Athalia rosae (coleseed sawfly): 105690683
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Entry
105690683 CDS
T09776
Name
(RefSeq) ATP-dependent RNA helicase dbp4-like
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
aroa
Athalia rosae (coleseed sawfly)
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aroa03041
]
105690683
Enzymes [BR:
aroa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105690683
Spliceosome [BR:
aroa03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
105690683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Helicase_RecD
AAA_30
Motif
Other DBs
NCBI-GeneID:
105690683
NCBI-ProteinID:
XP_012264126
LinkDB
All DBs
Position
7:14295695..14299396
Genome browser
AA seq
1051 aa
AA seq
DB search
MLRQMAHQVDSKSRTNDIKISEDVTFFQMGLSSKVFDGLTNSGFQRPSPIQLKAIPLGRC
GFDLIMRAKSGTGKTAVFGIIALEMLDLQVKGIQVLILAPTREIALQVSEVLTTIGSQLT
GLKVESFIGGLSIEDDRKRVNHCHIAVGAPGRVRHLMDKGILKINSVRLFVLDEADKLME
TSFQKDINYIFSKLPVNKQVISSSATYPGDLENFLGKYMRSPVLTSPNNDGPVLIGLRQF
VVVVKHHPNAMRQVQIKVEELLKIFTKIPFKQSIIFSNYQSRAQSVCSKINAMGFSAIYI
VGNQLMQKRIEGFKKLKDFKCRIMVTTDLTARGIDAENVNLVINLDVPLDGATYLHRIGR
AGRYGSHGIAVTIVSEDEIENFRELLASVGGTEFSILKLPQNYPDDIWNENDCVFERIHA
KSDKDDKETEIINDSVAKSQHGIPLIPKNVSHIETSSLPAANIEVTETGATSNSLWTNSR
YTRNSIKLDSLFKIEETLGFDDQKTIDSQFRAKQTITDLKEESSQVHKFKAKASGTENPS
TMQKLNKDITFQVNLSGLSEENDDCNLAQEAVVECLRSGPRKMSEVKEVLKTQEDRVPDK
FNAESMIELLENAFEQLQTQNNINRETDVEKTLKLQDILRDLKNLLSSGKSEDSINFDKV
YLTLKEVSRWRERLDFEIGWLKAALDIPHGWASNKWHRLVYKEHYSAMMTFLEMQKQALL
LVYPDIQTEDDDCPPVPIEIFREVDEFAKTHRIVRKHLNTYFPYPTCLEETLPQLVFTNE
QIENYKIAVQYLQSDPNPAHVMMKVKSAAAFLNNREKYDKEFTRFIQGKISYSQLITFLE
SERVEKTDKMKVRDEEKNINDSNFATENFNSSSSDSPETEISDDLRPCMAKPEIPNEIIS
DTPAEKKTENLAQVDSEYSSSDSSEVESNHSDNTSIASSKSLEEETEFYSCALKDTKSSQ
RRKFVPIQTNNFTYDDQPRDFGGRGDHRIFKPVANENRNKGYSKLESGRRSDDKISDNVM
QELDRWFEELRSRTNQIHMEEYCRGMLKYNY
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgttacgtcaaatggcgcaccaagtagattcaaaatctcggacgaatgacataaaaatc
agtgaagatgttacgttttttcaaatgggtctaagttcaaaagtttttgatggtttgaca
aactctggcttccaaagaccctccccgattcagctaaaggcaataccacttggacgttgt
ggattcgatctaataatgcgagcaaaatccggaactggtaagacggcagtgtttgggatc
attgctctggagatgctagatttgcaggtgaaaggcatacaagttctgatcctggcacca
acaagagaaatagcattacaggtgtctgaagtcttgactaccattggctctcaattaaca
gggttgaaagtggagtctttcattggcggattatccattgaagatgatcgaaaacgtgtc
aaccattgtcacatcgcagttggtgcacctgggagagtaagacatttgatggacaagggg
attttaaaaatcaacagtgttagattatttgttttagatgaagctgacaaattaatggag
accagttttcaaaaagacataaattatatattctcaaagcttccagtgaacaagcaagtc
atatcttcaagtgctacttatcccggtgatttggagaattttcttggaaaatatatgcgc
