Athalia rosae (coleseed sawfly): 105690410
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Entry
105690410 CDS
T09776
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
aroa
Athalia rosae (coleseed sawfly)
Pathway
aroa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
105690410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aroa03021
]
105690410
Enzymes [BR:
aroa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
105690410
Transcription machinery [BR:
aroa03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
105690410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Rpr2
Motif
Other DBs
NCBI-GeneID:
105690410
NCBI-ProteinID:
XP_012263608
LinkDB
All DBs
Position
6:9519185..9525843
Genome browser
AA seq
1385 aa
AA seq
DB search
MVKELYRETAVARKISHVTFGIDSRHDMERQAHIHVVSKNLYSQDSHRTPVPYGVLDRKM
GTCSNMDTCTTCGKTLNECIGHFGYIDLELPVFHVGYFRSVINILQTICKKCSHVMLKEV
EKKTYMARVLNPNTGYLSRKALRKQILEKAKKNATCPTCGELNGTIKKAGLLKIVHEKYK
NKKKVDAVVQKKLAEYNNVLEENRELEGILQSGLVHVLNPIEVQGILERIPAADIPLLLM
NPDCSLPKDLILTRIPVPPICIRPSIVSDVKAGTNEDNLTMKLSEIVFINDVIQKHRQSG
AKVQMYNEDWEFLQLHCALYVNSEMSGIPLNMQPKKSGRGLVQRLKGKQGRFRGNLSGKR
VDFSSRTVISPDPNLRIEQVGVPIHVAKILTYPERVNSCNIDLMRKLVQNGPDVHPGANF
VQQRSTEFKKFLRYGNRLKIAQELKYGDIVERHLRDEDVVLFNRQPSLHKLSIMAHKAKV
LEHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEARAEALVLMGNKSNLVTPRNGELLIA
ATQDFITGGYLLTQKDTFLNKTQACQLASCLLADTDASMNIDLPQPAILKPIEMWTGKQI
FSLILRPNKQCPIRANLRAKRKTYTHNEELCVNDSYVIIRNSELLAGSMDKSTLGSGSKQ
NIFYVLLRDWGEDASTTAMWRLARIASYYLMNRGFSIGIGDVTPGQGLLRAKQELLSAGY
SKCTEYITQMEEGRLICQPGCSEEETLEAMILKELSVIRDHAGKACLKELHPSNSPLVMA
LCGSKGSYINISQMIACVGQQAISGKRVPNGFEDRALPHFGRHSKVPAAKGFVENSFYSG
LTPTEFFFHTMGGREGLVDTAVKTAETGYMQRRLVKSLEDLCLHYDMTVRNSVGDIVQIL
YGGDGLDPTYMEGKDCPVDYKRVLDHVQAKSPYRNEVSLDGPSVINATTELLKSEDYSCL
SDEFKQELEIFMKSVAHRIVRVRQNISSESSAVQQLERLTVSQLVEFMQTCKEKYMRAKI
EPGTAVGALAAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINANSNISTPIITA
ALEDDTDPEFARRVKGRIEKTTLGEVTEYIEEVYLPDDCFLLIKLDVDRIKLLKLEVDAN
SIRYSICTSKLRLNPKLVNVRGDSIITVSPNKQKLNINYALMQLKETVPKVVIKGLPSVA
RAVIHNDDSSGKIRYRLFVEGDNMREVMATPGVLGSKTTSNNTMEVFKTLGIEAARATIM
TEIKLVMENHGMSIDRRHPMLVADLMTSRGEVLGITRHGLAKMKESVLNLASFEKTADHL
FDAAYYGQKDTISGVSESIIVGIPVPVGTGIFKLLHKAEGNKPERRQLIFDDPQYHKKIR
KPTSS
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaggaattgtacagagagactgcggtggcccgcaaaatttcccatgtcacgttt
ggaattgatagccgtcatgacatggagcggcaggcccatatccatgtcgtctctaaaaat
ctctacagccaggacagccatcgcacaccagtgccttatggggttctcgatagaaaaatg
ggtacttgctccaacatggacacttgtactacttgtggtaaaacgttaaatgaatgtatt
gggcacttcgggtacattgatttggaactccctgtgtttcatgtgggatattttaggtct
gtaataaatatccttcaaacaatttgcaagaaatgttctcatgtgatgctaaaagaggta
gaaaaaaaaacttacatggctcgtgtcttgaaccctaatacaggatatctcagccgcaaa
gctctaaggaaacaaatattagaaaaagctaaaaagaatgcaacttgtccaacttgtggt
gagctgaatggtaccatcaaaaaagctggattactaaaaattgtgcatgaaaaatacaag
aacaagaaaaaagtcgatgctgtggtacagaaaaagctcgcagaatataataatgtattg
gaagagaaccgggaactcgaaggaatccttcaaagtggacttgttcatgtcctaaatcct
attgaggttcaaggtatactagagcgtattccagcagccgatattcctttgttgctaatg
aatccagattgctccttaccaaaggatttgatcttgactagaatccctgtgcctccgatt
tgtataagacccagtattgtgtctgatgtcaaggctggcacaaacgaggataatttgact
atgaaactatccgagatagtttttattaatgatgtcatacaaaagcatcgccagagtgga
gcaaaagtacaaatgtataatgaagattgggaatttctacagctgcattgcgccttgtat
gtcaatagtgaaatgtctggcatcccactgaatatgcagccaaaaaagtctgggcgggga
