Athalia rosae (coleseed sawfly): 105690275
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Entry
105690275 CDS
T09776
Name
(RefSeq) nucleoprotein TPR isoform X2
KO
K09291
nucleoprotein TPR
Organism
aroa
Athalia rosae (coleseed sawfly)
Pathway
aroa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105690275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aroa03019
]
105690275
Messenger RNA biogenesis [BR:
aroa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105690275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
ZapB
ATG16
YabA
TSC22
GBR2_CC
Motif
Other DBs
NCBI-GeneID:
105690275
NCBI-ProteinID:
XP_012263360
LinkDB
All DBs
Position
4:complement(2451056..2462591)
Genome browser
AA seq
2362 aa
AA seq
DB search
METMQENPHNVLNDILTEEELTQIPEGVSKKLKSYFDERFEEFLTAKAVCETAKQNLEQR
LETLQKENEEYKLDLDECRGKLELANKYTNELQSKVEESRSEAAKAQELLRRYEKENAEF
RHQRDIATDERDALQLQVERRDAELERAHTELTTLSAQLQAAVTAKCQALADTEEIRSRE
MTLDYKEKRLEKEQVLLSQQLANLEAELAKRISELQNLRAESSSKSLLIETQLVQRNEEL
RIANDEITKLQESKALISKRCEEIAQKLEDQRNHELSMHASYQEEVNAQTRLAEIYKRMA
DEVNAKAEEFSSAVKELQSLLEQATEQYGLLETQHNDLQVRLEEEVSQKSQIIEELTKEL
DRANDLLKEAKQERLDNAVEQLAPTAAVASRLLRKDLSLTQIYTQLVDATNELSIEKEEN
ERLKSQMNVILRELEDKAPLLQQQREDYEAAVANVTTLTTRLDDLVTENHRLREATDEAS
CIANHHTRENKRLRTEMADLGRQVCFLLKEVQESRSGSTTLTSSMMESDDLASSQIISKK
LVTFRDIEELQENNQRLLSIVRTLSAKQEEIEKATDEINSGEMKEKLGRYIEQLADMQAA
QDRQSKMLEDLLRQRDMYKNMYQQCFNQSSNNRQEPVTDEEKVEMEEDQKENEGEKEKKE
REETEKKISELETKLKQLRDEYDTYRKERSAHERMLTEEVERLRKEAGASSSRCCRLKAQ
LDSANERFHLLQANVSSYKTQIKVLEEKCSNYNTTIGKHEQSIMMLKDETLDAQARLSRA
EVQLENLRQERQLLRDSEGRLLKEREVLHRERQTQALLRADVEAIKASLERSQAEGQLRA
EQRLDDATSECAALRRRLQEEQDRFRELASHLERQATTAQQRLTEERELLEKTKAELEAA
RQVHIEDVRRLEEYSAKLRQADANSIAKPMTGDESTLKRLKELEVQVSSSQGEVRSLTEQ
LKAARLHGQQYCNIAESSETQLRELMIEHTKYKEDFEQQLKNAQVAISAIKKQNQDLQEE
VARVKSGRQETDSELREKLNVAERQLEEFEELRKEVETTKSQLTVASNALKETEEKYARE
MLLHSTDLQALARLKEESGSGAEKIANLSRERDNAIDTLQIEKSAWQEREKRLNDEVHEL
QVRMKDLDSQNALLHDQIQELSDRSAIMQSQQSNTSGHISPDTSLETMNRSFSGQEDDSK
SAEQLLRVMKYLRREKDLAVAKFDVLRAENLRLKSQAEVLEKRLKEAEALLSSQREESEI
DIVTTSKHSELLRKVETLNAITDSNRILREERDTLLVKVNELTTTVTALSDEVVPLREKV
RELSAKTEALVQENSGLKGEATRWRQRANALVERANKASPEDWRRLQTERENLSKLLTSE
RETHAKRAEEFNALKLEKSKLEEQLIQQQKQLQSQSEQLSKTLEESRKLNQDLSESMVTS
AAKLKEVTVLRKELTDKEAVLNDIKNKELKIRTIAKKYKTQFEELTKTLEEEKSKQDESR
TAGTSGASEEVIQGRENQLREEGRQELRQANVELTSRVEELSRQLTALQSETEVLKKEAE
ASKKVTVEKQEHAKLLLKGARTKIMQLTESKKVCEQELTELKTRLESNSGDPDGSEHDAR
LAAIKSQMEGRISRLEHEKTEILAEKEALLQRVTQLQRQLSSGAGGVSVTTEPPTANIKP
MSARSETPLASIRPMSVVVQSRTAAVLPTTAAAPVLVAPQQQQQQAVHTTETSSPTSSHT
DYQPASTSSSSQTTASNLRQLAVQPQLSESAESTQREEPESAETLSIQQQQCQQPNQQQQ
QTVALVSPRVEQQPQQQQQLQQQVVVSVSDQQQTVASSSTQSVSTSQGTGGHKRPRSIDT
