KEGG   Athalia rosae (coleseed sawfly): 105691305
Entry
105691305         CDS       T09776                                 
Name
(RefSeq) gem-associated protein 5 isoform X2
  KO
K13133  gem associated protein 5
Organism
aroa  Athalia rosae (coleseed sawfly)
Brite
KEGG Orthology (KO) [BR:aroa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aroa03019]
    105691305
   03041 Spliceosome [BR:aroa03041]
    105691305
Messenger RNA biogenesis [BR:aroa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     105691305
   mRNA cycle factors
    P-body specific factors
     105691305
Spliceosome [BR:aroa03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   SMN complex factors
    105691305
SSDB
Motif
Pfam: TPR_GEMI5 Beta-prop_RIG_2nd Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_CDC20-Fz Beta-prop_WDR3_1st Beta-prop_EML_2 Beta-prop_WDR5 WD40_Prp19 WD40 Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 WD40_WDHD1_1st WDR55 DSE1_N Beta-prop_RIG_1st Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_TEP1_2nd Beta-prop_WDR19_1st PAC11 Beta-prop_WDR3_2nd EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_EML WD40_RFWD3 Beta-prop_EIPR1 Beta-prop_Aladin WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_NUP159_NUP214 ASA1 WDR90_beta-prop_4th WD40_Gbeta Beta-prop_VPS8 Beta-prop_TEP1_C NBCH_WD40 PEP5_VPS11_N Beta-prop_Vps41 TPR_IFT122
Other DBs
NCBI-GeneID: 105691305
NCBI-ProteinID: XP_012265129
LinkDB
Position
5
AA seq 1350 aa
MNEATLPPSPNWYLGNILACAKDGTVAWGARNAIVIAVSEQDKKTLNYSILPDAHIDRVT
SLAFSPRFGEPDQSLLVSGGDENVVRIWDLCSKSAVMAHYYAEIHQKVVGVDWSKADPNI
VCCISTDGFLVIWNIALNIAHQISLGKLTATCILCCPHDPDLVAIGTKSGLIYIVNIHGN
GKIVYKLRGHDTEITSLSWCPVDTNIITGTDTKDLLLASGGKDRSIFIWRAGSDGRYQIE
LTLPNMPLNSHQHRSKMGWNTGNWTAVCWITPKLLLSSLSWGELISWDLTANSKSKPVCK
LIHGYHVRGPSCIAGLQTATGAEQSNWRSKDSQSITVWTLAQDRWVVCCTIKGTDVKMTY
NIPTQGGYTYCIAPSPLDTSRVAFGVGDAMLRLWNLCEPHENTFDVTVLWQKIKGKIMAV
SWHPEKENIIAFGTSEGRVGVFDTNSPNKPPILYRNYHRHTLYALGWGPHPTRKTDHVLY
SCGDGELVYYDPEKPNGVPTSVIKKNCTEFAWKQDGSCLAVGFENGAVSFLNRNLVSWGS
VIYSLKRAVQRLVWHPESTATDLSLSPLRHQLAVATNSPTITILEFIEPAEDCSTIDGSD
KTADDKPSHKIVATLDGHSAKVVALAWNPHISGYLASASYDNRVQVWKIETKELVGTYTG
HYGPVHCCIWSPFDPDLIITGSADFTVRIWRLSKQKVMMPTENSVKPKKVRTKKKKTKAN
KTTDLTSDPEQITNGQDDNAIDVGNVGSAPTDKEIKRSLTTNQINRKKGKQATYFTVLTN
STGSKESKLKSVMEMVGISCQKSNIEQDLVTAEEANDVASSETQNKEISNGLSIFGSKEN
VLNLLEIEKSAHTKTGHYDTVVEMDLWSNNLKQSLQDATKRGQLNDFLVSLAPSLSFRVW