ttggttcaacgactgaaagggaaacaaggcaggtttagaggaaacttatccggaaaacgt
gttgatttttctagcagaaccgtaatatcgccagatcctaatcttcgtatagaacaggtc
ggtgtaccaattcatgttgcaaaaattcttacctatcctgaaagagtgaactcctgtaat
atagacttaatgcgtaaattggttcaaaacggtcctgacgtacatccaggggctaatttt
gttcagcaaagaagtacagaatttaaaaaatttctacgatacggaaatagactgaaaata
gctcaagaactaaagtacggagacatcgttgagaggcatcttcgtgatgaggatgtagtc
ttattcaatcgccaaccgtcgttacataagcttagtatcatggcacataaggctaaggta
ttagagcatcgaaccttcagatttaacgaatgtgtttgcactccatataatgctgatttt
gacggggatgaaatgaatctgcatttaccgcagactgaggaagccagagcggaagcattg
gtgttaatggggaacaaatccaatttagtgacacctcgtaatggggaattgctcattgct
gctactcaagattttattactggtggatatctattgacacagaaagatacatttctcaac
aaaacacaagcctgtcaactagcaagctgccttttggcagataccgatgcttcgatgaac
atagatctcccacaacccgccattctcaagccaatagaaatgtggacgggcaaacaaatt
ttcagcttaatactaaggccaaataagcagtgcccgataagagctaatttaagagctaag
cgaaagacctacactcataatgaagagttgtgtgttaatgattcgtacgttataattcgt
aactctgaactgctggctggatctatggataagtctacattaggttctgggtccaaacaa
aatattttttatgtcctactgagagattggggagaagatgcttctacgacagccatgtgg
cgtttagccagaattgcgagctactaccttatgaacaggggtttttctattggtatcggc
gacgtcacacctggtcaaggattgctacgagctaagcaagaacttctttctgctgggtac
tccaagtgcaccgaatacatcacacaaatggaagaaggacgcctaatttgtcaaccagga
tgttctgaagaggaaactctagaggcgatgatcttgaaagagttatcagtaattcgtgat
catgcaggaaaagcatgtttgaaagaactacaccctagtaatagccccctcgttatggct
ctctgcggtagtaaaggaagttacatcaacatttcacaaatgattgcttgtgtgggacaa
caagccatcagtggtaaacgtgtgccaaatggttttgaggatcgcgcgctgccacatttt
ggacgtcattcaaaggttcctgcagccaagggatttgtggagaattcattctactcaggt
ctcacgccaactgaattcttctttcatacaatgggtggacgagagggtctagttgatacc
gctgtaaaaactgcagaaacgggatacatgcaaagaagattggtcaaaagtctggaggat
ctttgtctccactatgatatgaccgtgagaaactctgttggagatatagtgcagatttta
tatggtggcgatggtctagatcccacgtacatggagggaaaggattgccctgtggattac
aaaagagtcctcgatcatgtacaagcaaagtcgccatacaggaatgaagtgtctttggat
ggaccaagtgtgatcaatgctactacagagttattgaaatctgaagactattcgtgtctt
agcgatgagttcaaacaggaattagaaatattcatgaagtccgtagcgcacaggatagta
agagtgcgacaaaacatctcttcagaatcttctgccgtccagcaattggaacgtttgact
gtgtcacagttggtagaattcatgcagacatgcaaggaaaaatatatgagggcaaaaata
gaaccgggtacagctgttggggcactggccgctcagagtatcggtgagccaggaacccaa
atgaccttgaaaacttttcactttgccggtgttgcatccatgaacattacacagggtgtt
ccacgcattaaggagatcattaacgctaacagcaatattagcacaccaatcatcactgcg
gcattagaagatgacacagatccagaatttgcccgaagagtcaagggtagaatagaaaaa
actactttgggtgaagtcactgagtatattgaagaagtttatctcccagatgactgtttt
ctcttgatcaaattggatgtagacagaataaaacttctcaaattagaagtagatgcgaac
tctatccgctattcaatttgcacatcaaaacttcgcttgaatccaaaattagtgaacgtc
agaggagattcgattattacagtaagccctaacaagcaaaaactgaacataaattatgcg
cttatgcagctaaaagaaacagtcccaaaggtcgtgatcaagggtctgccgtctgttgct
agagcggtaattcacaatgatgactctagcgggaagatcagatacagattattcgtcgaa
ggtgataatatgcgagaagtgatggctacacctggcgtcttaggtagcaaaaccacatcc
aacaatacaatggaagtgtttaaaacactaggaatagaagcagctcgagcaacaatcatg
acggaaatcaagttagtcatggaaaatcacggtatgagcatagacagacgacatccgatg
ttagtcgctgatctaatgacaagcagaggcgaagttcttggcatcacacgtcatggcctt
gcgaaaatgaaagaatccgttttaaatttagcttcttttgaaaaaacagcagatcatctg
tttgatgcagcttattatgggcagaaagacacaatatcaggtgtgtcagagtcgataatc
gttggcattccagttcctgttggcacgggaatcttcaaactgcttcacaaagcggaggga
aacaagccggaaaggaggcagctgatattcgatgacccccaatatcacaagaagatccgg
aagcctacttcgtcctag
DBGET
integrated database retrieval system