SASGSGVVEGGPDATRQEQNPSPKTKRSRQQEVAPTPTASADVEYQVPTSSQRDQDEEVE
EGCVVVVDCDEGEGGGTQAQEEEEFDNETYEEMEEEEESPYGVEAEGEVDNNEVEIIMED
DSTGVEVPRQVQPTTAINQQHQQQSEAISSAGPTGEPTLSFGQRSSRGIAPMPRQQQQQH
LLLPQQGYEDGGDDSIVPSTPTLFVPRRDGFGEAVSSPQVPQGRFTFGEPSPTVTATATP
TMATPTGPTRAIFGSSGSGVAQVVQEGMDDTRMDLTQLEDAGTGRSVPTTPLQVSPAAAD
IPPSTSSGQSEEQETPGSGTVSTAGAATSDGNDEAVIPSIRVVTVEEQEAAQVEVTTEAL
ELTPADGGNAEGEKQDDAGPSTGDDDIVEVEVEAEAGSAEIGTDEVEDEGREAEASPSSN
TRSQKALAAAASTRGVTARRSTRSPFRTARGTRPTPIIWENQSGRGHNPTRGGLQTRGGI
GENRARGSRGRRMRKPFPYARF
NT seq
7089 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgatgcaagaaaatccacacaacgtgctaaacgatatattaaccgaagaagag
ctaacgcagattccggagggagtgagcaaaaagttgaaatcatatttcgatgaacggttt
gaagaatttcttacggcaaaagctgtctgtgaaacagctaagcaaaatttggagcaaaga
ttggagacgcttcaaaaagaaaatgaagagtataaattggatttggatgaatgtagagga
aaattggaactagctaataaatacacaaacgaacttcaaagcaaagtcgaagagtctaga
tcggaggcagcaaaagcacaagaattgctcagaaggtatgaaaaagaaaatgcagaattc
agacaccaacgagatatcgccacagatgaaagagatgccttacagctgcaggtcgaacgt
cgggatgcagagcttgaacgtgcgcacactgaacttacaacacttagcgctcaattacag
gctgcagtcacagccaaatgtcaagctctcgcagacactgaagaaatccgcagccgtgaa
atgaccctagattacaaagaaaagcgtctagagaaagaacaagtgctcttatctcaacag
ttagctaacttggaagcagaactagcaaaacgtatcagcgaattgcagaatttgcgtgct
gagtcatcatcaaaatcattactaatagaaactcaactcgtccaacgtaacgaagaacta
cgaatagctaatgatgagattacaaagttacaagagagtaaggccctgatcagcaaacgc
tgtgaagaaattgcacaaaaattagaagatcaacgtaatcatgaactttcaatgcacgct
tcgtatcaagaggaagttaatgcccaaacaagactagccgaaatttataaaaggatggca
gatgaggtgaacgcaaaggctgaagaatttagctctgctgttaaagagctacaatcactc
ttggaacaagctactgagcagtatggcttacttgaaacccaacacaatgatctacaagta
cgacttgaagaagaagtttctcaaaagtcacagataatcgaagagcttaccaaagaactg
gatcgtgcaaatgatttattgaaggaagcaaaacaagaaagattagacaacgccgttgaa
caactagctccaacagcagcagtagccagtcgattactcaggaaagatttgagtttgaca
caaatatatacccaattggtcgacgccaccaatgagttgtcaattgaaaaagaagagaac
gaacggttaaaatcacagatgaatgtaattttacgtgaactcgaagacaaggcaccctta
cttcagcaacaacgtgaggattacgaggctgcagtagccaatgtaactacgcttaccaca
cgcctggacgaccttgtgactgaaaaccatcgtctacgcgaagctacagatgaggcatcc
tgtatcgctaatcatcatacccgtgagaacaagcggctaagaacagaaatggcagatctt
ggtagacaggtgtgtttcctactaaaagaagttcaagaaagtcgtagcggctcaacaacc
ctcacatcgtcgatgatggaatccgatgatcttgcttcttcacaaataatcagcaaaaaa
ttggtaaccttcagggacatcgaagaactgcaagagaataatcaaagactcttgtccatc
gtcagaacattgtcagcaaaacaagaagagattgaaaaagcaaccgacgaaataaattct
ggggaaatgaaggagaaacttggccggtatatcgagcaactagctgacatgcaggctgcc
caggaccgacagtcgaagatgctcgaagatctattgcgtcagagggatatgtacaagaac
atgtatcagcagtgcttcaatcaatcaagcaataaccgccaggaacctgtaaccgatgag
gagaaggtggagatggaggaagatcagaaggaaaatgaaggggaaaaagaaaagaaagag
