Athalia rosae (coleseed sawfly): 105690356
Help
Entry
105690356 CDS
T09776
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
aroa
Athalia rosae (coleseed sawfly)
Pathway
aroa03030
DNA replication
aroa03410
Base excision repair
aroa03420
Nucleotide excision repair
aroa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105690356
03410 Base excision repair
105690356
03420 Nucleotide excision repair
105690356
03430 Mismatch repair
105690356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aroa03032
]
105690356
03400 DNA repair and recombination proteins [BR:
aroa03400
]
105690356
DNA replication proteins [BR:
aroa03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
105690356
DNA repair and recombination proteins [BR:
aroa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
105690356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_22
Rad17
AAA_5
AAA_16
PTCB-BRCT
AAA_30
BRCT_2
AAA_14
NTPase_1
AAA_33
AAA_19
AAA_assoc_2
AAA_18
RNA_helicase
AAA_17
RuvB_N
RCF1-5-like_lid
Motif
Other DBs
NCBI-GeneID:
105690356
NCBI-ProteinID:
XP_012263505
LinkDB
All DBs
Position
6:9604384..9609427
Genome browser
AA seq
1017 aa
AA seq
DB search
MHKSIKSYFTVISKKKAPDNSPNANTKQKRDPSSDEDVERLSPKKRQKPVKRSTKRRVLS
DSEDEIVESRKATPSRTNKKALQKTVSPADVFDTRPVKRIEAPQPSKKLSAQDGEFVFDE
KFVAVLDQLETSHTKQSSKTVKLGKTIGNATNTVSNEIGTTKIQSSTHRSSNSDKKLTDD
EISGCNKNTGIETNTKSDRKEKEEVMKNNSEMLRSSKNETSKAVENNKKTSNDIPYKKGI
SKLIIEKQDEQKKRKRSNEDQESDPYEDMIQKKKRGQALYQQYLHRGGARNPGSKEIPTG
ADNCLAGKSFVITGVLDSLERHEADDLIKKYGGRVVAQVSKKTDYMVLGDEPGPAKLEKA
KKLGIKTISEDDLLDMIRTRPAGQATPMTGVGMSPVGKLKNFPNRAKRKTPEPEPLTITL
PNSPPKAKDRSHPISKLPEDNSKTLTTDKPSAQVPTSPESETRAWVEKYKPKSMKQIIGQ
QGDKSNAHKLHNWLQNWQKNQCGNVKHPRPSPWAQHDGSFFKAALLSGPPGVGKTTTVQV
VCEALGLDALEFNASDTRSKRLLKEEVSELLSNKSMKGYFVDSRSKKPDLSHVLVMDEVD
GMAGNEDRGGLQELIALIKTTNVPVICICNDRNHPKMRTLSNYTYDLRFQKPRIEQIRGA
MMSICFKEKINITAEDLNRLIESTNNDIRQVLNHLSLFTKNSSVERSPEQRRVNKDLKLG
PWDVVGKVFSAEAHKTMSIHDKSDLFFHDYNISSLFVQENYLGVTPNCPKNKVLEMVADS
AESLALGDLIENAIRKTGAWSLLPTQACYSSVIPGTLMSGHMTKQITFPAWLGQNSRRGK
FDRLLQEITIHTRLATAASKDSLNLDYLKPLRDAVVRPLVVDGADGTKTALDVMSYYHLL
REDLDSLIEVSLWPGQHDPMQTLESKVKAAFTRAFNKSSIMRPYALKKSTEKKKKSDDTN
SENFSQSDAEEPESDDNDDLSTDPMIKLKKPIKAVKETVGAKKKTSKAANTKSKVRK
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgcacaagagtataaaatcttatttcacggtgatttcaaaaaaaaaagctccagataat
tcacctaatgcaaacaccaagcaaaaaagggatccatcctctgacgaagatgttgaaaga
ttatctccaaagaagcgccaaaagcctgtaaaacggagcactaagcgaagggtgttgtca
gattctgaggatgaaatagtggaatctagaaaagcaacaccttctagaacaaataaaaaa
gcacttcaaaaaacagtctctcctgcagatgtattcgatactcgacctgtcaaaagaatc
gaagcaccacaaccttctaaaaaactgtcagcgcaggatggagaatttgtttttgatgaa
aaatttgtggctgtgctagaccagttggaaacatctcataccaaacagagttccaaaacg
