Athalia rosae (coleseed sawfly): 105690589
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Entry
105690589 CDS
T09776
Name
(RefSeq) protein RRP5 homolog
KO
K14792
rRNA biogenesis protein RRP5
Organism
aroa
Athalia rosae (coleseed sawfly)
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aroa03009
]
105690589
Ribosome biogenesis [BR:
aroa03009
]
Eukaryotic type
90S particles
Other 90S particles
105690589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1_RRP5
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
S1
TPR_19
Spt6_S1
OB_RRP5_4th
S1_2
ARM_TT21_N
ARM_TT21_5th
TPR_15
TPR_CcmH_CycH
TPR_6
TPR_16
TPPII_C
ARM_TT21
TMEM214
Motif
Other DBs
NCBI-GeneID:
105690589
NCBI-ProteinID:
XP_012263941
LinkDB
All DBs
Position
1:complement(15345359..15350329)
Genome browser
AA seq
1398 aa
AA seq
DB search
MTLKSFPRGGRKPQKHVPSNNEIGKKSRSKSRDAKNYSTAAEPEDFQVAHLVAQTADCLN
YSTLTQGMVVLGRVREAREYDLIISLPGRLIGRVQLTDISEGYTKLLQNMINAQDGRPHD
YRPLSQLFKPGDYLVCHVKQLNLTEKWRVSLSLEPELVNQNLDRTRMIKRSRIIGSVSSI
EEHGYVIDSGVANLRVFLASKDVDEDKSYFTGQQLSLMIKEVKTSDSASTITVSAKTKHN
NQAVASDTQLLDALIPGTKLVLTVTKILPNGLQVNFNENNTGYINQIYLDKPLSSYQTNG
TVRGTLLYILPTVKFAYFSLMSQEGETNTLNIGDIMTSAVPLCIEQKGILLKLPKNLRGF
VPMRRTEVDFQKINSTFAPKTRHKCRVLNYDWFDRVYICSMQKEVMKEEHFTLTSFVPGE
LITAEIIKVDIEYGSVTILVNKIKGYVPPEHVCDTGANMIEILQAGQTVKARVLRNDIER
NRLVCTMKQSLVESNLPILRNIKEATIGSQHHGTVVQVRNTGVLIQFFGDVKGWVPPRLL
GCARDEIKRSFAVGQVQAPTIVKIDEKENRMTLSLLDLKDQTERKPKISLRVGEQVECVV
TESSPQGVYVNIHKNDEKDTESGYLPAGHMAPSLEVASLLAARLTPGDKITATVFSNCPE
IILTTSFTPQEDFTNFENLKVGQYLPCSVTEISKHSLKVLLPINNYDQLGIVPNSRPSYV
GILHINQILIGKIININKINKQIELTTDLYDLWLDSVKQNSEMTNAVDVLSLYLNKVSEL
PEYDYYKSRPISKVTLGQRVTGKVEKVTEDGLVLCLNNDLRGTVRKDQSKKDLKVGDNVT
GTILWINYVYEIVEVTLKSTVVNRIAAKQASLPSSILGTQLQAEIVLITNWFVLVVLKGK
ENGRLAALPARRHLNDVEPDLKPYGIGCKLKCFVVLKSEESSLLPICVLSSVFEGRNLKS
IPKPANIEQKRKKRVASEKNAQTVPNKKAKLDNLEPDTITSSMEVEDSEIKSVKHAKQET
TEESVKKKFRKSKAKVENEVVVKTKQKEKKATVDKKLETNDASIPECGFYWDATPTPQEP
PPAESSSDSEEESKSPQKKKKLNAAERREQERQKEREIREREQALASNQLPNSPDQFDRL
VMSTPDNSLIWVQYMAYHLQATEIEKARAVAKRAIRTINFREEDEKLNVWQAWLNLESRF
GTLETLNEVFQEAVRTNDAFKIYVHMLTLHADANRQSALEKTITTITGKFKQNPQSWIEC
GTALLKIGLKDKSRHIMQRALQSLPAHQHVDLMVRFAQLENKHGDKERAQTLFEKVLSSY
PKRVDVWSAYVDSLVKSGDIPIARQVLDRASAQTLPARKMKTIFKKFITFEEKYGTPENV
ANVQQMARTYVENKFADQ
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atgacgttaaagagttttccacgaggaggacgtaagcctcaaaaacatgtaccctcaaat
aacgaaattggaaaaaaatcacgctcgaagtcacgagatgcaaagaattattctacagcg
gccgaacccgaagattttcaagtcgcacatttggtagcacaaactgcagactgtttgaat
tattctactttgacacaaggcatggttgtcttgggacgtgtccgagaggctagagagtac
gacttaatcatttcccttcctgggcgtttgattggtcgagtgcagctaacagatataagc
gaaggatacacaaagttattacaaaatatgataaatgcacaagatggaagaccacatgac
tacagaccgttgtcccagttgttcaaaccaggagactacctggtctgtcatgttaagcaa
ttgaatttaacggagaaatggagggtctctttatccttagagccagagttagtcaaccag
aacttggaccgaactcgtatgatcaaaaggtctagaattattggctctgtttcaagcata
gaagaacatgggtatgtcatcgactcaggagttgctaatctgagggtgtttttggcttcc
aaagatgtcgatgaggacaaatcatactttacaggacaacagctgtctctcatgataaaa
gaagtaaagacttcggactcagcatctacgataaccgtatcagcaaagacaaaacacaat
aatcaagcagttgcttctgacacgcaattattagatgccctgattcctggtaccaaattg
gtacttactgtgactaagattctgccaaatggattgcaagtcaattttaatgagaacaat
actggttacatcaaccagatttatttggataaacctttatcttcctaccaaacaaatgga
accgtacgtggtacattattgtacattttgccaactgtaaagttcgcatattttagtttg
atgagtcaagaaggtgaaactaacaccttaaacatcggcgatattatgacgtcggctgtt