agagaagaaacagagaaaaaaatcagtgaactggaaactaaattgaagcaattacgagac
gagtatgatacctacaggaaagaaagaagtgcgcatgaacgtatgttgacagaagaagtt
gagaggttgagaaaggaagcaggggctagttcttcgcggtgttgtcgtcttaaggctcaa
ctagattccgctaatgagcgattccatcttctccaggctaacgtaagctcatacaaaaca
cagatcaaggttctggaggaaaaatgtagcaactataatactactattggaaagcacgag
caaagtatcatgatgttgaaagacgaaactctggatgcgcaggctcggctgtctcgagct
gaagttcaactggaaaatctgagacaagaaaggcaattgctgcgagactcggagggacga
ttgctcaaggagcgagaagttttgcacagagaaagacaaacgcaggctttattacgagcg
gatgtggaagcgattaaagctagcttagaacgttctcaagccgagggacaattgagagct
gaacagcgtctggacgacgctacaagtgagtgcgcggccttacgaagacgtcttcaagag
gagcaggaccgcttccgcgagctagccagtcatttagaacgtcaagcaaccactgcacag
caacgtcttacggaagaacgtgaacttcttgagaagacgaaagcggaacttgaagcagct
cggcaagtccatatcgaagatgttcggcgactcgaagaatacagtgccaaactcagacag
gccgacgctaattcaatcgccaaacccatgactggagatgaaagtacactgaaacgcctc
aaagagctcgaggtacaagtttcgagtagtcaaggggaagttaggtcgcttacggagcaa
ttaaaagcagctcgtctgcatggtcagcaatattgtaacatagcggaaagctctgagaca
cagctccgagagttgatgattgaacacacgaaatacaaggaagattttgaacaacaattg
aaaaatgcacaggtggccatatcggcgatcaaaaaacaaaatcaagacttacaggaggag
gttgctagagtaaagtctggtcgtcaggagaccgactcggaactgagagaaaaattaaat
gttgccgaacggcaattagaagaattcgaagaacttagaaaagaggttgaaacaactaaa
agccagcttacggttgcatcaaatgctcttaaagaaactgaagaaaaatatgccagagaa
atgcttcttcattccaccgacttacaggctcttgcgcgactgaaagaagaatcagggtcc
ggtgccgagaaaattgcgaatctgagtcgagaacgcgacaacgcaattgatacactacaa
attgagaagtctgcttggcaagaaagggaaaaacgattaaacgacgaagttcacgagttg
caagtccgaatgaaagatttggattcacaaaatgcattgctacacgatcagatacaagaa
ttaagtgatcgttcggctatcatgcagagtcaacaatcgaacaccagcggtcacataagt
ccagataccagtttagaaacaatgaaccgcagcttcagcggtcaagaagatgattctaaa
tcggccgaacaactgttgagagtgatgaagtatcttagaagggaaaaggatttggccgtg
gctaagttcgatgttctgagggctgagaatttgagactcaaatcacaggctgaggttttg
gagaaacgtctgaaagaagcagaggcattacttagctcacagcgtgaagaatcggaaata
gatattgtaacgacttcgaaacattccgaactactacgcaaagtcgaaacattgaacgcc
atcacggattctaatagaattcttagagaagaacgagatactttactcgttaaggtgaac
gagcttacaacgacagttacagcactttcggacgaagtagtgccgctccgtgaaaaagtc
cgcgaattatcagcaaaaactgaggctttggtacaggaaaatagcggcctcaagggagaa
gctacgcggtggcgtcaacgagcaaatgcattggtcgaaagagctaataaggcgagccct
gaggattggcgacgtttacaaactgagagagaaaatttgagcaaactactaacctctgag
cgagagacgcacgccaagagggccgaagaattcaacgcgttgaaactagaaaagtccaaa
cttgaagagcagctaatacaacaacaaaaacagcttcaatctcagagcgagcaattgtcc
aaaactttggaagaaagccgtaagcttaaccaagacctaagtgaatcaatggttacttcc
gctgcaaaattgaaggaagttacagtattgcgaaaggaactcactgacaaggaggctgta
ctaaatgatatcaagaataaagaactcaagatccgtaccatcgctaagaaatataaaacg
caatttgaagaactcacaaagactttggaggaagagaaatcgaaacaggacgaatcacgc
accgctggaacgtccggtgcatcagaggaagtaatacagggccgtgagaatcaactgagg
