Athalia rosae (coleseed sawfly): 105690177
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Entry
105690177 CDS
T09776
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
aroa
Athalia rosae (coleseed sawfly)
Pathway
aroa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105690177
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aroa03019
]
105690177
Messenger RNA biogenesis [BR:
aroa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105690177
mRNA degradation factors
3'-5' decay
Pan complex
105690177
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
Motif
Other DBs
NCBI-GeneID:
105690177
NCBI-ProteinID:
XP_012263187
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All DBs
Position
3:21307335..21312314
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AA seq
608 aa
AA seq
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MDPSMFVTYSPQTNGVPQESKLATYMNRQSPGVALNTAAVTKHLSSLSLDAQKKTTASPE
FVPGRGLAGSNSSSPNLFNNSYHSQENVGGTTYFYLGTSATENVATEEGAEAIGTSSASQ
IGYVYPGTPAHLQTVKAAKSPASNSPSAPSTPPPQAVPSFFVSEGLRMDILQKNTLTLAQ
PDVVQFPDLPNEVDNYHELCPLEPIHKSTSTVLGYHTSMYKATSLKTGTRYCLRRVHDFR
LANTKCMVLVDMWKRLTHTNLVQLREVFTTKAFGDHSMVFVYDYHPGSETLLNKHFSATE
LNGYSDPFSSDPNAPRPYSHTKNTILRQQHSSMLPESVIWSYIIQLTAALRVIHAAGIAC
RSLDPTKIILSSGSRLRLSCVAIPDVVTFDGTAANPMALMPHYQQEDLLALGKLVLALAC
RSLLAVHRDNMQASLELVARTYSSDLRNLILYLLSSQQRRSVTDLMPMIGARFYTQLDAV
HLRSDILEDELAKELENGRLFRLLAKLATINERPELNMEPTWAETGDRYMLKLFRDYVFH
QVAADGRPWLDMAHIVSCLNKLDSGSHDKICLMSRDEQSVLVVSYAELRQCLEMSYAEVF
HSAKLDAV
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggatccgtcaatgtttgtcacatattccccacaaacaaatggagtcccacaggagtcc
aaacttgcaacctacatgaaccgccaaagccctggagtagcacttaatacagcggcagta
acaaagcatctctccagtctttccttggatgcacaaaagaagacaactgccagccccgaa
tttgtgccaggaagaggtcttgctggtagcaacagtagttctccaaatctattcaacaat
tcctatcattcccaggagaatgttggtggcacaacttacttttacctcggcacatcagct
acggaaaatgtggccactgaagaaggagccgaagctataggaacttcgagtgcaagtcaa
ataggctacgtatatccggggacgcctgctcatttacagactgttaaagcagcaaaatct
ccggcgtctaatagcccttcagctccctccacacctcctccgcaggctgttcccagtttt
tttgttagtgaaggcctccgaatggacattcttcaaaagaacacattgacattagctcag
ccagatgtggtacagttccctgatttgccaaacgaagtggataattatcacgaattatgt
ccgcttgaacccatccataaatctacttctactgtactcggctatcatacttccatgtac
aaggccaccagcctgaagactggcactcggtattgcctgcgccgagttcatgatttcaga
ctcgccaatacgaaatgtatggtcttggtggatatgtggaagcggttgacgcacacaaat
ttagtacaactgcgagaagtcttcacaaccaaggcctttggtgatcattccatggtattc
gtttacgattaccatcccggttccgagacactgctgaacaaacacttctcagctaccgag
ctcaacggctactcagatccgttttcgtccgacccaaacgctccccgcccttacagtcac
acgaagaatacaattttgcgacaacagcacagtagtatgcttccggagagtgttatttgg
agttacattatacaactcacggctgcacttcgcgtcatccacgcagctgggattgcgtgt
agatctctggatcccaccaaaattatcctctcgtctggaagtcgtctgcgccttagttgt
gtagcaattcctgatgtcgtaacgtttgacgggacagcagcgaatccaatggcgttgatg
cctcactatcagcaagaggacttactggcgttaggaaagcttgtgctagctctggcctgc
cgaagtctacttgctgttcatcgtgacaacatgcaggcctccctcgaattggttgctcgc
acctactcttctgatctcagaaatctcatactgtacctgctatcatcccagcagcggaga
agcgttacagatttaatgccgatgattggagctcggttttacacccaactggatgctgtt
catcttcgttcagatatcttagaagatgaacttgccaaagagttagaaaatggcagattg
ttcagattactggcaaagctcgccaccattaatgaaaggccggagctcaacatggagccc
acctgggctgaaaccggtgatcgttatatgctcaaattattccgtgactatgtatttcac
caggtcgcagctgacggaagaccctggcttgatatggcccatatagtatcctgcttgaat
aaacttgattcaggatctcatgataagatttgtttgatgtcacgggacgaacagagcgtt
ctagtggtgagttacgcagaattgcgacaatgcttggagatgtcgtatgcagaggtgttt
cattccgcgaagctagatgctgtgtag
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