Athalia rosae (coleseed sawfly): 105691099
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Entry
105691099 CDS
T09776
Name
(RefSeq) regulator of nonsense transcripts 2 isoform X1
KO
K14327
regulator of nonsense transcripts 2
Organism
aroa
Athalia rosae (coleseed sawfly)
Pathway
aroa03013
Nucleocytoplasmic transport
aroa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105691099
03015 mRNA surveillance pathway
105691099
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aroa03019
]
105691099
Messenger RNA biogenesis [BR:
aroa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
105691099
mRNA cycle factors
P-body specific factors
105691099
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
OrfB_IS605
Motif
Other DBs
NCBI-GeneID:
105691099
NCBI-ProteinID:
XP_012264786
LinkDB
All DBs
Position
7:complement(9647873..9652317)
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AA seq
1188 aa
AA seq
DB search
MSEVDNDSQEVESEPTIASSSDKAVLLEYVSEAEKRFATKEEIRLANLNVTRPPDSYFSK
LDSSLKKNTTFVKKLKNFCSPQVDTVLKDATNLNLTKYISEVATALVEAKLKMTDVGPAI
KVCCYLNQNYAEFASHLFENWQRILSLKVTDKIPNPSKLRVDLRFYAELVNAGIFTHKQG
LPLLGSVLTVLINMDKEEHNNVTIILSFCRHCGEDYAGLLPRRIRELSDMWPDVTLPRSR
LLSADKQQNVRTLLRDYYNSLCKHLLKEHKELQAFEKQNRKILQTRGELSSERREKLEAL
QVSYDRLLSGVQNFAETLDEPMPELPIDTEVKTETEESLKMTSEGEENGVTTEDMWGDEE
TKRFYQVFPDLTVFLPGSYPKEAPTPKPEEDQLTEEALDEELVLEELEETENKVVDEPEV
EVEETHVSNISNKILLDAYLTYLPNCVNREMIDNAAVEFLMNLNTKHNRKKLIKALFGVS
RIRLDLLPFYSRLVGILFPVMPDVANDLCMMLKQDFKYHVRKKDQINIESKIKVVRYIGE
LVKFKLYSKIEALYCLKVLLHDFTHHHVEMACNLLETCGRFLFCSPDSHQRTKVYLEQMM
RKKAVTALDSRYVTIIENAYYFVNPPESTGGIAKKERPPMHEFIRKLLYQDLSKANTDKV
LRLMRKLDWDNDEIMTYAVKCLVAAHNVKYLNIRCVGSLLAGLVAHYEAVGPHVVDGVLE
DIRLCMEINLPKYNQRRIAMVKYLGELYNYRLVESGDIFRTLYLLITFGVATDHTAPPTI
LDPPDHLFRIRLVCTLLETCGQYFSGGSSKKKLEYFLIFFQHYYWFKRSDPIWTAPENPF
PIGIDYMYCDTLTMLRPKMQLFQSFKEARCAVDELRNTLYPSLAGGTPTEDYASEQGKAG
QKPGSEDSWSIAEQPEEESESGMGVIPEVDEDLPTGAPVVPLVPIAQGNGSGDAKSMGEL
HFDESEEYSEAQSEDEWGTEGYREGGNPGTQENTQGELSLSAGVAEGVVMDSADMDAALS
LAPRRVACPEDDDFLSALDKMVSDNIQDRMRDSVKPQQVDISVPLHVKSTKKTYEQLCEG
PSDSTTVDFVLMLRKGNKQQYKSLAVPVSSELAMNLRNREQEQKEEKERVKRLTLNITER
QEEEDYQETINQGTRPVTVNLNRERRQKYNHPKGAPDADLIFGPKKIR
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaggttgacaatgattcccaagaggttgaatctgaaccaacgattgcctcttca
tcggacaaggctgtcctgctggaatatgttagtgaggcagagaaacgttttgcaaccaag
gaagaaattcgtctggcaaatctcaatgtcaccagacctcctgactcatatttcagcaaa
ttggattccagcctgaaaaagaacacaacgtttgtgaaaaaactcaagaacttttgctca
cctcaggtcgatacagtccttaaggatgcaaccaacttaaatttaaccaaatacataagc
gaggtagcaactgctttggttgaggcaaaactgaaaatgacagacgtcgggcctgcaata
aaagtatgttgctacctgaaccaaaactatgccgagtttgcatctcatctatttgaaaac
tggcaaaggatactaagcctcaaggtaaccgacaagatcccaaatccaagtaagctcaga
gtagatttgaggttttatgcagagctggtaaatgcgggaatattcacccacaaacagggg
ttgccacttcttggcagcgtgctcacagttctcataaatatggataaagaagagcacaac
aatgtgacgataatactgagcttttgtcgccactgtggcgaggactatgcaggtctgttg
cccagaaggataagagagttatcagacatgtggcccgatgtgaccttgccaagaagcagg