gaagagggtcggcaagaactacgtcaggcaaatgtagagttgacttcgagagtcgaggaa
ttatcccgtcaattaacggctctgcagagtgagacggaagttctgaagaaggaggcagaa
gcgtcgaagaaggtcaccgtagaaaaacaagagcatgcaaaactgctgctgaagggtgct
cgaaccaaaataatgcaattaaccgaatcgaaaaaggtttgcgaacaggagttgaccgag
ctaaagacgaggcttgagtcgaattccggagatcctgatggttctgaacatgacgcgaga
ttagctgctataaaatctcagatggaaggaaggatttcacgtctagagcatgaaaaaact
gaaattctcgccgaaaaagaggctctgctccaacgagtcactcaattacaaagacagttg
tcgtctggcgctgggggtgtgagtgttacaacggagccaccaaccgctaacattaaaccg
atgtcagcacgttcggaaactccacttgctagcattcgtcctatgagcgtagttgtgcag
tccagaaccgctgctgtcttacctacaactgcggcagctccagttttagtagcacctcaa
caacaacagcaacaagcagttcacacaacagagactagctcgccgactagcagccacacg
gactaccaaccggccagtacgagtagttcgtcacagaccactgctagtaatttgagacaa
ctcgccgttcagccacaactcagcgaatctgctgaatctactcagcgagaagagccggaa
agtgcggaaactttaagcatccaacaacaacagtgtcaacaacccaatcaacagcaacag
cagacggtggccttagtcagtccaagggtagaacaacaaccgcaacaacaacaacagttg
caacaacaagttgtagtcagtgtgagcgatcaacaacagacggtagctagtagctccaca
cagtcggtgagcacatcgcaaggcaccggcggtcacaagcgtccgaggagtatagatacc
tcagcatccggatcaggcgtagtcgaaggaggccccgatgctaccagacaggagcaaaat
cctagtccaaaaactaagagaagtcggcagcaggaagttgcacccactcccacagccagt
gcggacgttgaataccaggtaccaacatcgagtcaacgggaccaggatgaggaagtagaa
gaaggctgtgtggtagtagtggattgcgacgaaggtgagggtggtggaacccaggcacaa
gaagaggaagaatttgacaatgagacttacgaagaaatggaagaggaagaagagtcgccc
tacggagtggaggctgaaggagaggtggataataacgaagttgaaataataatggaggac
gattccaccggtgtcgaggtccctcgacaagttcaacccacgaccgcgatcaatcaacaa
catcagcagcagtcagaagccatcagtagtgccggtcccaccggagaaccaactttgtcg
tttggacaacggtcttcgcgcggtatcgctcccatgcctagacagcagcagcaacaacat
ttactcttgcctcagcagggttatgaggatggcggagatgatagcattgtaccaagtacc
ccaacgctattcgtacctcgtcgcgatggttttggagaagccgtcagttcccctcaagta
ccccaaggacgttttacttttggagaaccttctccaaccgtcactgcaacagcaacacca
acaatggctactcctaccggaccaacgagagctatttttggctcttcgggatccggcgtt
gctcaggtagtccaagaaggaatggacgacaccaggatggatttgacgcagctggaagat
gctggaactgggaggagcgtacccacaactccacttcaagtttcaccagctgctgccgat
ataccgccttcgacaagcagtggtcaatccgaagaacaagagacccctggatcgggaaca
gtttcaacagcaggagcagctacaagtgacggaaatgacgaagcggtcattcctagcatt
cgagtagtcacggtagaagagcaggaagctgcgcaagtagaagtcaccaccgaagccctc
gaattgacacctgctgatgggggcaatgcagaaggtgaaaaacaagacgatgcaggacct
agcaccggggacgatgatattgtagaagtggaagttgaagctgaagcaggaagtgctgaa
attggtacagatgaggtggaagatgaaggtcgggaggcagaggcctctccgtctagcaac
acacgttcccaaaaagcactggctgctgcagccagcacccgaggcgttacggcacgccgt
tccactagatcgccgttccgaacggcacggggtacgcggccaacgcctatcatttgggaa
aatcaatctggtcgagggcataatccaacgcgaggtggtctgcagaccagaggtggcatc
ggcgaaaacagagcaagaggttccagaggacgacgtatgcgaaaaccttttccttacgcg
agattttaa
DBGET
integrated database retrieval system
