Athalia rosae (coleseed sawfly): 105689772
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Entry
105689772 CDS
T09776
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 isoform X1
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
aroa
Athalia rosae (coleseed sawfly)
Pathway
aroa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105689772
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aroa03041
]
105689772
Enzymes [BR:
aroa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105689772
Spliceosome [BR:
aroa03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
105689772
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
WHD_HA2
Helicase_C
DEAD
AAA_22
AAA_19
AAA_30
nSTAND3
Flavi_DEAD
SLFN-g3_helicase
nSTAND_NTPase5
Cas3-like_C_2
T2SSE
TsaE
ATPase
Motif
Other DBs
NCBI-GeneID:
105689772
NCBI-ProteinID:
XP_012262466
LinkDB
All DBs
Position
3
Genome browser
AA seq
888 aa
AA seq
DB search
MSKYRRKESSTEGSDSDSEEERRKRDIKERDEFARRLKSKDDTKVRKVATPAGSGAAEAA
KRLKIMEVQSRDRLVPKLRVESRRKYLEKRKEDKVAELEADILDDEYLFEDQILTEREKR
EREHKKQLLQLAKEHEKAREMERVQRYHMPHERGKDAVEPEVIDLEPPQSEQSKWESDQM
SSAVFRFGAKDRKAKEDYDLLLEDEVEFVQALQIPGTSKEKKRVLSPPREGKTLTTIEET
QKSLPIYPFKHDLIQAIRDHQVLIIEGETGSGKTTQIPQYLYQAGYAEDGKIIGCTQPRR
VAAMSVAARVAHEMAVKLGNEVGYAIRFEDCTSQRTRIKYMTDGTLHREFLSEPDLATYS
VMIIDEAHERTLHTDILFGLVKDITRFRTDLKLLISSATLDATKFSEFFDDAPIFRIPGR
RFPVDIYYTKAPEADYIDACVVSILQIHATQPHGDILVFLTGQDEIETCQEMLQERVRRL
GTKLAELLILPVYANLPSDMQAKIFQPTPPGARKVVLATNIAETSLTIDNIVYVIDPGFA
KQNNFNSRTGMESLMVVPISKASANQRAGRAGRVAPGKCFRLYTAWAYQHELEDNTVPEI
QRINLGNAVLTLKALGINDLVHFDFLDPPPHETLVLALEQLYALGALNHRGELTKLGRRM
AEFPLDPMMAKMLLASERYRCSEEIATIAAMLSVNGAIFYRPKDKIIHADTARKNFHVPG
GDHLTLLNVYNQWQQSDFSTHWCYENFIQHRSMKRARDVREQLVGLMQRVEMELVSGIDE
TINIRKAITAGYFYHVSRLSKGGHYKTAKHNQTVSIHPNSSLFQELPRWLLYHELVFTTK
EFMRQVTEIESKWLLEVAPHYYKPKELEDSTNKKMPKVAGRSRPDGTN
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaataccggcggaaagaatcctcgacggaaggaagtgatagcgacagtgaagag
gaaaggcgaaagagggatatcaaggaaagagatgaatttgcacgtcgtctcaaatccaag
gatgacaccaaggtacgcaaggttgctaccccagctgggtctggagctgcggaagcagca
aagagactcaaaatcatggaggtacaatcccgagataggctcgttccaaagcttagagtg
gagtcccgtagaaaatatttggaaaagcgaaaggaagacaaggtggctgaactagaagct
gatattctcgatgatgaatatcttttcgaagatcagatcttaacggaacgagagaaaaga
gagcgtgaacataagaaacaattactacaattggctaaggaacatgaaaaagcacgcgaa
atggaacgagtacagagatatcatatgcctcatgaaagaggcaaagatgccgttgaacct
gaagttatcgatttggagccacctcagtccgaacaaagcaaatgggaatccgaccaaatg
tcatctgcagtctttcgattcggagccaaagatagaaaagctaaagaagactacgattta
ttattagaagatgaagtagagtttgtccaggctttacaaataccaggtacttctaaagaa
aagaagcgtgttctttcaccaccaagggaaggaaaaacattgactaccattgaagaaact
caaaaaagtcttcccatatatcccttcaagcatgacttgatacaggctatcagggatcat
caggtattgatcattgaaggagaaactggctctggaaagactacacaaattcctcagtat
ctttatcaggcaggttatgccgaagatggtaagatcatagggtgtactcaaccaagaaga
gtagctgccatgtctgtagcggctagggttgcacacgaaatggcagtaaaacttggaaat
gaagttggatatgctattcgttttgaagactgtacttctcaacgaactcgtatcaaatac
atgaccgatggtacgctgcatcgtgaattcctcagtgaacccgaccttgccacttacagt
gtgatgattatagatgaggctcacgaacgaacgttacacactgacattctatttggattg
gtcaaagacataacccggtttcgtacagacctcaagctgttgatatcttcagctacattg
gatgctaccaagttcagtgaatttttcgacgatgctccaatttttcgtattcccggtaga
cgatttcctgtcgacatttactatacaaaggcacctgaggcagactacatcgacgcttgc
gttgtatctatccttcaaatacatgctacgcaaccacacggagatatccttgtcttcctc
accggtcaggacgagatagagacttgccaggagatgctgcaagaacgtgtaaggagacta
gggactaaattagctgagcttcttattttacctgtctacgccaacttgcccagcgatatg
caggcaaaaatatttcagcctacacctcctggtgctcgcaaggtggttctagccacgaat
atagcagagacgtcattgacaatagacaatatcgtctatgtaatcgatccaggctttgcc
aaacagaataatttcaattctcgaaccgggatggagagcttaatggtagttccgatcagc
aaagcctccgccaatcaaagagcaggcagggcgggcagagtagcacctgggaaatgcttc
aggttgtacactgcgtgggcttatcagcatgaactagaggacaatactgtcccagaaata
caaaggattaatctcggtaacgcagtattgacgctcaaagcacttggcatcaacgatttg
gttcattttgacttcctcgatcctccgccccatgagacactggtacttgcgttggaacaa
ctgtacgccttgggagctctgaatcatcgtggagagttaacgaaacttggacggaggatg
gcagagtttcctctagatccgatgatggctaaaatgctgttggctagtgaacggtatcgt
tgttcggaggaaatagcaactattgctgctatgctctcggtcaatggagcaatcttttat
cgccccaaagacaagatcattcatgcggacactgcgagaaagaattttcacgtgcctggt
ggagatcatctcacattattaaatgtatacaatcagtggcagcaaagtgatttcagtacg
cattggtgttacgaaaatttcatccagcacagatcaatgaaacgagcaagagacgttcga
gagcagctcgtaggtctaatgcagagagttgaaatggaacttgtctcaggaatcgatgaa
actattaatataagaaaggcaataacggcaggttacttttatcacgtctcgcgattgtcg
aagggcggtcattataaaacagcgaaacacaatcaaactgtttcgatccatccaaatagt
tctctgttccaagaattgccgcgatggctgctgtatcacgagcttgtattcacaactaaa
gaatttatgcggcaggtaacagagatcgagagcaaatggctactggaagtggcaccgcat
tattacaagccaaaggaactggaagattcaacaaataagaaaatgcccaaggttgctggt
agatctcgtcccgatgggaccaactga
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