Athalia rosae (coleseed sawfly): 105691883
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Entry
105691883 CDS
T09776
Name
(RefSeq) hypoxia-inducible factor 1-alpha isoform X3
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
aroa
Athalia rosae (coleseed sawfly)
Pathway
aroa04137
Mitophagy - animal
aroa04140
Autophagy - animal
aroa04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
105691883
04137 Mitophagy - animal
105691883
04148 Efferocytosis
105691883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aroa03000
]
105691883
Transcription factors [BR:
aroa03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
105691883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS
PAS_3
PAS_11
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
105691883
NCBI-ProteinID:
XP_012266101
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All DBs
Position
3:15331991..15365200
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AA seq
1021 aa
AA seq
DB search
MRQTSDMETNKKSTKPKEKRRSNEKRKEKSRDAARCRRSRETDIFLELAGALPVPVDQAK
LLDKASVMRLAIAYLKVRTVIDAVPEPLTKREPSPDMDGLFLKALDGFMMVLSSDGDIVY
LSENVSDYLGVSQMDMMGQNVYDYSHPCDHEELGECLSVKPSADHRNLCNLFLRLKCTLT
SKGRKVNLKSASYKVIHCTGHMVITPRDLSAPPVLSEDNEDSSGASAEEGEPNEKKNTET
GGCLVLVGCPIPHPSNIEVPLGQQTFLSKHSLNMKFTYADDKLAEYLGWDTSELVGQSLF
EFHHALDNLVLDKSFKCLFSKGQCETAAYRFLGKKGGYAWVVTQATLIHCAKQHKPLSVV
CVNYIVSGVECKNEVYSVRQLEARSVDAAAISLEEKEEEIDSTAASSYPVALVATVAVVK
NEETRPAADRLLLNSLSIPVPIQQQKDRSKPLSVTASLFSQQDKPHKDFVASKKVLDPQK
EEFLTNKPVSITKKIISANEQQRTRPLSVTKSIFAPAPQVVLEPTPGRPQPQTATASIFA
PRTKEMNKGFLTFSEDQPGLTMLKDEPEDLTHLAPTPGDVCVPLEDTPFLSDMLDEFILG
NDNYCPLLSPGLPNELRTSDLGDSLRDSELGDSLADSDPFMHRDSPSPCLSSGTPNLLSP
AFSKSPGSIDSLCSPTGSGGGLSEDEMLMLSIGDVLADEELALRAPYIPMSDQDEALQLL
ISDDMVMWGPSQPPDKKTKWSTNSIEKCSDSNVSSSLEQLLRTNCSSSPSGGGGAKKCND
HGGGLVDPTDALGHAYKKNTRAENWLPKSERNSQKRIHTTSSLNPDNENKRIKCDQKISS
CLLNDQIRSTNCLTSDQQSSQLLQQLMAQQSPTKNCSVGGGGGGGTNGCGTDNNLRSANA
TLQQQQSNSVLMNLLVSGCDEMIDPRNIPPLIHQEMSPLSVDLDNNVVPQMPSNLILEHQ
LSPDTRNELMNSMPLKTKPDVHQEVLPMDFDNFDLDVNSFCPELVQNSDLLIKILANNLV
Q
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgcgccaaacaagtgatatggagactaataaaaagtcgaccaaaccaaaggaaaaacga
cgaagtaatgaaaaacggaaggagaaatcgcgtgacgctgcgcggtgcaggcgtagcagg
gagaccgatatttttttggaattggccggagctcttccggtaccggtcgaccaagccaag
cttctcgacaaagccagcgttatgcgtcttgccatcgcttatctcaaagttcgcacagta
atcgatgccgtaccggaaccgttgaccaaacgagaaccatcgccggacatggacgggcta
ttcctcaaggcactcgacggtttcatgatggttctgtccagcgacggggacatagtttat
ctgtcggaaaacgtcagcgattacctcggagtttctcagatggacatgatgggtcagaac
gtatacgactacagccacccctgcgatcacgaagaactcggcgaatgtctatcggtcaag
ccgtcggccgaccacagaaatctctgcaatctatttctccgactgaaatgtactctcacc
