Athalia rosae (coleseed sawfly): 105689833
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Entry
105689833 CDS
T09776
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
aroa
Athalia rosae (coleseed sawfly)
Pathway
aroa03018
RNA degradation
aroa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105689833
09123 Folding, sorting and degradation
03018 RNA degradation
105689833
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aroa03019
]
105689833
03041 Spliceosome [BR:
aroa03041
]
105689833
Messenger RNA biogenesis [BR:
aroa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105689833
mRNA degradation factors
5'-3' decay
Lsm complex
105689833
Spliceosome [BR:
aroa03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
105689833
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
105689833
NCBI-ProteinID:
XP_020710175
LinkDB
All DBs
Position
3
Genome browser
AA seq
149 aa
AA seq
DB search
MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEVIDMVKEDVQMKSRGRGEMKGRGGQNQRGGRGGGGGGGGGGGRGTF
GGRGGRGPAPLGRGGNQGGNKLQNKPRTK
NT seq
450 nt
NT seq
+upstream
nt +downstream
nt
atgttgccactctctttattacgaacggcgcaaaatcatcccatgctagtcgaattgaaa
aatggtgaaacctacaacggacatttagtcagttgcgataattggatgaatatcaatctc
agagaagtcatatgcacctcaagggatggtgacaaattctggaggatgccagaatgctac
attcggggcagtacaataaaataccttaggattccagatgaagttatagatatggtcaaa
gaagatgtgcagatgaaatcaagaggcagaggtgaaatgaagggtcgcggtggtcaaaat
cagagaggtggccgtggaggcggcggtggtggaggaggaggaggtggcagaggaacattt
ggtggacgtggtggccgaggtcctgcacccttaggtagggggggcaatcaaggtggtaat
aaactccagaataaaccaagaaccaaataa
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