Athalia rosae (coleseed sawfly): 105690713
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Entry
105690713 CDS
T09776
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
aroa
Athalia rosae (coleseed sawfly)
Pathway
aroa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
105690713
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aroa03400
]
105690713
DNA repair and recombination proteins [BR:
aroa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
105690713
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
FeS
AAA_27
Motif
Other DBs
NCBI-GeneID:
105690713
NCBI-ProteinID:
XP_012264178
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Position
6:1635462..1651529
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AA seq
922 aa
AA seq
DB search
MAVQPNQQFTMDNATQQSFIRFFKNLPEKPSTTIRFFNRTDYYTLHGSDALFAAKEIFKT
TSVCKILGAEPYKTEGLILSKSNFESFIRDLLLVKQYRVEVFVNQGSAKNQDWILEYKGS
PGNLAQFEEILFSNNDIAVGTSVIAIKLGGEAKKRIVGVSCVDVVERLISVCEFSDDDLF
SNLEALVISFGPKECLLIQGEGSTEFNTLKQIMERSNVMVTLRKKSDFSTDSIVQDMNTL
LRFKKGQQRNAQTLVEMNLKVAMAGTAAIIKYLELTSDEGNVNQFEVKQLEQSRFVRLDA
AAVRALNIEPRGDAPSVSNTGAPNCILNLLDRCRTPQGHRLIAQWVRQPLRDIALIKERH
DIVEALVKDNELRTSLMEDHLRRIPDCQQLAKKLAKNKATLQDCCRIHSCVSVLPVLAER
LSNSQCGAAMTAMIIDPLRELASDMDKYQQMVEQTIDLDAAEKGDYMVKPEFDKELQELK
LKMTEMEEEIQSQINKVAQDLSLDAGKTLKIESNQQIGYYFRITLKEEKALRNKKGYTTI
DSNKAGVRFTNQKLTNLNEEFISVRDQYFQQQKSVVAEIIKIAAGYTGPIHSIGSVSARL
DVLTAFALASANAPKAYVRPNICPSENGELSLIQARHPCMELQEGVDFIANDVNFKRGEC
TVNIITGPNMGGKSTYIRTTGVVALLAHIGCFVPCEKATISILDCILARVGADDSPTKGL
STFMTEMIETAAILRTATCDSLVIIDELGRGTSTYEGCGIAWAIADHLARELKPYCLFAT
HFHEITRLADDVPTVKNMHVTAIVGDNKLTLLYRVKPGVCDQSFGIHVAKMANFPHDIVK
VAEKKLRELENDQKVDFEGSKNPESKRKIIQDGEKLISEFSAKCKALDLSSPESEIASKI
QEYKSEVLSHNNPYINALLSVS
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggctgttcaacctaatcaacaatttaccatggataatgcaactcagcagagctttatc
aggttcttcaaaaatctcccagagaaaccatccactacaataaggttcttcaatagaaca
gattactacacattacatggaagcgatgctttgttcgcggctaaagagatcttcaaaaca
acttcagtttgtaaaattcttggtgctgagccatacaagacggaaggattgatattgagc
aaatccaattttgagtcatttatccgggatctgctgttagttaaacagtacagagtggaa
gtattcgttaatcaaggatctgccaaaaatcaagattggatcctggaatacaaaggttca
ccaggaaatttggcacaattcgaggagattttattcagtaacaatgacattgctgttggc
acctccgtcattgctataaaactcggaggggaggcaaaaaaaaggatcgttggagtgagc
tgtgtggatgtggtagaacgtttgatctctgtgtgtgaattttctgacgatgatttattc
tcaaatttagaggcgctcgtaatttcctttgggcctaaggaatgcttgttaattcaagga
gaaggaagtacggaattcaatactttgaaacagataatggagcgaagtaatgtcatggtt
acactgagaaagaaaagtgatttctcaaccgattcaattgttcaagatatgaatacactc
ctccgcttcaaaaagggtcagcaaagaaatgcccagacacttgtcgaaatgaacttaaaa
gttgctatggcaggtactgcagcgattatcaaatatcttgaacttacttcggacgaagga
aacgtaaatcagttcgaggtgaaacaattagaacagtcccgtttcgtcagattagatgcg
gctgcggtgcgagcgctgaatattgagccacgcggcgacgctccgtcagtgtcgaatacc
ggcgctccgaattgtattttgaatctgctggatcgatgccgtacacctcaaggtcatcga
ctgatcgcacaatgggtgagacaaccgctacgagatatcgcactaattaaggagcgtcat
gatattgttgaagcattggtaaaggataacgaattacgaacttctttaatggaagatcat
ctgaggcgtataccagattgtcaacaacttgccaaaaagttggcaaagaataaagcaaca
ttgcaagactgttgcaggatccattcctgcgtatcagtgttgccagtgctcgccgaacga
ttatcgaactcacaatgtggagcagcgatgactgccatgataatagatcctttgagagag
cttgcttctgatatggataagtatcaacaaatggttgaacagaccatcgacttggatgct
gcagagaaaggtgattacatggtgaaaccagagttcgataaagagttgcaagagctcaaa
ttgaaaatgacagaaatggaagaagagatacagtcccaaattaataaagtggcgcaagac
ctatcgctcgatgcgggaaagacactcaaaatagaatcaaaccaacagattggatactac
tttagaataacattaaaagaagaaaaggctttgagaaataagaaggggtacacgaccata
gattccaacaaagccggggtcagattcaccaaccagaaactcacaaacctcaacgaagaa
tttattagcgttagagaccagtacttccaacaacaaaagtctgtcgttgcagagattatt
aaaatagcagctggatacacggggccaattcattcgatcggatctgtatcagctagacta
gacgtccttaccgcgtttgctttagcatcggcaaatgctccaaaggcttacgtacgtccg
aatatttgcccgagcgaaaatggtgaattatctttaattcaagcaagacacccgtgcatg
gaactccaggagggagtagatttcatagctaatgacgtgaatttcaagagaggtgaatgc
acggtcaatataataacgggtccgaatatgggcggaaaaagtacgtacataagaaccacg
ggagttgttgctctgttggctcatatcgggtgttttgtaccatgcgaaaaggctacgatt
tcaatactcgactgtattttggccagagtcggagccgatgattctccaaccaaaggactc
tcgacattcatgactgagatgattgaaacagcagccattttaaggaccgcgacttgcgac
tctctcgtaataatagatgaacttggtcggggaacttcaacttacgagggttgtggaata
gcttgggctatagcggatcatttagctagggaactcaagccttattgcctcttcgctaca
catttccacgaaattactagactagccgacgatgtacctactgtgaaaaatatgcacgtc
acagcaattgttggggacaataaactcaccctactttatagagttaagccaggagtttgc
gatcaaagttttggaatacacgttgctaagatggcgaattttccacatgatattgttaag
gttgctgaaaagaaactaagagagttggaaaatgatcagaaagtagattttgaaggttcc
aaaaatccagagagcaaaagaaaaataatacaagacggcgaaaagctgatctctgaattt
tcagccaaatgcaaagcgctggatttgtcgtcaccagagtctgaaatagcgagcaaaatt
caggagtacaaaagcgaagttctttctcacaacaacccttacataaacgccttgttatca
gtgtcataa
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