agcaagggcagaaaagtcaatctgaagagcgcctcgtacaaggtgatccactgcacgggg
cacatggtaatcactcctcgcgatttgtcggcacctccggtcctcagtgaggacaacgag
gacagttcgggggcatcggcggaggaaggcgaaccgaacgagaaaaaaaataccgaaacg
ggtgggtgtctcgtactcgttggctgccccatcccgcaccccagtaacatcgaggtgccc
ctgggacagcagactttcttatcgaagcacagcctcaacatgaaattcacctacgccgac
gacaaattggcggagtacctgggctgggatacgagcgaactggtcggtcagtcactcttc
gaatttcaccacgccctcgacaacctggtgctcgacaaatccttcaagtgcctgttcagc
aagggtcaatgcgaaactgcggcctaccgtttccttgggaaaaaaggcggttacgcgtgg
gtggtgacgcaagcgactctgatccactgtgctaaacaacacaaaccgctctccgtcgtc
tgcgtgaattacatcgtaagtggtgtcgagtgcaaaaatgaagtgtacagcgtccgtcag
ctggaggcgcgctccgtagatgcagcagcgatttctttggaagaaaaagaagaggaaata
gattcaaccgcggcttcctcgtatccggtggctctcgtcgcaactgtggctgtcgtgaag
aacgaagagacacgtcccgcggccgatcgattgttattgaattcgttatcgattccggta
ccgattcagcaacaaaaagatcgcagcaaaccgctatcggttacagcgtctctgttcagc
cagcaagataaaccgcataaagattttgtcgcttctaaaaaagtattggatccgcagaaa
gaagaatttttaacgaataaaccggtgtcaattaccaagaagataatatcggctaacgaa
cagcagagaacgagaccattgtcggttactaaaagcatttttgcaccagccccgcaagtt
gttcttgaacctactcccggcagacctcaacctcaaaccgccactgcgagtatattcgcg
ccacgcacgaaggagatgaacaagggcttcctcaccttcagcgaagaccaacctggcctt
accatgttgaaggatgaaccggaggacttgacccaccttgcgccgacacctggcgacgtt
tgcgtacccctagaagacacgccattcctttcagatatgctggatgaattcattttagga
aatgacaattactgcccacttttaagcccgggtttacccaacgaattgaggacctccgac
ctcggcgattcgctgagggatagcgaactcggcgattctttggccgatagcgatcccttc
atgcacagggattcccctagtccatgtctatccagtggaacgccgaaccttctctcgccg
gcgttcagcaagagcccggggagcatagactctctttgtagccccaccgggagcggtggc
ggattgtcggaggatgaaatgctgatgctaagcatcggagatgtcctcgcggacgaggaa
ctcgctttgagggcaccctacataccaatgtccgaccaggacgaagctctacaactcctg
ataagcgacgacatggtaatgtggggaccctcgcagccacccgataaaaaaaccaagtgg
tccacgaacagcatcgagaaatgttcggactccaacgttagttcgagtctcgaacagctg
ttgagaacgaattgttcttcatctccgtcggggggaggcggtgctaaaaaatgtaacgac
cacgggggtggtttagtggatccaacggacgccttggggcacgcttacaaaaaaaatacg
agggcggaaaactggttacccaaatctgaacgtaattcgcaaaaacgtattcacacgacg
tcatcgttgaatccagataacgagaataagaggataaaatgcgatcagaaaatttctagt
tgtcttttgaacgatcaaattcgctcgacgaattgccttacgtccgaccagcagagtagc
caactactccagcaactcatggcccagcaatcccctactaaaaattgttcggtgggtggc
ggtggagggggaggcacgaatggctgcggaaccgacaacaatttacgctctgcaaacgcg
actctgcaacaacagcagtcgaacagcgttttgatgaaccttttggtatcgggatgcgac
gagatgatcgacccccgcaacatcccgcccttgatccatcaggaaatgtcgccgttgagc
gtcgatttggataacaacgtcgtcccccagatgccatcgaatttaattttggaacaccag
ctcagccctgataccagaaatgagctgatgaattctatgcccctcaaaaccaagccggat
gttcatcaggaagtgttgccgatggatttcgacaactttgatttggacgttaattccttc
tgccccgaactcgtacagaactcggatctgctcataaaaatcctcgccaataacttagtg
cagtag
DBGET
integrated database retrieval system
