Athalia rosae (coleseed sawfly): 105690108
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Entry
105690108 CDS
T09776
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
aroa
Athalia rosae (coleseed sawfly)
Pathway
aroa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105690108
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aroa03019
]
105690108
03016 Transfer RNA biogenesis [BR:
aroa03016
]
105690108
Enzymes [BR:
aroa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
105690108
Messenger RNA biogenesis [BR:
aroa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
105690108
Transfer RNA biogenesis [BR:
aroa03016
]
Prokaryotic type
tRNA degradation factors
105690108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
Motif
Other DBs
NCBI-GeneID:
105690108
NCBI-ProteinID:
XP_025601917
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All DBs
Position
3:10905662..10909423
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AA seq
764 aa
AA seq
DB search
MATALVFRLIPRRTLFSKRRRYENGCGLFYCKYSTADPQPNHYEVQVPLSSGDQLRISTG
EYAKMADGCAVASIGDTAVMVTTVSKTRASSSSFLPLVVDYRQKAAAAGRIPTNFFRREL
GPSEREILTSRLIDRSLRPLFPKKYCYDTQVMCNMLAVDGVNDPDVISINAASAALSLSD
IPWDGPVGAVRVGLVDEKVVINPTRKAMQNSALNLIVTAAKNNLVVMLEGYANNLLQPDI
FKSLKAGVKECQIIINSIIQLQKKYGKPKRQVEPIPQTCNEVIESIRSLSEMRLTEIFRN
HNHNKLSRDTAVTNVRTDLIEKMKESHPEIDSAVVNEEFSEICKDVFRSLIFEDNKRCDG
RTMEQLRDISCKVDLYKPLHGSAIFQRGQTQVFCTVTLDSPESALKMDNVSMLTSGIKEK
NFFLHYDFPPFATNETGRSGPAGRREIGHGALAERGLVAILPKNYPYTIRLTSEVLESNG
SSSMASVCGGSLALMDAGVPVQSAAAGVAIGLVTKFDEKNQISDYRILTDLLGIEDYMGD
MDFKVAGTKKGITAIQADIKISGLPLPIIVEILQDAHTAKSKIIEIMNRAINQPRQIKKP
NMPVSETLEVPIHKRAKFVGIAGSNLKRILVETGVQVNQVDDTSFSIFAPNQTAMDEAKE
IIDQIITAEREPTLEFGGIYTAKIVEIRDIGVMVTLYPTMQPALLHNTQLDQRKIDHPSA
LNFEVGQEMQVKYFGRDPVSGAMRLSRKVLQSTGIASVRNLGDT
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgctcttgtctttaggttaataccgagacgtacattattttcgaaacgtaga
agatatgaaaatggttgtggcttattttattgtaagtatagtactgctgatccgcagccc
aatcactatgaggtccaagtaccgctgagcagtggggaccagcttagaatttccactggt
gaatatgcaaagatggcagatggatgtgcggtagcatctataggtgatactgcggtaatg
gttacgacagtcagtaagacacgtgcttcatcgagctcgttccttcctctggttgtggat
tacagacaaaaagcagctgcagcaggtcgtattccaacgaatttcttccgaagagaattg
ggcccaagcgaacgtgaaattctgactagtcggttgatcgaccgttcactgagaccttta
ttccccaagaaatattgctatgatacacaagtaatgtgcaacatgctcgctgttgatgga
gtcaatgatccagatgtaatttctataaacgcagcctcggctgcactgtccttatcagat
attccatgggatggacctgtaggtgctgttagagttggattagttgatgagaaagttgta
ataaacccaacaagaaaggcaatgcagaacagtgcgttgaacttaattgtcactgcagct
aaaaacaatcttgttgttatgctggagggttatgcaaataatttactccagccagatatt
ttcaagtcgttaaaagctggtgttaaagagtgccaaattatcattaatagcattatccaa
ctacaaaagaagtacggcaagcccaaacggcaagttgaacccattccacagacttgcaat
gaagtcatagagtccataagatcactttctgaaatgaggttgacggagatatttaggaat
cataatcacaacaagctatctcgtgatactgcagtgaccaatgttaggacagatttaatc
gaaaaaatgaaagagagccatccagaaattgattctgctgtggttaatgaggaattttca
gaaatctgcaaggatgtatttcgttccctcatatttgaagataacaaaaggtgtgatggg
cgaaccatggaacagttacgcgatatatcgtgcaaggttgatctttataagccgcttcat
gggtcagcaatattccaaagagggcaaacacaagtattctgcacagtaactcttgattcc
ccagagagcgctttgaaaatggataacgtatcaatgctgacaagcgggataaaggaaaag
aatttttttttgcattacgactttccaccgtttgcaactaatgagacaggaagaagtgga
cctgctgggcggcgagagattgggcatggcgctctagctgaacgagggttagtcgccata
cttcctaagaactatccctacacgataagactaaccagtgaagtgttggaatccaatggt
tcctcttcaatggcttcagtgtgcggtggaagtttagctttgatggatgctggagttccg
gtgcagtcagcggctgctggtgtagccataggcttagttacaaagtttgacgaaaaaaat
caaattagcgactacagaatcctcacggatttattgggaattgaagactatatgggtgac
atggactttaaagtagctggtacgaaaaaagggatcacagccattcaagctgacataaaa
atatcagggctcccacttccaatcatagtggagatattgcaggatgcccacaccgcaaaa
tcaaagattatcgagataatgaatcgcgcgattaaccaacctcggcaaataaaaaaacca
aatatgcccgtatcagaaactttggaggtacctattcataaacgcgcaaaatttgttgga
atcgccgggtccaatctcaagaggatactcgtggaaactggagttcaggtaaatcaagtg
gatgacacatctttctcaatatttgctcctaaccaaacggcaatggacgaagcaaaggag
ataattgatcagattataaccgcggagcgcgagccaactttggaatttgggggaatttat
accgctaagatcgtggaaattcgagacattggtgtaatggtgacactttacccaacaatg
caaccagcattgttacacaacactcagttggaccaacggaaaatcgatcatccgagtgcg
ctgaatttcgaagtaggtcaagaaatgcaggttaaatattttggacgggacccagtatca
ggcgccatgaggttatcaagaaaagttttgcaaagtactggcattgcctctgttagaaat
cttggggacacgtag
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