tcaccggttttgacatctccaaacaatgatgggccagttcttattggcctgcggcaattt
gttgtcgtagttaagcatcatccgaatgctatgagacaggtccaaatcaaggtagaggag
ctacttaaaattttcaccaaaataccgttcaagcagagcattatattttccaattatcaa
tccagagcacagtcggtgtgtagcaagataaatgcgatgggtttttctgcaatatacatt
gtggggaaccagctaatgcagaaacgaatagaaggattcaaaaaattgaaggattttaaa
tgcagaataatggtaacaacagatctaacagcaagaggaattgacgccgaaaatgtgaac
ctagtcattaacttagatgtgcccctagacggtgcaacatacctgcatagaattggcaga
gctggaagatacggatctcatggaattgctgtgactattgtttctgaagatgagattgaa
aactttagggaattgttagcttctgttggtggaacagaattttctattctgaaacttcct
cagaactaccctgatgatatttggaatgaaaatgactgtgtttttgagagaattcatgct
aaaagtgacaaggatgataaagaaaccgaaattattaatgatagtgtcgctaaatcccaa
catggtattccattgatcccaaaaaatgtgtctcacatcgaaactagttctttacccgca
gctaatatagaagtcactgagactggggctacatcgaatagtctttggacgaattcgaga
tataccaggaactctatcaaattggattctctatttaaaattgaagaaactttaggtttc
gatgatcagaaaactattgactcccagtttagggcaaaacagactataacggatctgaaa
gaggagtcaagtcaagtgcacaaatttaaagcaaaggcgagtggcacagagaacccttca
acaatgcaaaaattgaacaaagatattacgtttcaagtaaatctttctggtttgtctgag
gaaaatgacgattgcaacttagcacaggaggctgttgttgaatgcttaagatcaggacct
cggaaaatgtcagaagtaaaagaagtgctaaaaacgcaagaagacagagttcctgataaa
tttaatgccgaaagcatgatagagctactagaaaatgcttttgaacaattgcaaacacag
aataatataaacagagaaacggatgtggaaaaaacattaaagctgcaggatatcctgcga
gatttgaaaaacttgctctctagcgggaaaagcgaggattctataaattttgataaagtt
tatttaacactcaaagaggtaagtcggtggagagagcgactcgattttgaaattggctgg
ttgaaagcagccttggatattcctcacggttgggcatcaaataagtggcaccgacttgta
tataaagagcattactctgccatgatgacttttctagaaatgcaaaagcaggcactttta
ttggtataccctgatattcaaactgaagacgacgactgtcctcctgtgccgatagagata
ttccgagaggttgatgagtttgccaaaacgcatcgaatagtcagaaaacacctgaatacg
tattttccttatccaacgtgtcttgaggagaccctaccacaactagtgtttactaacgaa
caaatcgagaactataagatcgcggtgcaatatctgcagtctgatccaaatcccgcgcat
gttatgatgaaagttaaatcagctgcagcatttttgaacaatagagaaaaatacgataag
gaattcacgcgctttattcaaggaaaaatctcgtattctcagcttatcactttcctcgag
agtgaaagggttgaaaaaacagataaaatgaaggtccgcgacgaagaaaaaaatataaat
gattctaacttcgcaaccgaaaactttaattcgtctagtagcgactctcccgagacagag
atttccgatgaccttagaccgtgcatggcgaagcccgaaattccaaatgaaataatcagc
gatacccccgctgagaaaaaaaccgaaaacctagcacaggttgattcggaatattctagc
agcgattcctcagaggttgaatcgaaccattctgataatacatcgatagcaagttcaaaa
agtctggaagaagagaccgagttttatagctgtgccttgaaggatacgaaatcatcgcag
cgacgaaaatttgtaccgattcaaacaaacaattttacatacgatgatcagcccagagat
ttcggaggtagaggggatcataggattttcaaaccagttgctaatgaaaatcgtaataaa
gggtattcgaaattggaatcaggaagaagatctgacgataaaattagtgataatgtcatg
caagagcttgatagatggtttgaggaactcagatcgcggacaaaccagattcatatggaa
gaatattgcagaggaatgttaaagtacaattattga
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