QEMCETYAKQLESEGNYRKAASYFLCIHKIERAIQVFVDAKMLREAYVLARCKLAESDPI
IDSLLETWAIHTTTKGQFEDAALCYIKLGNLKEAAKLLGRRNDIRSLEVATQLALKSGDD
EFGLELAERAVTEALLKADYTAAEQLIESFPQIQHCEVKVAALKEMDRIFQNCDNQSIWN
CLQGNATECILKNLSNQYSNCNKYYYAKLLKNSENLQISENERTVWVKICGQIALATVCV
ELEKKLHHLVTALEIIYRFEAAKHLQRGESETDSKEGQRNLMTKLLSQLNSILNIKSTGL
GKSLRAFWCYGVLNWLLDSDLQQAELEGKRELVASFIEDTIDDALDKQAVRHKVLSAEIN
KLEGLLVLNMGKLQKVGEMNGHSEKDIGNHMERLAEIRREKEKFHTERLYTPNPVMVYSK
AQEVISIVFEGEIEEKIKQLVTRAWTEATS
NT seq 4053 nt   +upstreamnt  +downstreamnt
atgaatgaagccactttacccccatcgccaaactggtatctaggaaacattttagcatgt
gctaaggatggaactgttgcctggggtgcaagaaatgcaatcgtaattgctgtctcagaa
caagacaaaaaaactttgaactattctattctaccagatgctcacattgatagagtaacg
tcactggctttttctccaaggtttggagaaccagatcaaagtctactagtgtctggtggc
gatgaaaatgttgttagaatttgggacttatgctcaaaaagcgcagtaatggctcattac
tatgcggagatacatcaaaaagttgtgggagtcgattggtcaaaagcagaccctaatata
gtatgctgcatcagcacagatggattcctagttatctggaatattgcccttaatattgca
caccaaatttccctgggtaagttgacggcgacctgtatattatgttgcccccacgatcca
gaccttgtagcaattggtacaaaaagtggactgatatacattgtcaacattcatggcaat
ggaaaaattgtctataaactgagaggccatgatactgaaatcaccagcctctcctggtgt
ccagtagatacaaatattatcactggaactgataccaaagatcttttactggcatcagga
ggcaaagacagatcaatattcatctggcgggctggcagtgatggtagatatcagatagaa
cttacattgccgaatatgcctctcaattcacatcagcacagaagtaaaatggggtggaac
actgggaattggacagctgtatgttggataacaccaaagttattactcagtagtttgtct
tggggtgaattaatatcatgggatctgacggcgaattcaaagtcaaaaccagtgtgtaag
ctaattcacggatatcatgtgagagggccttcttgtattgctggtcttcaaactgcaacg
ggagctgagcaaagtaattggagatccaaagattcccaaagcataactgtgtggactttg
gctcaagatcgttgggttgtttgctgcacaataaagggaaccgatgtaaaaatgacgtac
aatattcctactcaaggtggatatacgtactgcatagctccctctcccctagacacatct
agagttgcttttggtgtgggggatgcaatgctaagactttggaatttatgcgaacctcat
gaaaatactttcgatgttactgttctttggcaaaaaattaaaggaaaaattatggcggta
tcatggcatcctgaaaaggagaacataatagcctttggtacctcagaaggtcgtgtgggt
gtatttgatacaaactcacctaataaacccccaatcctgtatagaaactatcataggcac
actctatatgctcttggttggggtccacacccaacaagaaaaaccgatcatgtactgtat
tcttgcggtgatggagagttagtttattacgatcctgaaaaaccaaatggagtcccaaca
tctgtcataaaaaagaattgtacggaatttgcttggaaacaagatggctcatgtctagct
gttggtttcgaaaatggagcagtatcattcttgaaccgtaatctagtctcatggggatcg
gtaatttattcattgaaacgggctgtccagcgcctggtgtggcatccggagagcactgcg
accgacctgagtctttctcctctccgccatcaattagctgtagcaactaattcacccacg
atcactatattggagtttattgaaccagctgaggactgttctacaatagatggctcagac