gtaaaacttggtaaaactattggaaatgccacaaatactgtatcaaatgaaattggcact
acgaaaatacaaagcagtactcacaggtcgtcgaattctgacaaaaagttaaccgatgat
gaaatcagtgggtgcaataaaaatactggtattgaaacaaatactaaatcggataggaag
gagaaagaagaagtaatgaaaaacaatagtgaaatgcttcgaagttcaaaaaatgagaca
tctaaagctgttgaaaacaataaaaagacgagcaatgatatcccatacaaaaaaggtatc
tcaaaattgataattgagaaacaagatgaacagaaaaaaagaaagcgaagcaatgaagat
caagaaagtgacccttacgaggatatgatccagaaaaaaaaacgtggtcaagcattatat
caacaataccttcatagaggaggtgctcggaacccaggatctaaggaaattcctacggga
gctgataattgcttagctggaaaaagttttgttataactggagttttggattcattagag
agacatgaggctgatgatttaatcaagaaatatggaggtcgagttgttgctcaagtttcc
aaaaagacagactatatggtattgggtgatgagccaggtccagcaaaattggaaaaggcc
aaaaaattgggaatcaaaacgatatcagaagatgatctgttagatatgattcgaacaaga
cctgctggacaggctacgccaatgactggcgttggaatgagtcctgtcggaaaattgaag
aactttcccaatagagctaaacgaaaaacgccagagccagaacctctaacaatcacgcta
cctaattcacccccaaaggctaaggatagatctcacccaatttctaaacttcctgaagac
aattcaaaaactttgacaacagataagccttctgcgcaggttcctacatctcctgaaagt
gagactcgagcatgggtggagaagtataagccaaagtctatgaagcaaattattggtcag
caaggtgataagagcaacgcgcacaagcttcataattggctgcaaaactggcaaaaaaat
cagtgtggaaatgtcaaacatccgcgacctagtccttgggcacaacatgatggatcattt
ttcaaagccgctcttctctctggcccgccaggcgttggtaagacaacaactgttcaagtc
gtatgtgaagcattagggctcgatgctttggaattcaatgcatctgatactcggagtaaa
agactgctgaaggaggaagtttcagagttactgagtaacaagtctatgaaaggctatttc
gttgatagtcgttccaagaagccagatctcagtcatgtgcttgttatggacgaggttgat
ggaatggctggaaatgaagatcgaggcgggttgcaagagctaattgcgcttattaagact
acgaatgtacctgtgatctgcatctgtaatgacagaaatcatccaaaaatgagaactttg
tccaattacacatacgatctcagatttcagaaacctagaatcgaacaaatcaggggtgct
atgatgtccatatgctttaaagaaaagatcaatattaccgcagaggatctcaatcggttg
attgagtcgactaataacgacattaggcaagttttgaatcatctgtcattattcaccaaa
aattcttccgttgaaagatcaccagaacaaaggcgagtcaacaaagacctaaaattgggt
ccctgggatgttgtgggaaaagttttttccgcggaggcgcacaagactatgtccatacat
gacaaaagtgatttgttcttccacgattacaacatctcctccctttttgtccaggaaaac
tacttgggtgtaaccccaaactgtcccaagaacaaggtattagaaatggtagcggattca
gctgaaagtttggcactaggagatctgattgaaaatgcgattcgaaaaactggtgcgtgg
agcttattgccgacacaggcctgttattcctctgtaattcctggaacattaatgtctggt
cacatgacaaaacaaatcacttttcctgcttggcttggacaaaattcgaggagaggaaaa
tttgacagattgctccaagaaattaccatacacacacgtcttgcaacggcggcgagcaag
gattcattaaacttggactacttgaaacctcttagggatgccgttgtcagacctttggtt
gttgacggagcggatggtactaagacagcattggatgtaatgagttactaccatttgctc
agggaagacctggactcattaatagaggtttccttgtggccaggacaacatgatccaatg
cagaccttagaaagcaaggttaaagctgcatttacgcgtgcattcaacaaaagctcaata
atgagaccgtacgcattgaaaaaaagtaccgaaaagaagaaaaagagcgatgacactaac
agtgagaatttctcacaatctgatgcagaagaacctgaatctgatgataatgacgatctt
tctaccgatccaatgatcaagttgaagaagccaatcaaagccgtgaaagaaactgtggga
gcaaaaaaaaagacaagtaaggctgcaaatacgaaatccaaggtgcggaaatag
DBGET
integrated database retrieval system
