Athalia rosae (coleseed sawfly): 105691441
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Entry
105691441 CDS
T09776
Name
(RefSeq) ATP-dependent RNA helicase Ddx1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
aroa
Athalia rosae (coleseed sawfly)
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aroa03041
]
105691441
03016 Transfer RNA biogenesis [BR:
aroa03016
]
105691441
Enzymes [BR:
aroa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105691441
Spliceosome [BR:
aroa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
105691441
Transfer RNA biogenesis [BR:
aroa03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
105691441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
CMS1
ResIII
Cas3-like_C_2
Band_7_1
AroM
Motif
Other DBs
NCBI-GeneID:
105691441
NCBI-ProteinID:
XP_048507320
LinkDB
All DBs
Position
2:1395420..1399270
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AA seq
737 aa
AA seq
DB search
MTAFEEMGVLPEIAKAVEDMEWTLPTDVQAEAVPLILGGGDVLMAAETGSGKTGAFCLPI
LQTVWETLKDLESGKTKTSQINALSSPHWSMSLFDRGSALAVTPDGLRCQSREQREWHGC
RATKGVQGTGKFYYEATVTDEGLCRVGWSSQDASLDLGTDRFGFGFGGTGKKSNARQFDD
YGEPFGMHDVIGCLLDLTKGEIRFTKNGIDLGQAFALSAQQKLLTFYPAVVLKNAEMAFN
FGAQPFKHQPPEGFIAVSTAPKGYIRDNVVSGSRSTTDNLKPSNNAPQAIIIEPSRELAE
QTFNQIQKFKKHLKDPVVRELLVIGGVNVKDQISVLNTGVHIVVGTPGRLEDLIQGGYMS
LTQCRFFVLDEADGLLKQGYTELIDRLHRQIPKITCDGRRLQMIVCSATLHAFEVKKLAE
RLMHFPTWVDLKGEDAVPETVHHVVVMVDPQKDKSWYTSKWHVQTDGVHSRDNVQPGNNT
AETLSEAVKILKGEYCVRAIKEHKMDRALIFCRTKLDCDNLEKYLKSVGGAEFSCVCLHG
DRNPQERKANLAKFKQQEVKFLICTDVAARGLDITGLPFMINITLPDEKSNYVHRIGRVG
RAERMGLAISLVGSVPEKVWYHGSWCSSRGTRCSNVNLTDQGGCCIWYNEIKYLGEIEDH
LNVTIQQVEPDIKIPVNEFDGKVIYGEKKVAVGSDYKNHVTQMAPIVSQLATLESQAQLM
YLKRQLNNNKQFLTTRA
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgacggcgttcgaggaaatgggtgtactacccgaaattgccaaagcagtagaggacatg
gaatggacattaccaacagatgttcaagcggaagcagttcctctgatcctggggggtgga
gatgttctgatggctgcagaaactgggagtggcaaaacaggagctttctgtttaccaata
ctgcaaactgtatgggaaactctgaaagatttggagtctggcaagactaagacatcacaa
atcaatgcactatcatctccacactggtcaatgagtttgtttgaccgtggctcggcatta
gccgtaaccccagatggtttacgatgtcaaagtcgcgaacaacgtgaatggcatggttgt
cgtgcaacaaagggtgtgcaaggcactggaaaattttactacgaagctacagtcactgac
gagggactctgtcgtgtcggttggtccagtcaggatgcaagtctggatttgggtacagat
agatttggatttgggttcggtggaactggtaaaaagtcgaatgccaggcagtttgatgac
tatggcgagccttttggaatgcatgacgttataggctgcctgttggacttaacaaaagga
gaaatacggttcacaaaaaatggtatcgacttaggccaggcatttgctttatctgcccag
caaaaattgctgaccttttatccagctgttgttctgaaaaatgccgaaatggcattcaat
tttggtgctcaacctttcaaacaccagcctcctgaaggttttattgccgtatcaaccgcc
cctaaaggatatatccgagacaacgttgtatcaggaagcaggagtactacagataatcta
aaaccatccaataatgccccacaggcaataatcattgaaccgtctcgcgagttggctgag
caaactttcaaccaaatacaaaagttcaaaaaacatctgaaagatccagtagtacgagag
ctactagtgattgggggagtcaatgtgaaagaccaaatttctgtactcaatactggggtt
cacatagttgttggaacacctggtcgattggaagatctcatacagggtggctatatgtct
ctaacacaatgcagatttttcgtgctcgatgaagctgacgggttgttgaaacagggatac
acagaattgatcgaccgtctgcatcgacaaatcccaaagatcacgtgtgatggcaggcga
ttgcaaatgatcgtttgctcagctactctacacgcttttgaagtcaaaaaattggcggag
cgtttgatgcactttccgacatgggttgacctcaaaggcgaagacgcggttccggaaact
gttcatcacgtagtggtcatggtagatcctcagaaagataaatcttggtacacttcaaaa
tggcacgttcaaacagacggagtacattctcgggataatgtacagccaggaaacaataca
gcagaaactctatccgaagcggtcaaaattttgaaaggagaatattgtgtcagagcgata
aaggaacataaaatggatcgggcgctaatcttttgccggactaaacttgattgtgataac
ttggagaaatatctcaagagtgttggaggtgccgaattctcgtgcgtgtgtcttcacgga
gatcgcaatccacaggagcgtaaggcaaacctagctaagtttaagcaacaggaagtcaag
tttttaatttgcaccgacgttgctgctaggggattagatatcaccggacttcctttcatg
attaacatcaccctaccggatgaaaagtcaaattacgtacataggatcgggagggtgggt
agagctgaaagaatgggtttagccatctctctagtgggcagtgtaccagaaaaggtttgg
tatcacggcagttggtgttcctccagagggacaaggtgcagcaatgtcaatctaacggat
caaggtggctgctgcatctggtacaacgagatcaaatatttaggggaaatcgaagaccac
ctgaatgtgacgatacagcaggtggaacctgatatcaaaattccggtgaacgagtttgat
ggaaaagtcatttatggagagaagaaggtagctgttgggagcgattacaagaatcatgtg
acacaaatggctccaattgtttcgcaattggcgactcttgaatcacaggcacagctgatg
tatttgaagaggcaactgaacaataataaacaattcttaaccacccgtgcatga
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