Athalia rosae (coleseed sawfly): 105690700
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Entry
105690700 CDS
T09776
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35 isoform X1
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
aroa
Athalia rosae (coleseed sawfly)
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aroa03041
]
105690700
Enzymes [BR:
aroa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105690700
Spliceosome [BR:
aroa03041
]
Complex C
Other components
Complex C specific factors
105690700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
ABC_tran
Cas3-like_C_2
AAA_7
nSTAND3
Motif
Other DBs
NCBI-GeneID:
105690700
NCBI-ProteinID:
XP_012264157
LinkDB
All DBs
Position
6:1711746..1722426
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AA seq
684 aa
AA seq
DB search
MDIRPRFLKPGENTWEEDKTDIDTNSGTQFVYNAHRSLAINLQRQRLPIFRNRSHIIYLL
ENYQTLVLVGETGCGKSTQVPQYLLEAGWTADGKVIGVTEPRRVAATSLASRVADEQNCI
LGTVVGYSIRFDDCTDENTKIKFMTEGILLREMMGDPLLTNYCVIILDEVHERTLLTDIV
MGLLKKIIRKRRSLKVIVSSATVDAEQLRDFFNTNTTKDTSKDSATIISVEGRLYPVDTY
YIQEPVADYVKAVVDTALKIHEEEERGDILAFLTGMEEVDRAVSLLNEHGKLIKDTKQKI
LPLAMYGSLPNSEQLKVFWSAPKDTRKVVVATNIAETSITIPGVVYVIDSGFAKIRWFEV
ETHTDSLIIAPVSKASANQRAGRAGRVRSGKTYRLYTEEAYDKFFEATPPEMQRSDLAPA
ILQLKALGIDNVLRFNFPSPPPTKSLLSALELLYALGAIDDNGELTSPLGVTMAEMPLEP
VYAKCLIISGEMGCSEEITTILAMLQVQNVFTIPGGGQAALKARVARRKFEAEEGDLITL
LNVYTAYETQKTTSWCHQNFLNHKTLRRATEIRTQMRRMLSKLKIPLNSCQGDTEKILRC
ITAGLFPNAAYLHYTGVYRTVRGTRELHIHPNSCLYTVQQPQWIIFCEILQTNKTYMREV
TVVRPEWLEELAPHFYERRSIEPH
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggatatcaggccaagattcctcaaaccaggtgaaaatacctgggaagaggacaagact
gacatagatacaaattctggaacacagtttgtctacaatgcgcatcgttccttagcaata
aatcttcagcgtcaacggttaccaatattcagaaacaggagccacataatatatttattg
gaaaattatcaaaccttggtcctcgtcggtgaaactggctgtggcaaaagcactcaagtt
cctcagtatctcttggaggcgggatggactgccgatggaaaggtgatcggtgtcacagaa
cccagaagagtagcagcaacttcattggccagtcgggttgcggatgaacagaattgcata
cttggtactgtcgttggatactccataagattcgacgattgtacagatgagaatactaaa
atcaaattcatgacggagggtattctacttcgtgaaatgatgggtgatcctctgttgaca
aattactgtgtaattatactggacgaagtacacgagagaactttactgactgatatcgtg
atgggattgttgaaaaaaataatcaggaaacgacgtagtttgaaggtcatagtttcttca
gctacggtggacgccgaacaacttcgtgacttcttcaatacaaataccaccaaggatacc
tctaaggactcggcgacaataatcagcgtcgaaggacgactctatcctgtcgacacttac
tacatacaggaaccggttgccgattacgttaaggcagtcgtcgacacggcattaaaaatt
cacgaggaggaagaacgcggtgatattttagcatttcttaccggaatggaggaagtggac
agagcagtttccttgctaaacgaacacggaaaattaattaaggatacaaaacagaaaata
ttgccgctcgctatgtatggatcgcttccaaattctgaacagttaaaagtattttggagc
gctcccaaggatacccggaaggttgtagtcgcgacgaacatagccgagacttcgattacg
atacccggtgttgtctacgtaatagacagtggatttgcaaagatccgatggtttgaagtt
gaaacgcacacggatagcttgattatagctcccgtttcaaaagcctccgctaatcaacgt
gccggacgtgctggtcgtgtacgatcagggaaaacctacaggctgtacacagaagaggcc
tatgataaattttttgaagcaacacctccggaaatgcaaagatcagatcttgcgccagct
atacttcagctcaaggctttaggcatcgacaacgtattaagattcaattttccttccccg
ccaccgactaaaagtcttctatccgcccttgaattactttacgcactgggagctatcgat
gataacggcgaactgacctctccgcttggagtaacgatggcagaaatgccattagagccc
gtctatgcgaaatgtctcattatctcaggtgaaatgggctgttcggaagagataacaact
atcctagctatgctccaagtacagaacgtttttactatacccggaggtggccaggcagca
ttgaaggctcgtgtagcacgtcgcaagttcgaggcagaagaaggagacttgataacttta
ttgaacgtctacacagcttatgagacgcaaaagacaaccagttggtgtcatcagaatttt
ctaaaccataaaacccttcgaagagctacggaaatcagaactcagatgcgtcgaatgctt
tcgaaattaaaaattcctctcaactcttgccaaggtgacactgaaaaaatcttgagatgc
attaccgcaggcctattccctaacgcagcttatctccattataccggggtttataggact
gtgagaggaaccagagaacttcacatacatcccaacagttgcttgtacacagttcaacaa
ccgcaatggatcatcttctgtgagatattgcagaccaataaaacatacatgagggaggtg
accgtcgtaagaccagaatggttagaagaattggctcctcatttctatgagaggcggtca
atcgagccacattga
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