ccattgtgcatagagcaaaaaggaattctcttgaaattaccaaagaacctacgtggattc
gtaccaatgcgcagaactgaagttgactttcagaaaataaactcaacatttgctcccaag
acaagacacaaatgtcgtgtattgaactatgattggttcgatagagtttacatttgttct
atgcaaaaagaggtcatgaaggaggaacatttcaccttaactagttttgttcccggcgaa
ctgattactgcagaaatcattaaagttgacatcgaatatggatcagtgactatactggtt
aataaaatcaagggatatgttcctccagaacatgtttgtgacaccggtgcaaatatgatt
gaaatactacaagctggtcagacggtcaaggccagagtgttgaggaacgatattgaacga
aacagactagtgtgtacaatgaagcagtcattagttgaaagcaatttacccatactgagg
aacattaaagaagccaccataggctcccaacatcacggtaccgtggtacaagtgagaaac
acaggagtattgatacagttctttggagatgtgaaggggtgggtgccaccgaggctactt
ggttgtgccagagatgaaattaaacgtagttttgctgtcggtcaagtccaagccccaacg
attgtcaaaatagatgaaaaggagaatagaatgaccctgagtctattggatctgaaagac
caaacagaacggaaaccaaaaatttcactacgcgttggtgagcaagtagaatgcgttgtc
acagaatcttctccacaaggtgtttatgttaacatccacaaaaacgatgagaaggataca
gaatcgggatatttaccggctggacatatggcgccgagtttggaggtggcaagtttatta
gctgctagactgacgcctggagataaaattacagccacagtgttttccaactgccctgag
attattttaactacttcttttacgccacaagaagatttcacgaatttcgagaacctcaaa
gttggacaatacctgccatgctccgttacagagatttctaaacatagtctgaaagtctta
ttgcctatcaataattacgatcaattgggtattgttcccaatagtcgtccaagctatgtt
ggaatacttcacatcaatcaaatattgattggtaaaatcattaacattaacaaaattaat
aaacaaattgaactaacgaccgacttatatgatctgtggctagattctgtcaaacaaaac
tccgaaatgactaatgcggttgatgttttgagtctttacctgaacaaagtaagtgagctc
ccagagtatgactactacaaaagtaggccgatatcgaaagttactttaggacagcgtgta
actggcaaagttgaaaaagttacagaagatggtctcgttttatgtttgaacaatgatttg
cgaggtacagtgcgcaaggatcaatccaaaaaggatttgaaagtgggagataacgttacc
ggcacaattctctggataaattatgtctacgaaattgtggaagtaactctgaaatccaca
gtggtgaatcgtatcgctgctaaacaggccagtttaccctccagtattttgggaacacaa
ttacaggctgaaattgtattgatcacgaattggtttgtgcttgtggttctgaaagggaag
gaaaatggaagattagcagctctgcctgctcggaggcacctgaatgacgttgagccagat
ttaaaaccttatggtatcggatgtaaactgaaatgctttgttgttttgaaatccgaagaa
tccagtctgctacctatttgcgtcttatcatcggtatttgaaggacgcaatttgaaatcg
attcctaaacctgcaaatattgaacaaaaacggaagaaacgagtcgcatctgagaaaaat
gcacagaccgtaccaaacaagaaggcaaaactggacaatttggagcctgacacgatcaca
tcatcgatggaagtagaggattcagaaatcaagtcggtaaaacatgccaagcaggagaca
acggaggaatctgtgaaaaaaaagtttaggaaatcaaaagccaaagtggaaaacgaagtt
gtagttaagacaaagcagaaagagaaaaaagcaaccgtggataaaaaattagaaacgaat
gatgcgagcattccggaatgtggattttattgggatgcgactccaaccccacaagaacca
ccacctgcagaatcatccagtgatagtgaggaggaatcaaagagtccgcagaaaaaaaag
aaattgaatgccgctgaacgcagagaacaagaaaggcaaaaagagcgtgaaattcgggag
cgagagcaagcgttagcgagtaatcagctcccaaattcgccagaccaattcgatcgactg
gttatgtcaacaccggacaattctttaatttgggtacagtacatggcctaccatctgcaa
gcaacagagatagaaaaagcaagagctgttgccaaaagagcaattaggactatcaatttc
cgagaggaagatgagaaactaaatgtctggcaggcctggctgaatttggagtccagattt
ggtacgttagaaacattgaacgaagtttttcaagaggcagtgcgaaccaatgatgcgttt
aaaatatacgtgcacatgttaacacttcacgccgatgccaacagacaatcggcattggaa
aaaacaattacgaccatcacagggaaattcaaacaaaacccacaatcttggatcgagtgt
ggtactgcgttgttgaaaataggactcaaagataaatccaggcacataatgcaaagagct
ttgcagtctctgccagcgcaccagcatgttgacctgatggtgagatttgcgcaattggaa
aataaacatggagataaagagagagcacaaacattatttgaaaaagtactgagctcgtat
cccaaacgcgtcgatgtgtggtccgcttatgttgattctttagttaaatccggtgacata
ccaattgcgagacaagttttagacagagcgagtgcccaaactctaccagcgaggaaaatg
aaaacgatattcaagaagtttattacattcgaagaaaagtatgggacgccggagaacgtt
gccaacgttcaacaaatggcccgaacttacgttgaaaataaatttgcggatcaatga
DBGET
integrated database retrieval system