ttgctctccgcagataagcagcaaaatgtcagaacactattacgagactactataactcg
ctatgtaagcatctgctcaaggagcacaaggagctgcaggcctttgagaaacaaaatcga
aagatactgcagacacgaggtgagcttagttctgaaaggagagagaaattagaagctcta
caggtatcttacgaccgattgttgagtggggttcaaaattttgccgaaacgttagatgaa
cctatgccagaactgcctattgacacagaagtaaaaacagagacagaggaatctttgaaa
atgacgagtgaaggagaagaaaatggtgtgactactgaagatatgtggggggatgaagag
actaaaagattttatcaggtttttcctgatctcaccgtttttcttcctggctcatatccc
aaagaggctccgaccccaaaaccagaggaagaccaactgacagaggaagctcttgatgaa
gaattagttttggaggaattggaagagacagaaaacaaagttgtggatgagccagaggtt
gaagttgaggagactcatgtctcaaatataagtaataaaattttactggatgcatatctt
acgtacctgcccaactgtgtaaacagggaaatgattgacaacgcagctgtcgagttttta
atgaatctcaacaccaagcacaacaggaagaaactgataaaagcattgtttggcgtctcc
aggatccgtctggacctcttgcccttttattcccgtttggtcggcattctcttccccgtt
atgcctgatgtcgcaaacgacctgtgcatgatgctaaaacaggactttaaatatcacgtt
cgtaaaaaggatcagataaacattgagtcaaagataaaagtagtacgttacatcggtgag
cttgttaagttcaaactctactccaagattgaggcactttattgcctaaaagtcttgctg
cacgatttcactcaccaccacgttgagatggcttgcaatctgcttgagacatgtggcaga
tttttgttctgttcacccgactctcatcaacggactaaagtataccttgagcagatgatg
cggaaaaaagccgtgaccgcccttgactcacgttatgtgaccataatcgagaatgcatac
tactttgtcaatcccccagagtcaactggaggcatagccaaaaaagaacgacccccgatg
catgagtttataaggaagctactctaccaggatctctctaaagccaatacggacaaagtt
cttaggctaatgcgcaagttagattgggacaatgacgaaattatgacatatgcggtgaag
tgtcttgtagccgcgcataatgtaaaatatctgaatatcaggtgtgtaggaagtttactt
gctgggcttgtagcccattacgaggcggtgggcccacacgtcgtagatggcgttctagag
gacattaggctttgcatggaaataaatctgcccaaatacaaccagcggaggatagcaatg
gtaaaatacctaggggagctgtataactatcggctcgttgaaagtggcgatatatttcgt
acgctgtacctcctcataacgtttggagtagccacagaccacacagccccaccaactatc
ctcgatcccccagatcatttattcaggataaggctggtttgcactcttcttgagacctgt
gggcagtactttagcggaggttccagcaaaaagaaattggagtatttcctaattttcttc
caacattattactggtttaagcgcagtgatcccatctggaccgctccagaaaatccattc
cccattggaatcgattacatgtactgtgatacgttgacaatgcttagaccaaagatgcag
ctcttccaaagcttcaaagaggctcgttgcgctgtagatgaactgaggaacactctttac
cctagcttagcaggtggaacacctactgaagattacgccagtgaacagggaaaagctggc
caaaaacctggttccgaagattcatggtccattgcagagcagcctgaggaagaaagcgaa
tcagggatgggagtgattcctgaggttgacgaggatttgccaacaggagcaccggtagtc
ccattagttccaattgcccagggcaacggaagcggggatgccaagtcgatgggagaattg
cacttcgatgaaagcgaggaatactcggaagcacaatctgaagatgagtggggtacagag
ggatacagagaaggtggaaatccaggtacccaggaaaatactcagggtgagttaagccta
tctgcaggggtggcagaaggcgttgtgatggattctgctgatatggatgcagccttgtca
ctggcacccagaagagtagcttgtcctgaggatgacgacttcttgtcggcactcgataaa
atggtctctgataatattcaagacagaatgagagactcagtgaaacctcagcaggttgat
atatccgtacctctccacgtaaaaagcaccaaaaaaacttacgagcagctttgtgagggt
ccctcggacagcacaaccgttgatttcgttcttatgctgcggaaaggcaataaacaacaa
tacaaaagtctcgccgttccggtttcttcagaattagctatgaatctgagaaaccgagaa
caggagcagaaagaggaaaaagaaagagtcaagagattgacgttgaatatcacagaacgc
caggaggaagaggattatcaggagacgatcaatcagggaactagacctgtcactgtcaat
ctcaacagggagcgccgacagaagtataaccatccaaaaggcgcgcctgatgccgatctt
atatttggaccaaagaagatccggtga
DBGET
integrated database retrieval system
