Athalia rosae (coleseed sawfly): 105690844
Help
Entry
105690844 CDS
T09776
Name
(RefSeq) probable ATP-dependent RNA helicase pitchoune
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
aroa
Athalia rosae (coleseed sawfly)
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aroa03041
]
105690844
03009 Ribosome biogenesis [BR:
aroa03009
]
105690844
Enzymes [BR:
aroa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105690844
Spliceosome [BR:
aroa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
105690844
Ribosome biogenesis [BR:
aroa03009
]
Eukaryotic type
90S particles
Helicases
105690844
Pre-60S particles
105690844
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
AAA_22
AAA_30
C45G9_6_C
Motif
Other DBs
NCBI-GeneID:
105690844
NCBI-ProteinID:
XP_012264391
LinkDB
All DBs
Position
6:complement(12794219..12800250)
Genome browser
AA seq
612 aa
AA seq
DB search
MAPKGSVRRSAPSKPAVPKQSDQGDMEENLDDTVELIENGHGVKRQLPADVTAKKKKKKS
KKAKLEEDLEHEHENEEDSGPQELEEKSTLCDVTKILPGSAMGLEIMNNTAFSSLQDKVC
ENTLKAIADMGFTNMTEIQARSIPALLEGRDLVGAAKTGSGKTLAFLVPAVELIYKLKFM
PRNGTGCVVISPTRELSMQTFGVLKELMKYHHHTYGLLMGGANRKTEADKLSKGINIVVA
TPGRLLDHLQNTPDFLYKNLQCLIIDEADRILDIGFEEELKQIINILPKRRQTMLFSATQ
SKKTEALTTLALKKEPIYVGVDDEKEKATVEGLEQGYVVCPSEKRFLLLFTFLKKNRKKK
VMVFFSSCMSVKYHHELLNYIDLPVMSIHGKQKQTKRTTTFFQFCNATSGILLCTDVAAR
GLDIPDVDWIVQFDPPDDPKEYIHRVGRTARGEGSSGHALMVLRPEELGFLRYLKQARIP
VNEFDFSWNKIADIQLQLEKLVSKNYFLNTSAKEAFKAYVRAYDSHHLKQIFDVETLDLA
KVAKSFGFVVPPAVDLKVGISKDSRPRKRQGGGGYGHFKNLNANPSGRRQVDRSKTFRQS
GNRGKDRRQFAR
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccaagggtagcgtgcgaagatcagctcccagtaaacctgctgtccctaaacaa
tctgaccaaggtgatatggaagaaaacttagatgatactgtagaattgattgaaaatggg
catggagtaaaacgtcaacttccggcagatgtcacagctaagaaaaaaaagaaaaaatcc
aagaaggccaaacttgaggaagatcttgaacatgaacatgaaaatgaagaagacagtggg
cctcaggaattagaagaaaaatccacactgtgtgatgtaactaaaatattgccaggatct
gctatgggcttggagataatgaacaacacggccttttcatctctccaagacaaggtatgc
gaaaacaccttgaaagcaattgcagatatgggtttcactaacatgactgaaatccaagca
cgttcaatacctgccctacttgaaggacgtgaccttgttggggctgccaaaacagggtca
ggaaaaactttagcatttctcgtcccagctgtcgaactcatctacaaattgaagttcatg
ccacgcaatggtaccggctgtgtcgtgatatcccccacacgagagttgtccatgcaaaca
tttggtgttcttaaagagcttatgaaatatcatcatcatacatatggcctgttaatgggt
ggtgcaaatagaaaaactgaggccgataaactttccaagggtattaatattgtcgtggca
acgcctggtcgactattggatcatttgcaaaatacccccgacttcctatataaaaatcta
caatgtttaataattgacgaagccgatcgtatattggatattggttttgaagaagaattg
aagcagataatcaacattttacccaagcgacgacaaacgatgctgttcagtgcaacacag
tcaaagaaaaccgaagcattaacgacgctcgctttgaagaaagagccgatatatgtgggt
gtagatgatgaaaaagaaaaggcaactgtagaaggtttagaacaaggctacgtagtatgc
ccaagtgagaaacgttttctacttttattcacattcctgaaaaaaaatcgcaagaagaag
gtcatggtgttcttcagttcctgtatgtccgtaaaatatcaccacgaacttttgaattac
attgatctgccagtaatgagcattcacgggaaacaaaagcaaactaaacggacgacaacg
tttttccaattctgcaatgccacatctggtattcttctctgcaccgacgtagctgctcga
ggtcttgacatccccgatgttgattggattgtgcagttcgatccaccagatgatcccaag
gaatacattcatagagttggccgaacagctcgcggagaaggcagcagcggacacgctctg
atggttcttcgtccagaagaattgggattccttcgttacctgaaacaagcccgtatccca
gtgaatgagttcgatttctcatggaacaagatcgctgacatacagttacaactagaaaaa
ttggtgtcaaagaactactttttgaacacttccgcgaaggaggcattcaaagcttacgta
cgggcgtacgattcgcatcacctcaagcaaatctttgatgtcgagaccctggatctagca
aaagttgcgaaatcctttgggtttgtggtaccgccagctgtcgacctgaaagttggaatc
agcaaggattcaagaccgagaaaacgtcaaggcggtggtggttacggacactttaaaaat
ctgaacgctaacccgagtggtcggcgacaagttgatcgttcaaaaacgttcaggcaatct
ggaaataggggaaaggatcgccgtcaattcgcgagatag
DBGET
integrated database retrieval system