aaaacagctgatgacaaaccctcgcataaaattgttgcgacattagatggacattccgca
aaagttgttgccttagcttggaatccacatatcagtggatatctggcgtcggcgagttat
gacaaccgggtacaagtttggaagatagaaacaaaggagttagttggaacgtatacaggt
cactacggtcctgtacattgttgcatttggagcccctttgatccagacttgattataaca
ggctcggcagatttcactgttaggatatggcggctctcaaaacaaaaagttatgatgcct
actgaaaattctgtgaaacccaaaaaagtgagaacgaaaaaaaaaaaaactaaggctaac
aagaccactgatctaaccagcgatcctgaacaaatcacgaacggacaggatgataacgcc
atagatgtaggaaacgtcggatccgcgccaaccgacaaagaaataaaaagaagcttgacg
acaaatcagatcaatcggaagaagggtaaacaagccacctactttacagtattaaccaac
tctacgggtagtaaggaatctaaacttaaatcggttatggagatggtaggaatctcgtgc
caaaaatccaatatagagcaggatctggtcaccgctgaagaagcgaacgatgtggctagc
agcgaaacccaaaataaggagatttcaaacggcctatccatatttggaagcaaggaaaac
gttttaaatctactggaaatcgaaaaatctgctcatacaaagacaggccattacgacaca
gttgtggaaatggatctgtggtctaataatttgaagcaaagtttgcaagatgctaccaaa
cgaggtcaactaaatgattttttagtttcactagcaccgagtctttcgtttagagtctgg
caggagatgtgcgaaacttatgccaagcaactcgagtcagagggaaactatcgtaaagcg
gcatcttactttttgtgcatccacaaaattgaacgtgcaattcaggtgtttgtggatgct
aagatgttaagggaagcttacgtattggcaagatgtaagcttgctgaatctgatccaata
atagatagtttattggagacatgggcaatccacacaactacgaaaggacagtttgaagat
gctgctctttgttacattaaactgggtaacctaaaggaagctgcaaagttattaggccgt
cggaatgacataagaagtctggaagtagctactcaactagcgttgaaatcaggggacgat
gaatttggattagaattggctgaaagagctgtaacagaggctctcttgaaggctgattat
actgcagcagaacaactaattgagtcttttccacaaattcagcactgcgaagtgaaagtt
gctgcactcaaggagatggacaggatttttcaaaattgcgacaaccaaagtatttggaat
tgtttgcaaggaaatgctacagaatgtatacttaaaaatttatcaaatcagtattccaac
tgcaacaagtattattatgccaaattgttgaaaaattcagagaacctgcagatctccgag
aatgagcgaacggtttgggttaagatttgtgggcaaatagctctagcgacggtatgcgtt
gaacttgaaaagaaactgcatcatttggtcaccgcattagaaatcatctataggtttgaa
gcagcaaagcatttgcagagaggggaatctgagacagattctaaagaaggacaaagaaat
cttatgacaaagttgctgtcacagttaaatagcatcttaaacataaaatcgacaggtctc
ggaaagagcttaagagccttctggtgttacggagtcttgaattggcttcttgattcggat
ctccaacaagcagaattggaaggtaaacgtgagcttgtcgcatcattcatagaggacaca
atcgacgatgccttggacaaacaagcagtcagacataaagttttatctgctgaaattaac
aaacttgaaggtttattggtcctcaatatgggaaagttgcaaaaagttggagaaatgaat
gggcactctgagaaagatattggaaatcacatggaacgacttgcagaaattcggcgtgag
aaagagaagttccataccgaacgtctctatactcctaatcctgtcatggtttacagtaaa
gcacaggaagtaataagtatcgtatttgaaggcgaaattgaagagaaaattaagcagctg
gtaactcgtgcttggacagaggcaacgtcttaa

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