGAAQKLDPAQKE
REEISNWLTNSIDVLNCQMDKFESEIESLLAGKKKKLDKDKQDRMDELKTKLDKHRYHIR
KLETLLRMLDNMSVEVDTIKRIKDDVEYYIESSQEPDFEENEYIYDDIIGLDEVELSGVG
IPSSATTDSNNSNEMGGTPTSTNSGTSPIPSPPLSSTMHNHSSDSSTDTDKKTKPVKPTA
VRPLLNSQGSIPTTGSTTILKTNLLSSSTPSKPIPMTSSHSSPSATINHIATSNAGNFAT
VAASHTNSQVIHSISSKTSSHSSENGLLSSSSTSSVASNVPPTILQQHSNPQPLQPVHIL
LNQQSQNHNSEAEMTTPIPSSSSPPSPVSSRSSPLPANSCSPVPSAANGLISKLPDGMSS
LKSIAQQVIVRAGLEIPPSEPSRNLFDSTKASNATSEAHIPPLLGVAPLGPVPLQKEHQL
QFQMMEAAYYHMPHPSDSERLRSYLPRNLCPTPPYYQQVQLPHSDTVEFFQRLSTETLFF
IFYYMEGSKGQYLAAKALKKQSWRFHTKYMMWFQRHEEPKLINEEYEQGTYIYFDYEKWG
QRKKEGFTFEYKYLEDRDLN
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgacgagaaagttgcaaggtgaaatagacaggtgccttaaaaaagtgacggag
ggcgtggagacgtttgaggacatttggcaaaaggtccacaatgccactaatagcaaccag
aaggaaaagtatgaagctgatctcaagaaagagatcaaaaagctccaaaggttacgtgac
caaattaagagctggatcgcatctggagagattaaggacaaaagtacccttcttgattat
cggaagctaatcgaaactcaaatggaaaggttcaaagttgtagaacgagaaacaaagaca
aaagcttattccaaggaaggcctaggagccgcccaaaagcttgatccagcccaaaaagaa
agggaagaaatcagtaattggcttacaaattccatagatgtgctgaactgtcagatggat
aaatttgagtctgaaatagagtcattgcttgccggaaagaaaaaaaaactagacaaagat
aagcaggatagaatggatgaactaaaaacaaagcttgacaagcaccgataccacattcgc
aagctggagacattgttgcgcatgttggataatatgtctgtcgaagttgatacgatcaag
aggataaaggatgatgtcgaatattatatcgaatcttcgcaagagccagactttgaggag
aatgaatacatttatgatgacattattggactagatgaagtcgagttatctggtgttggt
ataccttcgtcggcaacgacggatagcaacaacagtaatgagatgggaggaactccaaca
tcaacaaattcaggaacctcacccataccatctcctcctcttagttctaccatgcacaat
cattcgagtgatagttctacagatactgataaaaaaacgaagcctgtgaaaccaacagcg
gtaagaccgttgttaaattcccaaggaagtattccaacgacaggaagtaccaccatattg
aagacgaatttattatcgagcagcacgcctagcaaacccattcccatgacatctagccat
agctcgcctagcgcaacaataaatcatattgcgacatctaatgctggcaattttgcaacc
gttgctgcctcgcacactaactctcaagtcattcattctatatcgagtaaaacatcatca
catagtagtgaaaatgggctactatcatcgtcatccacatcaagcgtcgcatcaaatgtg
cccccgacaattttgcagcagcatagtaatccacagcctcttcagccagttcatatactc
ttgaatcaacaaagccaaaatcataatagcgaagctgagatgacgacgccgatcccatca
tcgtcctctccaccctcgccagtaagcagtcgatcttcaccgttacctgccaattcctgt
tcgcctgtaccatccgctgccaacggtctcatctcgaaacttcctgatggcatgtcctcg
ctaaaatccattgcacaacaagtaattgtcagagcgggtctagagattcctccctctgag
ccaagcaggaacctgttcgacagtaccaaggcatcaaatgccacctcggaagcacacatt
ccgccactacttggtgtagcgccgttaggacctgtacctcttcagaaagagcaccaactt
caattccaaatgatggaagcagcttactatcatatgcctcatccttcagactctgaacgt
cttagatcgtatttgccccgtaatttgtgtccgacgccaccttattatcaacaagttcag
ctcccacattctgataccgtggaatttttccaacgattgtccacagagacgttatttttc
atattttattatatggaaggatctaagggacagtacttggcagctaaggctctcaaaaag
cagagctggaggttccatactaaatatatgatgtggttccaaaggcatgaagagcctaaa
ctcatcaacgaagaatacgaacagggaacttacatatattttgactatgaaaaatggggg
cagcgtaaaaaagaaggcttcacttttgagtacaagtacttagaggacagggaccttaac
taa
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